RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 KIAA1456Q9P272 454 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 PTGFRNQ9P2B2 879 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 KLHL9Q9P2J3 617 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 ARPP21Q9UBL0 812 aaPredicted RBP4.45□□□□□ -1.7
CD44-202ENST00000278385 UBQLN2Q9UHD9 624 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 ZNF148Q9UQR1 794 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 SLC27A6Q9Y2P4 619 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 ARAP2Q8WZ64 1704 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 AKAP11Q9UKA4 1901 aa4.44□□□□□ -1.7
CD44-202ENST00000278385 ECM29Q5VYK3 1845 aa4.44□□□□□ -1.7
CD44-202ENST00000278385 PCNTO95613 3336 aa4.44□□□□□ -1.7
CD44-202ENST00000278385 MAGEB16A2A368 324 aa4.44□□□□□ -1.7
CD44-202ENST00000278385 AHRRA9YTQ3 701 aa4.44□□□□□ -1.7
CD44-202ENST00000278385 K7EQM0 130 aa4.44□□□□□ -1.7
CD44-202ENST00000278385 WRBO00258 174 aa4.44□□□□□ -1.7
CD44-202ENST00000278385 KCNJ13O60928 360 aa4.44□□□□□ -1.7
CD44-202ENST00000278385 NIPSNAP2O75323 286 aa4.44□□□□□ -1.7
CD44-202ENST00000278385 SPDEFO95238 335 aa4.44□□□□□ -1.7
CD44-202ENST00000278385 MOCS3O95396 460 aa4.44□□□□□ -1.7
CD44-202ENST00000278385 GNA14O95837 355 aa4.44□□□□□ -1.7
CD44-202ENST00000278385 SERPINA3P01011 423 aa4.44□□□□□ -1.7
CD44-202ENST00000278385 SBK2P0C263 348 aa4.44□□□□□ -1.7
CD44-202ENST00000278385 LINGO3P0C6S8 592 aa4.44□□□□□ -1.7
CD44-202ENST00000278385 CALCBP10092 127 aa4.44□□□□□ -1.7
CD44-202ENST00000278385 ERVK-10P10266 1014 aa4.44□□□□□ -1.7
CD44-202ENST00000278385 CYP2D6P10635 497 aa4.44□□□□□ -1.7
CD44-202ENST00000278385 CCL5P13501 91 aa4.44□□□□□ -1.7
CD44-202ENST00000278385 PFKFB1P16118 471 aa4.44□□□□□ -1.7
CD44-202ENST00000278385 MX1P20591 662 aa4.44□□□□□ -1.7
CD44-202ENST00000278385 DRD1P21728 446 aa4.44□□□□□ -1.7
CD44-202ENST00000278385 GCSHP23434 173 aa4.44□□□□□ -1.7
CD44-202ENST00000278385 PKLRP30613 574 aa4.44□□□□□ -1.7
CD44-202ENST00000278385 UQCRC1P31930 480 aa4.44□□□□□ -1.7
CD44-202ENST00000278385 CDAP32320 146 aa4.44□□□□□ -1.7
CD44-202ENST00000278385 ACVRL1P37023 503 aa4.44□□□□□ -1.7
CD44-202ENST00000278385 SLC11A1P49279 550 aa4.44□□□□□ -1.7
CD44-202ENST00000278385 TOB1P50616 345 aaPredicted RBP4.44□□□□□ -1.7
CD44-202ENST00000278385 RPS6KA3P51812 740 aa4.44□□□□□ -1.7
CD44-202ENST00000278385 BLVRAP53004 296 aa4.44□□□□□ -1.7
CD44-202ENST00000278385 SUCLG1P53597 346 aaKnown RBP4.44□□□□□ -1.7
CD44-202ENST00000278385 PRKAG1P54619 331 aa4.44□□□□□ -1.7
CD44-202ENST00000278385 AIF1P55008 147 aa4.44□□□□□ -1.7
CD44-202ENST00000278385 CDH13P55290 713 aa4.44□□□□□ -1.7
CD44-202ENST00000278385 LILRA4P59901 499 aa4.44□□□□□ -1.7
CD44-202ENST00000278385 GPC5P78333 572 aa4.44□□□□□ -1.7
CD44-202ENST00000278385 SARNPP82979 210 aaKnown RBP4.44□□□□□ -1.7
CD44-202ENST00000278385 ECT2LQ008S8 904 aa4.44□□□□□ -1.7
CD44-202ENST00000278385 GALK2Q01415 458 aa4.44□□□□□ -1.7
CD44-202ENST00000278385 TLE3Q04726 772 aa4.44□□□□□ -1.7
CD44-202ENST00000278385 MTAPQ13126 283 aa4.44□□□□□ -1.7
CD44-202ENST00000278385 FGFBP1Q14512 234 aa4.44□□□□□ -1.7
CD44-202ENST00000278385 KRT31Q15323 416 aa4.44□□□□□ -1.7
CD44-202ENST00000278385 DLG2Q15700 870 aa4.44□□□□□ -1.7
CD44-202ENST00000278385 MAPK11Q15759 364 aa4.44□□□□□ -1.7
CD44-202ENST00000278385 AANATQ16613 207 aa4.44□□□□□ -1.7
CD44-202ENST00000278385 UGCGQ16739 394 aa4.44□□□□□ -1.7
CD44-202ENST00000278385 VWC2Q2TAL6 325 aa4.44□□□□□ -1.7
CD44-202ENST00000278385 USH1GQ495M9 461 aa4.44□□□□□ -1.7
CD44-202ENST00000278385 IQCCQ4KMZ1 466 aa4.44□□□□□ -1.7
CD44-202ENST00000278385 SOWAHCQ53LP3 525 aaPredicted RBP4.44□□□□□ -1.7
CD44-202ENST00000278385 CXorf66Q5JRM2 361 aaPredicted RBP4.44□□□□□ -1.7
CD44-202ENST00000278385 PLAC9Q5JTB6 97 aa4.44□□□□□ -1.7
CD44-202ENST00000278385 DCST1Q5T197 706 aa4.44□□□□□ -1.7
CD44-202ENST00000278385 ARMC12Q5T9G4 340 aa4.44□□□□□ -1.7
CD44-202ENST00000278385 TXNDC8Q6A555 127 aa4.44□□□□□ -1.7
CD44-202ENST00000278385 DHRS7BQ6IAN0 325 aaPredicted RBP4.44□□□□□ -1.7
CD44-202ENST00000278385 CAPRIN2Q6IMN6 1127 aaKnown RBP4.44□□□□□ -1.7
CD44-202ENST00000278385 TMEM88Q6PEY1 159 aa4.44□□□□□ -1.7
CD44-202ENST00000278385 RANBP10Q6VN20 620 aa4.44□□□□□ -1.7
CD44-202ENST00000278385 SYT12Q8IV01 421 aa4.44□□□□□ -1.7
CD44-202ENST00000278385 ZNF444Q8N0Y2 327 aaPredicted RBP4.44□□□□□ -1.7
CD44-202ENST00000278385 TCAIMQ8N3R3 496 aa4.44□□□□□ -1.7
CD44-202ENST00000278385 CPXM2Q8N436 756 aa4.44□□□□□ -1.7
CD44-202ENST00000278385 FADS6Q8N9I5 356 aa4.44□□□□□ -1.7
CD44-202ENST00000278385 SLC17A8Q8NDX2 589 aa4.44□□□□□ -1.7
CD44-202ENST00000278385 SETD9Q8NE22 299 aa4.44□□□□□ -1.7
CD44-202ENST00000278385 OR56B1Q8NGI3 324 aa4.44□□□□□ -1.7
CD44-202ENST00000278385 OR52B4Q8NGK2 314 aa4.44□□□□□ -1.7
CD44-202ENST00000278385 MAFAQ8NHW3 353 aaPredicted RBP4.44□□□□□ -1.7
CD44-202ENST00000278385 ACER1Q8TDN7 264 aa4.44□□□□□ -1.7
CD44-202ENST00000278385 FIG4Q92562 907 aa4.44□□□□□ -1.7
CD44-202ENST00000278385 KCNJ9Q92806 393 aa4.44□□□□□ -1.7
CD44-202ENST00000278385 SPSB1Q96BD6 273 aa4.44□□□□□ -1.7
CD44-202ENST00000278385 DYNLL2Q96FJ2 89 aa4.44□□□□□ -1.7
CD44-202ENST00000278385 BSCL2Q96G97 398 aaPredicted RBP4.44□□□□□ -1.7
CD44-202ENST00000278385 FCRL4Q96PJ5 515 aa4.44□□□□□ -1.7
CD44-202ENST00000278385 ZNF607Q96SK3 696 aa4.44□□□□□ -1.7
CD44-202ENST00000278385 PCYT2Q99447 389 aa4.44□□□□□ -1.7
CD44-202ENST00000278385 LLPHQ9BRT6 129 aaKnown RBP4.44□□□□□ -1.7
CD44-202ENST00000278385 NTMT1Q9BV86 223 aa4.44□□□□□ -1.7
CD44-202ENST00000278385 GON7Q9BXV9 100 aa4.44□□□□□ -1.7
CD44-202ENST00000278385 DDX47Q9H0S4 455 aaKnown RBP4.44□□□□□ -1.7
CD44-202ENST00000278385 UBQLN3Q9H347 655 aa4.44□□□□□ -1.7
CD44-202ENST00000278385 LMAN1LQ9HAT1 526 aa4.44□□□□□ -1.7
CD44-202ENST00000278385 SPACA1Q9HBV2 294 aa4.44□□□□□ -1.7
CD44-202ENST00000278385 GLOD4Q9HC38 313 aa4.44□□□□□ -1.7
CD44-202ENST00000278385 MTRF1LQ9UGC7 380 aaKnown RBP4.44□□□□□ -1.7
CD44-202ENST00000278385 VPS4AQ9UN37 437 aa4.44□□□□□ -1.7
CD44-202ENST00000278385 CHST2Q9Y4C5 530 aa4.44□□□□□ -1.7
CD44-202ENST00000278385 CYP3A7-CYP3A51PA0A087WV96 503 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms