RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 GPR156Q8NFN8 814 aa11.24□□□□□ -0.61
CLSTN3-201ENST00000266546 POF1BQ8WVV4 589 aa11.24□□□□□ -0.61
CLSTN3-201ENST00000266546 TMEM159Q96B96 161 aa11.24□□□□□ -0.61
CLSTN3-201ENST00000266546 MRM3Q9HC36 420 aaKnown RBP11.24□□□□□ -0.61
CLSTN3-201ENST00000266546 DIABLOQ9NR28 239 aa11.24□□□□□ -0.61
CLSTN3-201ENST00000266546 PRELID1Q9Y255 219 aa11.24□□□□□ -0.61
CLSTN3-201ENST00000266546 ANGPT4Q9Y264 503 aa11.24□□□□□ -0.61
CLSTN3-201ENST00000266546 SPEF1Q9Y4P9 236 aa11.24□□□□□ -0.61
CLSTN3-201ENST00000266546 PCDHB1Q9Y5F3 818 aa11.24□□□□□ -0.61
CLSTN3-201ENST00000266546 KDELR3O43731 214 aa11.23□□□□□ -0.61
CLSTN3-201ENST00000266546 DYRK3O43781 588 aa11.23□□□□□ -0.61
CLSTN3-201ENST00000266546 NIPSNAP2O75323 286 aa11.23□□□□□ -0.61
CLSTN3-201ENST00000266546 DIRAS1O95057 198 aa11.23□□□□□ -0.61
CLSTN3-201ENST00000266546 SLC25A14O95258 325 aaPredicted RBP11.23□□□□□ -0.61
CLSTN3-201ENST00000266546 PRPS2P11908 318 aa11.23□□□□□ -0.61
CLSTN3-201ENST00000266546 POU2F1P14859 743 aa11.23□□□□□ -0.61
CLSTN3-201ENST00000266546 MAGEA3P43357 314 aa11.23□□□□□ -0.61
CLSTN3-201ENST00000266546 LEPRP48357 1165 aaKnown RBP11.23□□□□□ -0.61
CLSTN3-201ENST00000266546 ANXA11P50995 505 aaKnown RBP11.23□□□□□ -0.61
CLSTN3-201ENST00000266546 CDH12P55289 794 aa11.23□□□□□ -0.61
CLSTN3-201ENST00000266546 GABARAPL2P60520 117 aa11.23□□□□□ -0.61
CLSTN3-201ENST00000266546 CD47Q08722 323 aa11.23□□□□□ -0.61
CLSTN3-201ENST00000266546 ACOX1Q15067 660 aa11.23□□□□□ -0.61
CLSTN3-201ENST00000266546 BICRALQ6AI39 1079 aa11.23□□□□□ -0.61
CLSTN3-201ENST00000266546 TRIM40Q6P9F5 258 aa11.23□□□□□ -0.61
CLSTN3-201ENST00000266546 C16orf62Q7Z3J2 963 aa11.23□□□□□ -0.61
CLSTN3-201ENST00000266546 TTC9BQ8N6N2 239 aa11.23□□□□□ -0.61
CLSTN3-201ENST00000266546 NPWQ8N729 165 aa11.23□□□□□ -0.61
CLSTN3-201ENST00000266546 DNAJB8Q8NHS0 232 aa11.23□□□□□ -0.61
CLSTN3-201ENST00000266546 CDKN2AIPNLQ96HQ2 116 aa11.23□□□□□ -0.61
CLSTN3-201ENST00000266546 AARSD1Q9BTE6 412 aaKnown RBP11.23□□□□□ -0.61
CLSTN3-201ENST00000266546 CPNE5Q9HCH3 593 aa11.23□□□□□ -0.61
CLSTN3-201ENST00000266546 GKN1Q9NS71 199 aa11.23□□□□□ -0.61
CLSTN3-201ENST00000266546 KCTD3Q9Y597 815 aa11.23□□□□□ -0.61
CLSTN3-201ENST00000266546 DRGXA6NNA5 263 aa11.23□□□□□ -0.61
CLSTN3-201ENST00000266546 TRBC1P01850 177 aa11.23□□□□□ -0.61
CLSTN3-201ENST00000266546 MT-ND2P03891 347 aa11.23□□□□□ -0.61
CLSTN3-201ENST00000266546 PGRP06401 933 aa11.23□□□□□ -0.61
CLSTN3-201ENST00000266546 CYP2A6P11509 494 aaPredicted RBP11.23□□□□□ -0.61
CLSTN3-201ENST00000266546 FPR1P21462 350 aa11.23□□□□□ -0.61
CLSTN3-201ENST00000266546 FUT4P22083 530 aa11.23□□□□□ -0.61
CLSTN3-201ENST00000266546 NCS1P62166 190 aa11.23□□□□□ -0.61
CLSTN3-201ENST00000266546 SH3BP2P78314 561 aa11.23□□□□□ -0.61
CLSTN3-201ENST00000266546 GALNT1Q10472 559 aaPredicted RBP11.23□□□□□ -0.61
CLSTN3-201ENST00000266546 COQ5Q5HYK3 327 aa11.23□□□□□ -0.61
CLSTN3-201ENST00000266546 CYP4V2Q6ZWL3 525 aaPredicted RBP11.23□□□□□ -0.61
CLSTN3-201ENST00000266546 TAS1R1Q7RTX1 841 aa11.23□□□□□ -0.61
CLSTN3-201ENST00000266546 C11orf65Q8NCR3 313 aa11.23□□□□□ -0.61
CLSTN3-201ENST00000266546 ACVR1CQ8NER5 493 aa11.23□□□□□ -0.61
CLSTN3-201ENST00000266546 OR13J1Q8NGT2 312 aa11.23□□□□□ -0.61
CLSTN3-201ENST00000266546 PYURFQ96I23 114 aa11.23□□□□□ -0.61
CLSTN3-201ENST00000266546 GFM1Q96RP9 751 aaKnown RBP11.23□□□□□ -0.61
CLSTN3-201ENST00000266546 PHOX2BQ99453 314 aa11.23□□□□□ -0.61
CLSTN3-201ENST00000266546 CWH43Q9H720 699 aa11.23□□□□□ -0.61
CLSTN3-201ENST00000266546 CCDC59Q9P031 241 aaKnown RBP11.23□□□□□ -0.61
CLSTN3-201ENST00000266546 KNTC1P50748 2209 aa11.23□□□□□ -0.61
CLSTN3-201ENST00000266546 A0A1B0GTW7 788 aa11.23□□□□□ -0.61
CLSTN3-201ENST00000266546 TBC1D3BA6NDS4 549 aa11.23□□□□□ -0.61
CLSTN3-201ENST00000266546 FABP12A6NFH5 140 aa11.23□□□□□ -0.61
CLSTN3-201ENST00000266546 LRRC14BA6NHZ5 514 aa11.23□□□□□ -0.61
CLSTN3-201ENST00000266546 OR6C70A6NIJ9 312 aa11.23□□□□□ -0.61
CLSTN3-201ENST00000266546 CNTN5O94779 1100 aa11.23□□□□□ -0.61
CLSTN3-201ENST00000266546 ABLIM3O94929 683 aa11.23□□□□□ -0.61
CLSTN3-201ENST00000266546 ADH1CP00326 375 aa11.23□□□□□ -0.61
CLSTN3-201ENST00000266546 PBLDP30039 288 aaPredicted RBP11.23□□□□□ -0.61
CLSTN3-201ENST00000266546 HOXC13P31276 330 aa11.23□□□□□ -0.61
CLSTN3-201ENST00000266546 UGT2B15P54855 530 aa11.23□□□□□ -0.61
CLSTN3-201ENST00000266546 RAB30Q15771 203 aa11.23□□□□□ -0.61
CLSTN3-201ENST00000266546 ZNF181Q2M3W8 571 aa11.23□□□□□ -0.61
CLSTN3-201ENST00000266546 USP39Q53GS9 565 aaKnown RBP11.23□□□□□ -0.61
CLSTN3-201ENST00000266546 NHSL2Q5HYW2 709 aa11.23□□□□□ -0.61
CLSTN3-201ENST00000266546 SIRPB2Q5JXA9 342 aa11.23□□□□□ -0.61
CLSTN3-201ENST00000266546 SPANXN4Q5MJ08 99 aa11.23□□□□□ -0.61
CLSTN3-201ENST00000266546 CPTPQ5TA50 214 aa11.23□□□□□ -0.61
CLSTN3-201ENST00000266546 PPP2R2DQ66LE6 453 aa11.23□□□□□ -0.61
CLSTN3-201ENST00000266546 CDC73Q6P1J9 531 aa11.23□□□□□ -0.61
CLSTN3-201ENST00000266546 CD300LGQ6UXG3 332 aa11.23□□□□□ -0.61
CLSTN3-201ENST00000266546 OTUB2Q96DC9 234 aa11.23□□□□□ -0.61
CLSTN3-201ENST00000266546 SLC22A4Q9H015 551 aa11.23□□□□□ -0.61
CLSTN3-201ENST00000266546 AIG1Q9NVV5 245 aa11.23□□□□□ -0.61
CLSTN3-201ENST00000266546 IL37Q9NZH6 218 aa11.23□□□□□ -0.61
CLSTN3-201ENST00000266546 FKBPLQ9UIM3 349 aa11.23□□□□□ -0.61
CLSTN3-201ENST00000266546 MRPS7Q9Y2R9 242 aaKnown RBP11.23□□□□□ -0.61
CLSTN3-201ENST00000266546 MAFKO60675 156 aa11.22□□□□□ -0.61
CLSTN3-201ENST00000266546 STC2O76061 302 aa11.22□□□□□ -0.61
CLSTN3-201ENST00000266546 ESR1P03372 595 aa11.22□□□□□ -0.61
CLSTN3-201ENST00000266546 CYP4F8P98187 520 aa11.22□□□□□ -0.61
CLSTN3-201ENST00000266546 CD83Q01151 205 aa11.22□□□□□ -0.61
CLSTN3-201ENST00000266546 CAMK2GQ13555 558 aaPredicted RBP11.22□□□□□ -0.61
CLSTN3-201ENST00000266546 FBXO43Q4G163 708 aa11.22□□□□□ -0.61
CLSTN3-201ENST00000266546 XKR6Q5GH73 641 aa11.22□□□□□ -0.61
CLSTN3-201ENST00000266546 LCN1P1Q5VSP4 162 aa11.22□□□□□ -0.61
CLSTN3-201ENST00000266546 TXNDC8Q6A555 127 aa11.22□□□□□ -0.61
CLSTN3-201ENST00000266546 USP45Q70EL2 814 aa11.22□□□□□ -0.61
CLSTN3-201ENST00000266546 SPARTQ8N0X7 666 aa11.22□□□□□ -0.61
CLSTN3-201ENST00000266546 DSN1Q9H410 356 aa11.22□□□□□ -0.61
CLSTN3-201ENST00000266546 CCDC177Q9NQR7 707 aaPredicted RBP11.22□□□□□ -0.61
CLSTN3-201ENST00000266546 PCDHGB3Q9Y5G1 929 aa11.22□□□□□ -0.61
CLSTN3-201ENST00000266546 SPTA1P02549 2419 aa11.22□□□□□ -0.61
CLSTN3-201ENST00000266546 LCHNA4D1U4 455 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms