RNA–Protein interactions for RNA: ENST00000272322.8

VPS54-201, Transcript of VPS54, GARP complex subunit, humanhuman

APPRIS P3 TSL 5 BASIC

Gene VPS54, Length 3,463 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS54-201ENST00000272322 SNX5Q9Y5X3 404 aa16.11■□□□□ 0.17
VPS54-201ENST00000272322 FADS2O95864 444 aaKnown RBP16.11■□□□□ 0.17
VPS54-201ENST00000272322 ANXA4P09525 319 aaPredicted RBP16.11■□□□□ 0.17
VPS54-201ENST00000272322 IGFBP5P24593 272 aa16.11■□□□□ 0.17
VPS54-201ENST00000272322 PSMB9P28065 219 aa16.11■□□□□ 0.17
VPS54-201ENST00000272322 CCR3P51677 355 aa16.11■□□□□ 0.17
VPS54-201ENST00000272322 PLA2G16P53816 162 aa16.11■□□□□ 0.17
VPS54-201ENST00000272322 PFN3P60673 137 aa16.11■□□□□ 0.17
VPS54-201ENST00000272322 HTR3DQ70Z44 454 aa16.11■□□□□ 0.17
VPS54-201ENST00000272322 SZRD1Q7Z422 152 aa16.11■□□□□ 0.17
VPS54-201ENST00000272322 MMP21Q8N119 569 aa16.11■□□□□ 0.17
VPS54-201ENST00000272322 C12orf76Q8N812 135 aaPredicted RBP16.11■□□□□ 0.17
VPS54-201ENST00000272322 PAPD5Q8NDF8 572 aaKnown RBP16.11■□□□□ 0.17
VPS54-201ENST00000272322 GIPC3Q8TF64 312 aa16.11■□□□□ 0.17
VPS54-201ENST00000272322 USP7Q93009 1102 aa16.11■□□□□ 0.17
VPS54-201ENST00000272322 AP2M1Q96CW1 435 aa16.11■□□□□ 0.17
VPS54-201ENST00000272322 CSF3RQ99062 836 aa16.11■□□□□ 0.17
VPS54-201ENST00000272322 RMND5AQ9H871 391 aa16.11■□□□□ 0.17
VPS54-201ENST00000272322 TRPS1Q9UHF7 1281 aa16.11■□□□□ 0.17
VPS54-201ENST00000272322 TESMINQ9Y4I5 508 aa16.11■□□□□ 0.17
VPS54-201ENST00000272322 A0A0G2JN53 185 aa16.11■□□□□ 0.17
VPS54-201ENST00000272322 CRHBPP24387 322 aa16.11■□□□□ 0.17
VPS54-201ENST00000272322 HLCSP50747 726 aa16.11■□□□□ 0.17
VPS54-201ENST00000272322 CLDN8P56748 225 aa16.11■□□□□ 0.17
VPS54-201ENST00000272322 UGT8Q16880 541 aa16.11■□□□□ 0.17
VPS54-201ENST00000272322 AGTRAPQ6RW13 159 aa16.11■□□□□ 0.17
VPS54-201ENST00000272322 ZNF852Q6ZMS4 543 aa16.11■□□□□ 0.17
VPS54-201ENST00000272322 ZNF783Q6ZMS7 281 aa16.11■□□□□ 0.17
VPS54-201ENST00000272322 GRASPQ7Z6J2 395 aaPredicted RBP16.11■□□□□ 0.17
VPS54-201ENST00000272322 CHDHQ8NE62 594 aaPredicted RBP16.11■□□□□ 0.17
VPS54-201ENST00000272322 PYURFQ96I23 114 aa16.11■□□□□ 0.17
VPS54-201ENST00000272322 PAWRQ96IZ0 340 aaKnown RBP16.11■□□□□ 0.17
VPS54-201ENST00000272322 OSBPL10Q9BXB5 764 aa16.11■□□□□ 0.17
VPS54-201ENST00000272322 OSBPL6Q9BZF3 934 aa16.11■□□□□ 0.17
VPS54-201ENST00000272322 PAK1IP1Q9NWT1 392 aaPredicted RBP16.11■□□□□ 0.17
VPS54-201ENST00000272322 ERVK-18Q9QC07 812 aa16.11■□□□□ 0.17
VPS54-201ENST00000272322 BCKDKO14874 412 aa16.1■□□□□ 0.17
VPS54-201ENST00000272322 CCNA2P20248 432 aa16.1■□□□□ 0.17
VPS54-201ENST00000272322 FUT4P22083 530 aa16.1■□□□□ 0.17
VPS54-201ENST00000272322 MLLT10P55197 1068 aa16.1■□□□□ 0.17
VPS54-201ENST00000272322 PHEXP78562 749 aa16.1■□□□□ 0.17
VPS54-201ENST00000272322 ITGADQ13349 1161 aa16.1■□□□□ 0.17
VPS54-201ENST00000272322 BTLAQ7Z6A9 289 aa16.1■□□□□ 0.17
VPS54-201ENST00000272322 DCP2Q8IU60 420 aaKnown RBP16.1■□□□□ 0.17
VPS54-201ENST00000272322 SPARTQ8N0X7 666 aa16.1■□□□□ 0.17
VPS54-201ENST00000272322 SLC12A9Q9BXP2 914 aa16.1■□□□□ 0.17
VPS54-201ENST00000272322 VPS29Q9UBQ0 182 aa16.1■□□□□ 0.17
VPS54-201ENST00000272322 STOML2Q9UJZ1 356 aa16.1■□□□□ 0.17
VPS54-201ENST00000272322 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.1■□□□□ 0.17
VPS54-201ENST00000272322 CORINQ9Y5Q5 1042 aa16.1■□□□□ 0.17
VPS54-201ENST00000272322 FRMPD3Q5JV73 1810 aa16.1■□□□□ 0.17
VPS54-201ENST00000272322 MGAT4DA6NG13 374 aa16.1■□□□□ 0.17
VPS54-201ENST00000272322 GRM6O15303 877 aa16.1■□□□□ 0.17
VPS54-201ENST00000272322 CTSLP07711 333 aa16.1■□□□□ 0.17
VPS54-201ENST00000272322 POLR2EP19388 210 aaKnown RBP16.1■□□□□ 0.17
VPS54-201ENST00000272322 NUP107P57740 925 aa16.1■□□□□ 0.17
VPS54-201ENST00000272322 RPS13P62277 151 aaKnown RBP16.1■□□□□ 0.17
VPS54-201ENST00000272322 PERM1Q5SV97 790 aa16.1■□□□□ 0.17
VPS54-201ENST00000272322 BORAQ6PGQ7 559 aa16.1■□□□□ 0.17
VPS54-201ENST00000272322 ELMSAN1Q6PJG2 1045 aa16.1■□□□□ 0.17
VPS54-201ENST00000272322 TMC8Q8IU68 726 aa16.1■□□□□ 0.17
VPS54-201ENST00000272322 RASGEF1AQ8N9B8 481 aa16.1■□□□□ 0.17
VPS54-201ENST00000272322 SMYD1Q8NB12 490 aa16.1■□□□□ 0.17
VPS54-201ENST00000272322 VOPP1Q96AW1 172 aa16.1■□□□□ 0.17
VPS54-201ENST00000272322 SH3GL1Q99961 368 aa16.1■□□□□ 0.17
VPS54-201ENST00000272322 OR2AG1Q9H205 316 aa16.1■□□□□ 0.17
VPS54-201ENST00000272322 TRIM39Q9HCM9 518 aa16.1■□□□□ 0.17
VPS54-201ENST00000272322 C5AR2Q9P296 337 aa16.1■□□□□ 0.17
VPS54-201ENST00000272322 SH2B3Q9UQQ2 575 aa16.1■□□□□ 0.17
VPS54-201ENST00000272322 CFAP99D6REC4 459 aa16.1■□□□□ 0.17
VPS54-201ENST00000272322 EPN2O95208 641 aa16.1■□□□□ 0.17
VPS54-201ENST00000272322 BCL10O95999 233 aa16.1■□□□□ 0.17
VPS54-201ENST00000272322 VIPP01282 170 aa16.1■□□□□ 0.17
VPS54-201ENST00000272322 ELFN1P0C7U0 828 aa16.1■□□□□ 0.17
VPS54-201ENST00000272322 AMD1P17707 334 aa16.1■□□□□ 0.17
VPS54-201ENST00000272322 VIPR2P41587 438 aa16.1■□□□□ 0.17
VPS54-201ENST00000272322 NUDT6P53370 316 aa16.1■□□□□ 0.17
VPS54-201ENST00000272322 WDR5P61964 334 aaKnown RBP16.1■□□□□ 0.17
VPS54-201ENST00000272322 ASZ1Q8WWH4 475 aa16.1■□□□□ 0.17
VPS54-201ENST00000272322 REXO5Q96IC2 774 aaKnown RBP16.1■□□□□ 0.17
VPS54-201ENST00000272322 CPPED1Q9BRF8 314 aaPredicted RBP16.1■□□□□ 0.17
VPS54-201ENST00000272322 MUC13Q9H3R2 512 aa16.1■□□□□ 0.17
VPS54-201ENST00000272322 CERS4Q9HA82 394 aa16.1■□□□□ 0.17
VPS54-201ENST00000272322 TDP1Q9NUW8 608 aa16.1■□□□□ 0.17
VPS54-201ENST00000272322 RHCGQ9UBD6 479 aa16.1■□□□□ 0.17
VPS54-201ENST00000272322 MAP4K5Q9Y4K4 846 aa16.1■□□□□ 0.17
VPS54-201ENST00000272322 ANGPTL1O95841 491 aa16.09■□□□□ 0.17
VPS54-201ENST00000272322 TTC23Q5W5X9 447 aa16.09■□□□□ 0.17
VPS54-201ENST00000272322 CNKSR3Q6P9H4 555 aa16.09■□□□□ 0.17
VPS54-201ENST00000272322 UTS2BQ765I0 119 aa16.09■□□□□ 0.17
VPS54-201ENST00000272322 IRF7Q92985 503 aa16.09■□□□□ 0.17
VPS54-201ENST00000272322 HSH2DQ96JZ2 352 aa16.09■□□□□ 0.17
VPS54-201ENST00000272322 OR4K3Q96R72 315 aa16.09■□□□□ 0.17
VPS54-201ENST00000272322 ROGDIQ9GZN7 287 aa16.09■□□□□ 0.17
VPS54-201ENST00000272322 TMCO1Q9UM00 188 aa16.09■□□□□ 0.17
VPS54-201ENST00000272322 SNX8Q9Y5X2 465 aa16.09■□□□□ 0.17
VPS54-201ENST00000272322 HTR1AP08908 422 aa16.09■□□□□ 0.17
VPS54-201ENST00000272322 SOAT1P35610 550 aa16.09■□□□□ 0.17
VPS54-201ENST00000272322 NNMTP40261 264 aa16.09■□□□□ 0.17
VPS54-201ENST00000272322 WASP42768 502 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms