RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 ISM1B1AKI9 464 aa18.22■□□□□ 0.51
PDLIM3-202ENST00000284770 NUDT21O43809 227 aaKnown RBP18.22■□□□□ 0.51
PDLIM3-202ENST00000284770 CHEK2O96017 543 aa18.22■□□□□ 0.51
PDLIM3-202ENST00000284770 C1GALT1C1LP0DN25 315 aa18.22■□□□□ 0.51
PDLIM3-202ENST00000284770 JUPP14923 745 aa18.22■□□□□ 0.51
PDLIM3-202ENST00000284770 INHBCP55103 352 aa18.22■□□□□ 0.51
PDLIM3-202ENST00000284770 HNRNPH2P55795 449 aaKnown RBP18.22■□□□□ 0.51
PDLIM3-202ENST00000284770 YBX1P67809 324 aaKnown RBP18.22■□□□□ 0.51
PDLIM3-202ENST00000284770 BTKQ06187 659 aa18.22■□□□□ 0.51
PDLIM3-202ENST00000284770 SF1Q15637 639 aaKnown RBP18.22■□□□□ 0.51
PDLIM3-202ENST00000284770 CATSPEREQ5SY80 951 aa18.22■□□□□ 0.51
PDLIM3-202ENST00000284770 NXPE4Q6UWF7 544 aa18.22■□□□□ 0.51
PDLIM3-202ENST00000284770 OR10G6Q8NH81 332 aa18.22■□□□□ 0.51
PDLIM3-202ENST00000284770 PTCD3Q96EY7 689 aaKnown RBP18.22■□□□□ 0.51
PDLIM3-202ENST00000284770 RILPQ96NA2 401 aa18.22■□□□□ 0.51
PDLIM3-202ENST00000284770 SLC29A3Q9BZD2 475 aa18.22■□□□□ 0.51
PDLIM3-202ENST00000284770 LRIT1Q9P2V4 623 aa18.22■□□□□ 0.51
PDLIM3-202ENST00000284770 ENTPD2Q9Y5L3 495 aa18.22■□□□□ 0.51
PDLIM3-202ENST00000284770 KCNE1BA0A087WTH5 132 aa18.22■□□□□ 0.51
PDLIM3-202ENST00000284770 TRPC5OSA6NMA1 111 aa18.22■□□□□ 0.51
PDLIM3-202ENST00000284770 RHPN2P1A8MT19 583 aa18.22■□□□□ 0.51
PDLIM3-202ENST00000284770 ZNF806P0C7X5 589 aa18.22■□□□□ 0.51
PDLIM3-202ENST00000284770 ZNF883P0CG24 379 aa18.22■□□□□ 0.51
PDLIM3-202ENST00000284770 CDH1P12830 882 aa18.22■□□□□ 0.51
PDLIM3-202ENST00000284770 GLB1P16278 677 aa18.22■□□□□ 0.51
PDLIM3-202ENST00000284770 POLR2CP19387 275 aaPredicted RBP18.22■□□□□ 0.51
PDLIM3-202ENST00000284770 CD22P20273 847 aa18.22■□□□□ 0.51
PDLIM3-202ENST00000284770 HMOX2P30519 316 aa18.22■□□□□ 0.51
PDLIM3-202ENST00000284770 HNF4AP41235 474 aa18.22■□□□□ 0.51
PDLIM3-202ENST00000284770 ABATP80404 500 aa18.22■□□□□ 0.51
PDLIM3-202ENST00000284770 CPSF6Q16630 551 aaKnown RBP eCLIP18.22■□□□□ 0.51
PDLIM3-202ENST00000284770 GALNTL6Q49A17 601 aa18.22■□□□□ 0.51
PDLIM3-202ENST00000284770 GRHL2Q6ISB3 625 aa18.22■□□□□ 0.51
PDLIM3-202ENST00000284770 EFL1Q7Z2Z2 1120 aaKnown RBP18.22■□□□□ 0.51
PDLIM3-202ENST00000284770 CLNKQ7Z7G1 428 aa18.22■□□□□ 0.51
PDLIM3-202ENST00000284770 FAM181AQ8N9Y4 354 aa18.22■□□□□ 0.51
PDLIM3-202ENST00000284770 ABHD11Q8NFV4 315 aa18.22■□□□□ 0.51
PDLIM3-202ENST00000284770 OR2L3Q8NG85 312 aa18.22■□□□□ 0.51
PDLIM3-202ENST00000284770 TWIST2Q8WVJ9 160 aa18.22■□□□□ 0.51
PDLIM3-202ENST00000284770 PRR11Q96HE9 360 aaPredicted RBP18.22■□□□□ 0.51
PDLIM3-202ENST00000284770 OR52B2Q96RD2 323 aa18.22■□□□□ 0.51
PDLIM3-202ENST00000284770 EFCAB11Q9BUY7 163 aa18.22■□□□□ 0.51
PDLIM3-202ENST00000284770 NMUR2Q9GZQ4 415 aa18.22■□□□□ 0.51
PDLIM3-202ENST00000284770 IRF2BPLQ9H1B7 796 aa18.22■□□□□ 0.51
PDLIM3-202ENST00000284770 WDR55Q9H6Y2 383 aaPredicted RBP18.22■□□□□ 0.51
PDLIM3-202ENST00000284770 MEAF6Q9HAF1 191 aa18.22■□□□□ 0.51
PDLIM3-202ENST00000284770 HRASLS2Q9NWW9 162 aa18.22■□□□□ 0.51
PDLIM3-202ENST00000284770 RNF215Q9Y6U7 377 aa18.22■□□□□ 0.51
PDLIM3-202ENST00000284770 CABIN1Q9Y6J0 2220 aa18.21■□□□□ 0.51
PDLIM3-202ENST00000284770 CACNA1HO95180 2353 aa18.21■□□□□ 0.51
PDLIM3-202ENST00000284770 LNP1A1A4G5 178 aa18.21■□□□□ 0.51
PDLIM3-202ENST00000284770 OR5K3A6NET4 321 aa18.21■□□□□ 0.51
PDLIM3-202ENST00000284770 SDHDO14521 159 aa18.21■□□□□ 0.51
PDLIM3-202ENST00000284770 SKAP2O75563 359 aaPredicted RBP18.21■□□□□ 0.51
PDLIM3-202ENST00000284770 UBXN7O94888 489 aa18.21■□□□□ 0.51
PDLIM3-202ENST00000284770 UBOX5O94941 541 aa18.21■□□□□ 0.51
PDLIM3-202ENST00000284770 CCNDBP1O95273 360 aa18.21■□□□□ 0.51
PDLIM3-202ENST00000284770 VARSP26640 1264 aaKnown RBP18.21■□□□□ 0.51
PDLIM3-202ENST00000284770 EPHA3P29320 983 aa18.21■□□□□ 0.51
PDLIM3-202ENST00000284770 SPRED3Q2MJR0 410 aa18.21■□□□□ 0.51
PDLIM3-202ENST00000284770 KLHL35Q6PF15 583 aa18.21■□□□□ 0.51
PDLIM3-202ENST00000284770 CCDC121Q6ZUS5 278 aa18.21■□□□□ 0.51
PDLIM3-202ENST00000284770 OOSP2Q86WS3 158 aa18.21■□□□□ 0.51
PDLIM3-202ENST00000284770 GBP7Q8N8V2 638 aaPredicted RBP18.21■□□□□ 0.51
PDLIM3-202ENST00000284770 FLVCR1-AS1Q8TAF5 88 aa18.21■□□□□ 0.51
PDLIM3-202ENST00000284770 PPP1R36Q96LQ0 422 aa18.21■□□□□ 0.51
PDLIM3-202ENST00000284770 OR2A14Q96R47 310 aa18.21■□□□□ 0.51
PDLIM3-202ENST00000284770 PELI2Q9HAT8 420 aa18.21■□□□□ 0.51
PDLIM3-202ENST00000284770 MRPS30Q9NP92 439 aaKnown RBP18.21■□□□□ 0.51
PDLIM3-202ENST00000284770 TCF7L2Q9NQB0 619 aa18.21■□□□□ 0.51
PDLIM3-202ENST00000284770 CUEDC1Q9NWM3 386 aaPredicted RBP18.21■□□□□ 0.51
PDLIM3-202ENST00000284770 ACTR10Q9NZ32 417 aa18.21■□□□□ 0.51
PDLIM3-202ENST00000284770 ZFP69BQ9UJL9 534 aa18.21■□□□□ 0.51
PDLIM3-202ENST00000284770 PADI4Q9UM07 663 aa18.21■□□□□ 0.51
PDLIM3-202ENST00000284770 PCM1Q15154 2024 aa18.2■□□□□ 0.5
PDLIM3-202ENST00000284770 GSAPA4D1B5 854 aa18.2■□□□□ 0.5
PDLIM3-202ENST00000284770 C2orf74A8MZ97 194 aa18.2■□□□□ 0.5
PDLIM3-202ENST00000284770 FCHO1O14526 889 aa18.2■□□□□ 0.5
PDLIM3-202ENST00000284770 FFAR3O14843 346 aa18.2■□□□□ 0.5
PDLIM3-202ENST00000284770 GPR42O15529 346 aa18.2■□□□□ 0.5
PDLIM3-202ENST00000284770 SIGLEC6O43699 453 aa18.2■□□□□ 0.5
PDLIM3-202ENST00000284770 SERPINA6P08185 405 aa18.2■□□□□ 0.5
PDLIM3-202ENST00000284770 ZRSR2Q15696 482 aaKnown RBP18.2■□□□□ 0.5
PDLIM3-202ENST00000284770 SPDYAQ5MJ70 313 aa18.2■□□□□ 0.5
PDLIM3-202ENST00000284770 TCHHL1Q5QJ38 904 aaPredicted RBP18.2■□□□□ 0.5
PDLIM3-202ENST00000284770 ZNF438Q7Z4V0 828 aa18.2■□□□□ 0.5
PDLIM3-202ENST00000284770 FAM129CQ86XR2 697 aa18.2■□□□□ 0.5
PDLIM3-202ENST00000284770 ATOH1Q92858 354 aaPredicted RBP18.2■□□□□ 0.5
PDLIM3-202ENST00000284770 APOLD1Q96LR9 279 aa18.2■□□□□ 0.5
PDLIM3-202ENST00000284770 CCT7Q99832 543 aa18.2■□□□□ 0.5
PDLIM3-202ENST00000284770 TUBB1Q9H4B7 451 aa18.2■□□□□ 0.5
PDLIM3-202ENST00000284770 GEMIN8Q9NWZ8 242 aaKnown RBP18.2■□□□□ 0.5
PDLIM3-202ENST00000284770 SNX6Q9UNH7 406 aa18.2■□□□□ 0.5
PDLIM3-202ENST00000284770 IGKV1-8A0A0C4DH67 115 aa18.19■□□□□ 0.5
PDLIM3-202ENST00000284770 GOLGA8QA0A0J9YX86 632 aa18.19■□□□□ 0.5
PDLIM3-202ENST00000284770 GOLGA8OA6NCC3 632 aa18.19■□□□□ 0.5
PDLIM3-202ENST00000284770 GOLGA8NF8WBI6 632 aa18.19■□□□□ 0.5
PDLIM3-202ENST00000284770 H0YIV9 168 aa18.19■□□□□ 0.5
PDLIM3-202ENST00000284770 H7BY64 318 aa18.19■□□□□ 0.5
PDLIM3-202ENST00000284770 ULK1O75385 1050 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms