RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 RHOXF1Q8NHV9 184 aa12.85□□□□□ -0.35
SLC28A1-201ENST00000286749 C2orf15Q8WU43 125 aaKnown RBP12.85□□□□□ -0.35
SLC28A1-201ENST00000286749 SKA2Q8WVK7 121 aaPredicted RBP12.85□□□□□ -0.35
SLC28A1-201ENST00000286749 APH1BQ8WW43 257 aa12.85□□□□□ -0.35
SLC28A1-201ENST00000286749 REEP1Q9H902 201 aa12.85□□□□□ -0.35
SLC28A1-201ENST00000286749 ZBTB20Q9HC78 741 aaPredicted RBP12.85□□□□□ -0.35
SLC28A1-201ENST00000286749 PRDM8Q9NQV8 689 aa12.85□□□□□ -0.35
SLC28A1-201ENST00000286749 KCTD5Q9NXV2 234 aa12.85□□□□□ -0.35
SLC28A1-201ENST00000286749 ZNF229Q9UJW7 825 aa12.85□□□□□ -0.35
SLC28A1-201ENST00000286749 VPS4AQ9UN37 437 aa12.85□□□□□ -0.35
SLC28A1-201ENST00000286749 CPSF4O95639 269 aaKnown RBP12.84□□□□□ -0.35
SLC28A1-201ENST00000286749 AMD1P17707 334 aa12.84□□□□□ -0.35
SLC28A1-201ENST00000286749 EFNA1P20827 205 aaPredicted RBP12.84□□□□□ -0.35
SLC28A1-201ENST00000286749 SPAM1P38567 509 aa12.84□□□□□ -0.35
SLC28A1-201ENST00000286749 EIF2DP41214 584 aaKnown RBP12.84□□□□□ -0.35
SLC28A1-201ENST00000286749 CLK1P49759 484 aaKnown RBP12.84□□□□□ -0.35
SLC28A1-201ENST00000286749 ZNF157P51786 506 aaPredicted RBP12.84□□□□□ -0.35
SLC28A1-201ENST00000286749 PPP5CP53041 499 aa12.84□□□□□ -0.35
SLC28A1-201ENST00000286749 BCL2L1Q07817 233 aa12.84□□□□□ -0.35
SLC28A1-201ENST00000286749 FADDQ13158 208 aa12.84□□□□□ -0.35
SLC28A1-201ENST00000286749 CDKN3Q16667 212 aa12.84□□□□□ -0.35
SLC28A1-201ENST00000286749 PROX2Q3B8N5 592 aa12.84□□□□□ -0.35
SLC28A1-201ENST00000286749 PLEKHG6Q3KR16 790 aa12.84□□□□□ -0.35
SLC28A1-201ENST00000286749 LYPLAL1Q5VWZ2 237 aa12.84□□□□□ -0.35
SLC28A1-201ENST00000286749 NOXRED1Q6NXP6 359 aa12.84□□□□□ -0.35
SLC28A1-201ENST00000286749 TMEM53Q6P2H8 277 aa12.84□□□□□ -0.35
SLC28A1-201ENST00000286749 ANKS3Q6ZW76 656 aa12.84□□□□□ -0.35
SLC28A1-201ENST00000286749 UBE2R2Q712K3 238 aaPredicted RBP12.84□□□□□ -0.35
SLC28A1-201ENST00000286749 TSPAN33Q86UF1 283 aa12.84□□□□□ -0.35
SLC28A1-201ENST00000286749 ENTHD1Q8IYW4 607 aa12.84□□□□□ -0.35
SLC28A1-201ENST00000286749 FBXO22Q8NEZ5 403 aa12.84□□□□□ -0.35
SLC28A1-201ENST00000286749 DNASE1L2Q92874 299 aa12.84□□□□□ -0.35
SLC28A1-201ENST00000286749 TPD52L3Q96J77 140 aa12.84□□□□□ -0.35
SLC28A1-201ENST00000286749 HHIPQ96QV1 700 aa12.84□□□□□ -0.35
SLC28A1-201ENST00000286749 TTPALQ9BTX7 342 aa12.84□□□□□ -0.35
SLC28A1-201ENST00000286749 DCSTAMPQ9H295 470 aa12.84□□□□□ -0.35
SLC28A1-201ENST00000286749 ABCB10Q9NRK6 738 aa12.84□□□□□ -0.35
SLC28A1-201ENST00000286749 SLCO3A1Q9UIG8 710 aa12.84□□□□□ -0.35
SLC28A1-201ENST00000286749 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.84□□□□□ -0.35
SLC28A1-201ENST00000286749 OR51B4Q9Y5P0 310 aa12.84□□□□□ -0.35
SLC28A1-201ENST00000286749 CLDN24A6NM45 220 aa12.84□□□□□ -0.35
SLC28A1-201ENST00000286749 EPN2O95208 641 aa12.84□□□□□ -0.35
SLC28A1-201ENST00000286749 HMGA1P17096 107 aaKnown RBP12.84□□□□□ -0.35
SLC28A1-201ENST00000286749 CCR7P32248 378 aa12.84□□□□□ -0.35
SLC28A1-201ENST00000286749 LIPAP38571 399 aa12.84□□□□□ -0.35
SLC28A1-201ENST00000286749 ALDH7A1P49419 539 aaKnown RBP12.84□□□□□ -0.35
SLC28A1-201ENST00000286749 ITGA1P56199 1179 aa12.84□□□□□ -0.35
SLC28A1-201ENST00000286749 SLC13A2Q13183 592 aa12.84□□□□□ -0.35
SLC28A1-201ENST00000286749 CRHR2Q13324 411 aa12.84□□□□□ -0.35
SLC28A1-201ENST00000286749 CAMK2GQ13555 558 aaPredicted RBP12.84□□□□□ -0.35
SLC28A1-201ENST00000286749 PRSS36Q5K4E3 855 aa12.84□□□□□ -0.35
SLC28A1-201ENST00000286749 CST9Q5W186 159 aa12.84□□□□□ -0.35
SLC28A1-201ENST00000286749 FAHD1Q6P587 224 aa12.84□□□□□ -0.35
SLC28A1-201ENST00000286749 ZNF783Q6ZMS7 281 aa12.84□□□□□ -0.35
SLC28A1-201ENST00000286749 Q6ZPB1 254 aaPredicted RBP12.84□□□□□ -0.35
SLC28A1-201ENST00000286749 CBLL1Q75N03 491 aa12.84□□□□□ -0.35
SLC28A1-201ENST00000286749 IFNL1Q8IU54 200 aa12.84□□□□□ -0.35
SLC28A1-201ENST00000286749 CLECL1Q8IZS7 167 aa12.84□□□□□ -0.35
SLC28A1-201ENST00000286749 GPR26Q8NDV2 337 aa12.84□□□□□ -0.35
SLC28A1-201ENST00000286749 CDC26Q8NHZ8 85 aa12.84□□□□□ -0.35
SLC28A1-201ENST00000286749 BCL7CQ8WUZ0 217 aaPredicted RBP12.84□□□□□ -0.35
SLC28A1-201ENST00000286749 IPCEF1Q8WWN9 437 aaPredicted RBP12.84□□□□□ -0.35
SLC28A1-201ENST00000286749 SIGLEC11Q96RL6 698 aa12.84□□□□□ -0.35
SLC28A1-201ENST00000286749 PITX2Q99697 317 aa12.84□□□□□ -0.35
SLC28A1-201ENST00000286749 KLF16Q9BXK1 252 aaPredicted RBP12.84□□□□□ -0.35
SLC28A1-201ENST00000286749 TRPM5Q9NZQ8 1165 aa12.84□□□□□ -0.35
SLC28A1-201ENST00000286749 ERVK-11Q9UQG0 969 aa12.84□□□□□ -0.35
SLC28A1-201ENST00000286749 MANSC4A6NHS7 340 aaPredicted RBP12.83□□□□□ -0.36
SLC28A1-201ENST00000286749 MAGEB17A8MXT2 336 aa12.83□□□□□ -0.36
SLC28A1-201ENST00000286749 MYO1DO94832 1006 aa12.83□□□□□ -0.36
SLC28A1-201ENST00000286749 COL6A1P12109 1028 aa12.83□□□□□ -0.36
SLC28A1-201ENST00000286749 PRPH2P23942 346 aa12.83□□□□□ -0.36
SLC28A1-201ENST00000286749 PPP3CCP48454 512 aa12.83□□□□□ -0.36
SLC28A1-201ENST00000286749 TRPC1P48995 793 aa12.83□□□□□ -0.36
SLC28A1-201ENST00000286749 FLT3LGP49771 235 aa12.83□□□□□ -0.36
SLC28A1-201ENST00000286749 PLD1Q13393 1074 aa12.83□□□□□ -0.36
SLC28A1-201ENST00000286749 UGT8Q16880 541 aa12.83□□□□□ -0.36
SLC28A1-201ENST00000286749 PTCHD3Q3KNS1 767 aa12.83□□□□□ -0.36
SLC28A1-201ENST00000286749 NEK5Q6P3R8 708 aa12.83□□□□□ -0.36
SLC28A1-201ENST00000286749 EIF3MQ7L2H7 374 aaKnown RBP12.83□□□□□ -0.36
SLC28A1-201ENST00000286749 LRRC70Q7Z2Q7 622 aa12.83□□□□□ -0.36
SLC28A1-201ENST00000286749 SYT12Q8IV01 421 aa12.83□□□□□ -0.36
SLC28A1-201ENST00000286749 APCDD1Q8J025 514 aa12.83□□□□□ -0.36
SLC28A1-201ENST00000286749 PGBD3Q8N328 593 aa12.83□□□□□ -0.36
SLC28A1-201ENST00000286749 SLC38A4Q969I6 547 aa12.83□□□□□ -0.36
SLC28A1-201ENST00000286749 CASD1Q96PB1 797 aa12.83□□□□□ -0.36
SLC28A1-201ENST00000286749 ITPAQ9BY32 194 aa12.83□□□□□ -0.36
SLC28A1-201ENST00000286749 ANKMY1Q9P2S6 941 aa12.83□□□□□ -0.36
SLC28A1-201ENST00000286749 TMED5Q9Y3A6 229 aa12.83□□□□□ -0.36
SLC28A1-201ENST00000286749 AIREO43918 545 aa12.83□□□□□ -0.36
SLC28A1-201ENST00000286749 MRPS14O60783 128 aaKnown RBP12.83□□□□□ -0.36
SLC28A1-201ENST00000286749 PRAMEF4O60810 478 aa12.83□□□□□ -0.36
SLC28A1-201ENST00000286749 VIPP01282 170 aa12.83□□□□□ -0.36
SLC28A1-201ENST00000286749 GPX2P18283 190 aa12.83□□□□□ -0.36
SLC28A1-201ENST00000286749 ITPKAP23677 461 aa12.83□□□□□ -0.36
SLC28A1-201ENST00000286749 SERPINB1P30740 379 aa12.83□□□□□ -0.36
SLC28A1-201ENST00000286749 OR1D2P34982 312 aa12.83□□□□□ -0.36
SLC28A1-201ENST00000286749 WNT3P56703 355 aa12.83□□□□□ -0.36
SLC28A1-201ENST00000286749 ZXDBP98169 803 aa12.83□□□□□ -0.36
SLC28A1-201ENST00000286749 MTAPQ13126 283 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms