RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 MT-ND2P03891 347 aa8.5□□□□□ -1.05
SCUBE3-201ENST00000274938 AHCYP23526 432 aa8.5□□□□□ -1.05
SCUBE3-201ENST00000274938 GSK3BP49841 420 aa8.5□□□□□ -1.05
SCUBE3-201ENST00000274938 CDH11P55287 796 aa8.5□□□□□ -1.05
SCUBE3-201ENST00000274938 WDR4P57081 412 aaKnown RBP8.5□□□□□ -1.05
SCUBE3-201ENST00000274938 CDK10Q15131 360 aa8.5□□□□□ -1.05
SCUBE3-201ENST00000274938 SLC8B1Q6J4K2 584 aa8.5□□□□□ -1.05
SCUBE3-201ENST00000274938 FAM46DQ8NEK8 389 aa8.5□□□□□ -1.05
SCUBE3-201ENST00000274938 GAL3ST1Q99999 423 aa8.5□□□□□ -1.05
SCUBE3-201ENST00000274938 SLC35A5Q9BS91 424 aa8.5□□□□□ -1.05
SCUBE3-201ENST00000274938 UNKLQ9H9P5 680 aaKnown RBP8.5□□□□□ -1.05
SCUBE3-201ENST00000274938 ITM2CQ9NQX7 267 aa8.5□□□□□ -1.05
SCUBE3-201ENST00000274938 SH2B3Q9UQQ2 575 aa8.5□□□□□ -1.05
SCUBE3-201ENST00000274938 SMIM35A0A1B0GVV1 85 aa8.5□□□□□ -1.05
SCUBE3-201ENST00000274938 AGAP5A6NIR3 686 aa8.5□□□□□ -1.05
SCUBE3-201ENST00000274938 FLRT2O43155 660 aa8.5□□□□□ -1.05
SCUBE3-201ENST00000274938 BPNT1O95861 308 aa8.5□□□□□ -1.05
SCUBE3-201ENST00000274938 ENGP17813 658 aa8.5□□□□□ -1.05
SCUBE3-201ENST00000274938 CORO1AP31146 461 aaKnown RBP8.5□□□□□ -1.05
SCUBE3-201ENST00000274938 PGDP52209 483 aa8.5□□□□□ -1.05
SCUBE3-201ENST00000274938 UBXN11Q5T124 520 aa8.5□□□□□ -1.05
SCUBE3-201ENST00000274938 TNFAIP8L2Q6P589 184 aaPredicted RBP8.5□□□□□ -1.05
SCUBE3-201ENST00000274938 ZNF598Q86UK7 904 aaKnown RBP8.5□□□□□ -1.05
SCUBE3-201ENST00000274938 MFSD2AQ8NA29 543 aa8.5□□□□□ -1.05
SCUBE3-201ENST00000274938 LMLNQ96KR4 655 aa8.5□□□□□ -1.05
SCUBE3-201ENST00000274938 PKP2Q99959 881 aa8.5□□□□□ -1.05
SCUBE3-201ENST00000274938 RPF2Q9H7B2 306 aaKnown RBP8.5□□□□□ -1.05
SCUBE3-201ENST00000274938 ENY2Q9NPA8 101 aa8.5□□□□□ -1.05
SCUBE3-201ENST00000274938 FNIP2Q9P278 1114 aa8.5□□□□□ -1.05
SCUBE3-201ENST00000274938 FKBPLQ9UIM3 349 aa8.5□□□□□ -1.05
SCUBE3-201ENST00000274938 UNC13BO14795 1591 aa8.5□□□□□ -1.05
SCUBE3-201ENST00000274938 TPST2O60704 377 aa8.5□□□□□ -1.05
SCUBE3-201ENST00000274938 CSN2P05814 226 aa8.5□□□□□ -1.05
SCUBE3-201ENST00000274938 HSD11B1P28845 292 aa8.5□□□□□ -1.05
SCUBE3-201ENST00000274938 GRIA2P42262 883 aa8.5□□□□□ -1.05
SCUBE3-201ENST00000274938 CDH15P55291 814 aa8.5□□□□□ -1.05
SCUBE3-201ENST00000274938 TAF10Q12962 218 aa8.5□□□□□ -1.05
SCUBE3-201ENST00000274938 TOR1AIP1Q5JTV8 583 aa8.5□□□□□ -1.05
SCUBE3-201ENST00000274938 SNX29P2Q8IUI4 249 aa8.5□□□□□ -1.05
SCUBE3-201ENST00000274938 EGFL6Q8IUX8 553 aa8.5□□□□□ -1.05
SCUBE3-201ENST00000274938 ELMOD2Q8IZ81 293 aa8.5□□□□□ -1.05
SCUBE3-201ENST00000274938 FIBCD1Q8N539 461 aa8.5□□□□□ -1.05
SCUBE3-201ENST00000274938 NIPA2Q8N8Q9 360 aa8.5□□□□□ -1.05
SCUBE3-201ENST00000274938 NEUROD4Q9HD90 331 aa8.5□□□□□ -1.05
SCUBE3-201ENST00000274938 ACSS2Q9NR19 701 aa8.5□□□□□ -1.05
SCUBE3-201ENST00000274938 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.5□□□□□ -1.05
SCUBE3-201ENST00000274938 ZCCHC3Q9NUD5 404 aaKnown RBP8.5□□□□□ -1.05
SCUBE3-201ENST00000274938 FAM120CQ9NX05 1096 aaKnown RBP8.5□□□□□ -1.05
SCUBE3-201ENST00000274938 VPS29Q9UBQ0 182 aa8.5□□□□□ -1.05
SCUBE3-201ENST00000274938 NUFIP1Q9UHK0 495 aaKnown RBP8.5□□□□□ -1.05
SCUBE3-201ENST00000274938 C2CD4BA6NLJ0 364 aa8.5□□□□□ -1.05
SCUBE3-201ENST00000274938 ZNF726A6NNF4 738 aa8.5□□□□□ -1.05
SCUBE3-201ENST00000274938 NEDD8-MDP1E9PL57 170 aa8.5□□□□□ -1.05
SCUBE3-201ENST00000274938 RNF225M0QZC1 329 aaPredicted RBP8.5□□□□□ -1.05
SCUBE3-201ENST00000274938 MSI1O43347 362 aaKnown RBP8.5□□□□□ -1.05
SCUBE3-201ENST00000274938 NFATC1O95644 943 aa8.5□□□□□ -1.05
SCUBE3-201ENST00000274938 HERV-K104P61576 105 aa8.5□□□□□ -1.05
SCUBE3-201ENST00000274938 NFKB2Q00653 900 aa8.5□□□□□ -1.05
SCUBE3-201ENST00000274938 TBC1D25Q3MII6 688 aa8.5□□□□□ -1.05
SCUBE3-201ENST00000274938 PUS10Q3MIT2 529 aaKnown RBP8.5□□□□□ -1.05
SCUBE3-201ENST00000274938 CHST9Q7L1S5 443 aa8.5□□□□□ -1.05
SCUBE3-201ENST00000274938 ISOC1Q96CN7 298 aa8.5□□□□□ -1.05
SCUBE3-201ENST00000274938 RIPOR3Q96MK2 946 aa8.5□□□□□ -1.05
SCUBE3-201ENST00000274938 ZNF599Q96NL3 588 aa8.5□□□□□ -1.05
SCUBE3-201ENST00000274938 TMED9Q9BVK6 235 aa8.5□□□□□ -1.05
SCUBE3-201ENST00000274938 OSER1Q9NX31 292 aa8.5□□□□□ -1.05
SCUBE3-201ENST00000274938 TRIM64A6NGJ6 449 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 B4GALT5O43286 388 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 XPNPEP2O43895 674 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 RFPL1O75677 317 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 HTR1AP08908 422 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 GFOD2Q3B7J2 385 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 C15orf52Q6ZUT6 534 aaKnown RBP8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 KIF18BQ86Y91 864 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 TSPEARQ8WU66 669 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 FCAMRQ8WWV6 532 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 OR5B12Q96R08 314 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 HEPHQ9BQS7 1158 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 RIOK2Q9BVS4 552 aaKnown RBP8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 AMBNQ9NP70 447 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 B3GAT2Q9NPZ5 323 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 DDX4Q9NQI0 724 aaKnown RBP8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 ZDHHC18Q9NUE0 388 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 DEC1Q9P2X7 70 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 LOC100509620A0A075B734 347 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 A0A1W2PPW3 197 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 LRRC72A6NJI9 287 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 PRKYO43930 277 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 GJA1P17302 382 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 MATN1P21941 496 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 CXCR1P25024 350 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 GABRR2P28476 465 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 SH3D19Q5HYK7 790 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 APOBEC3HQ6NTF7 200 aaKnown RBP8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 IQCHQ86VS3 1027 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 ATP6V1C2Q8NEY4 427 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 OR6K2Q8NGY2 324 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 HCAR2Q8TDS4 363 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 IL4I1Q96RQ9 567 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 B3GNT5Q9BYG0 378 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms