RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 ITIH1P19827 911 aa16.3■□□□□ 0.2
SQLE-201ENST00000265896 ST13P50502 369 aaKnown RBP16.3■□□□□ 0.2
SQLE-201ENST00000265896 TRIM71Q2Q1W2 868 aaKnown RBP16.3■□□□□ 0.2
SQLE-201ENST00000265896 CCSMST1Q4G0I0 132 aa16.3■□□□□ 0.2
SQLE-201ENST00000265896 ZNF362Q5T0B9 420 aaPredicted RBP16.3■□□□□ 0.2
SQLE-201ENST00000265896 GPRC6AQ5T6X5 926 aa16.3■□□□□ 0.2
SQLE-201ENST00000265896 MFSD4AQ8N468 514 aa16.3■□□□□ 0.2
SQLE-201ENST00000265896 OR4K1Q8NGD4 311 aa16.3■□□□□ 0.2
SQLE-201ENST00000265896 TTPALQ9BTX7 342 aa16.3■□□□□ 0.2
SQLE-201ENST00000265896 ACOT13Q9NPJ3 140 aa16.3■□□□□ 0.2
SQLE-201ENST00000265896 SCN3BQ9NY72 215 aa16.3■□□□□ 0.2
SQLE-201ENST00000265896 GPR83Q9NYM4 423 aa16.3■□□□□ 0.2
SQLE-201ENST00000265896 ACSL6Q9UKU0 697 aa16.3■□□□□ 0.2
SQLE-201ENST00000265896 LRFN2Q9ULH4 789 aa16.3■□□□□ 0.2
SQLE-201ENST00000265896 MYOFQ9NZM1 2061 aa16.3■□□□□ 0.2
SQLE-201ENST00000265896 TMEM202A6NGA9 273 aa16.3■□□□□ 0.2
SQLE-201ENST00000265896 RFXAPO00287 272 aa16.3■□□□□ 0.2
SQLE-201ENST00000265896 CYP7B1O75881 506 aa16.3■□□□□ 0.2
SQLE-201ENST00000265896 HPRP00739 348 aa16.3■□□□□ 0.2
SQLE-201ENST00000265896 KRT6AP02538 564 aa16.3■□□□□ 0.2
SQLE-201ENST00000265896 KRT6BP04259 564 aa16.3■□□□□ 0.2
SQLE-201ENST00000265896 ACRV1P26436 265 aa16.3■□□□□ 0.2
SQLE-201ENST00000265896 PTPN6P29350 595 aa16.3■□□□□ 0.2
SQLE-201ENST00000265896 KIR3DL1P43629 444 aa16.3■□□□□ 0.2
SQLE-201ENST00000265896 KRT6CP48668 564 aa16.3■□□□□ 0.2
SQLE-201ENST00000265896 CYP2U1Q7Z449 544 aa16.3■□□□□ 0.2
SQLE-201ENST00000265896 IFNL1Q8IU54 200 aa16.3■□□□□ 0.2
SQLE-201ENST00000265896 POC5Q8NA72 575 aa16.3■□□□□ 0.2
SQLE-201ENST00000265896 OR5AK3PQ8NH89 298 aa16.3■□□□□ 0.2
SQLE-201ENST00000265896 Q96MT0 163 aa16.3■□□□□ 0.2
SQLE-201ENST00000265896 TRIT1Q9H3H1 467 aaKnown RBP16.3■□□□□ 0.2
SQLE-201ENST00000265896 SH3BP4Q9P0V3 963 aa16.3■□□□□ 0.2
SQLE-201ENST00000265896 EVPLLA8MZ36 301 aa16.29■□□□□ 0.2
SQLE-201ENST00000265896 FAM227AF5H4B4 570 aa16.29■□□□□ 0.2
SQLE-201ENST00000265896 J3KTA2 159 aa16.29■□□□□ 0.2
SQLE-201ENST00000265896 ANXA5P08758 320 aa16.29■□□□□ 0.2
SQLE-201ENST00000265896 GADD45AP24522 165 aa16.29■□□□□ 0.2
SQLE-201ENST00000265896 GZMMP51124 257 aa16.29■□□□□ 0.2
SQLE-201ENST00000265896 ARHGDIAP52565 204 aa16.29■□□□□ 0.2
SQLE-201ENST00000265896 CHIT1Q13231 466 aa16.29■□□□□ 0.2
SQLE-201ENST00000265896 HKDC1Q2TB90 917 aa16.29■□□□□ 0.2
SQLE-201ENST00000265896 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.29■□□□□ 0.2
SQLE-201ENST00000265896 HIPK1Q86Z02 1210 aa16.29■□□□□ 0.2
SQLE-201ENST00000265896 FAM217AQ8IXS0 508 aa16.29■□□□□ 0.2
SQLE-201ENST00000265896 CHCHD6Q9BRQ6 235 aa16.29■□□□□ 0.2
SQLE-201ENST00000265896 DCSTAMPQ9H295 470 aa16.29■□□□□ 0.2
SQLE-201ENST00000265896 DICER1Q9UPY3 1922 aaKnown RBP16.29■□□□□ 0.2
SQLE-201ENST00000265896 MICAL3Q7RTP6 2002 aa16.29■□□□□ 0.2
SQLE-201ENST00000265896 TRBV5-3A0A0A0MS03 114 aa16.29■□□□□ 0.2
SQLE-201ENST00000265896 GABARAPO95166 117 aa16.29■□□□□ 0.2
SQLE-201ENST00000265896 FABP3P05413 133 aa16.29■□□□□ 0.2
SQLE-201ENST00000265896 ZDHHC11BP0C7U3 371 aa16.29■□□□□ 0.2
SQLE-201ENST00000265896 PBLDP30039 288 aaPredicted RBP16.29■□□□□ 0.2
SQLE-201ENST00000265896 RRM2P31350 389 aa16.29■□□□□ 0.2
SQLE-201ENST00000265896 FCGRTP55899 365 aa16.29■□□□□ 0.2
SQLE-201ENST00000265896 B4GALNT1Q00973 533 aa16.29■□□□□ 0.2
SQLE-201ENST00000265896 DGUOKQ16854 277 aa16.29■□□□□ 0.2
SQLE-201ENST00000265896 TMEM53Q6P2H8 277 aa16.29■□□□□ 0.2
SQLE-201ENST00000265896 ZNF852Q6ZMS4 543 aa16.29■□□□□ 0.2
SQLE-201ENST00000265896 STK40Q8N2I9 435 aa16.29■□□□□ 0.2
SQLE-201ENST00000265896 C2orf73Q8N5S3 287 aaPredicted RBP16.29■□□□□ 0.2
SQLE-201ENST00000265896 OR51E2Q9H255 320 aa16.29■□□□□ 0.2
SQLE-201ENST00000265896 TRPM5Q9NZQ8 1165 aa16.29■□□□□ 0.2
SQLE-201ENST00000265896 SYN3O14994 580 aa16.29■□□□□ 0.2
SQLE-201ENST00000265896 WBP4O75554 376 aaKnown RBP16.29■□□□□ 0.2
SQLE-201ENST00000265896 ALOX12P18054 663 aa16.29■□□□□ 0.2
SQLE-201ENST00000265896 POU1F1P28069 291 aa16.29■□□□□ 0.2
SQLE-201ENST00000265896 MRPL58Q14197 206 aaKnown RBP16.29■□□□□ 0.2
SQLE-201ENST00000265896 GANABQ14697 944 aaKnown RBP16.29■□□□□ 0.2
SQLE-201ENST00000265896 SPATS1Q496A3 300 aa16.29■□□□□ 0.2
SQLE-201ENST00000265896 DGKKQ5KSL6 1271 aa16.29■□□□□ 0.2
SQLE-201ENST00000265896 NOXRED1Q6NXP6 359 aa16.29■□□□□ 0.2
SQLE-201ENST00000265896 SNX20Q7Z614 316 aa16.29■□□□□ 0.2
SQLE-201ENST00000265896 DEFB128Q7Z7B8 93 aa16.29■□□□□ 0.2
SQLE-201ENST00000265896 HEATR4Q86WZ0 1026 aa16.29■□□□□ 0.2
SQLE-201ENST00000265896 ST13P5Q8NFI4 369 aaPredicted RBP16.29■□□□□ 0.2
SQLE-201ENST00000265896 SOCS4Q8WXH5 440 aa16.29■□□□□ 0.2
SQLE-201ENST00000265896 SH3GL1Q99961 368 aa16.29■□□□□ 0.2
SQLE-201ENST00000265896 YIPF2Q9BWQ6 316 aa16.29■□□□□ 0.2
SQLE-201ENST00000265896 MROQ9BYG7 248 aa16.29■□□□□ 0.2
SQLE-201ENST00000265896 ATAD3AQ9NVI7 634 aa16.29■□□□□ 0.2
SQLE-201ENST00000265896 OR6C75A6NL08 312 aa16.28■□□□□ 0.2
SQLE-201ENST00000265896 A8MV72 311 aaPredicted RBP16.28■□□□□ 0.2
SQLE-201ENST00000265896 KCNK5O95279 499 aa16.28■□□□□ 0.2
SQLE-201ENST00000265896 GALTP07902 379 aa16.28■□□□□ 0.2
SQLE-201ENST00000265896 HOXD12P35452 270 aa16.28■□□□□ 0.2
SQLE-201ENST00000265896 MAGEA8P43361 318 aa16.28■□□□□ 0.2
SQLE-201ENST00000265896 NRIP1P48552 1158 aa16.28■□□□□ 0.2
SQLE-201ENST00000265896 ACLYP53396 1101 aa16.28■□□□□ 0.2
SQLE-201ENST00000265896 CYP4F8P98187 520 aa16.28■□□□□ 0.2
SQLE-201ENST00000265896 MAD2L1BPQ15013 274 aaPredicted RBP16.28■□□□□ 0.2
SQLE-201ENST00000265896 SHQ1Q6PI26 577 aaKnown RBP16.28■□□□□ 0.2
SQLE-201ENST00000265896 P3H2Q8IVL5 708 aa16.28■□□□□ 0.2
SQLE-201ENST00000265896 SLC44A2Q8IWA5 706 aaPredicted RBP16.28■□□□□ 0.2
SQLE-201ENST00000265896 GTPBP3Q969Y2 492 aaKnown RBP16.28■□□□□ 0.2
SQLE-201ENST00000265896 COPS8Q99627 209 aa16.28■□□□□ 0.2
SQLE-201ENST00000265896 MTG2Q9H4K7 406 aa16.28■□□□□ 0.2
SQLE-201ENST00000265896 C14orf119Q9NWQ9 140 aa16.28■□□□□ 0.2
SQLE-201ENST00000265896 QPCTLQ9NXS2 382 aa16.28■□□□□ 0.2
SQLE-201ENST00000265896 RIMKLBQ9ULI2 386 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms