RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 ST6GAL1P15907 406 aa13.72□□□□□ -0.21
SSBP1-201ENST00000265304 PSMB5P28074 263 aa13.72□□□□□ -0.21
SSBP1-201ENST00000265304 CMPK1P30085 196 aa13.72□□□□□ -0.21
SSBP1-201ENST00000265304 HSD11B2P80365 405 aa13.72□□□□□ -0.21
SSBP1-201ENST00000265304 CDC16Q13042 620 aa13.72□□□□□ -0.21
SSBP1-201ENST00000265304 EIF3IQ13347 325 aaKnown RBP13.72□□□□□ -0.21
SSBP1-201ENST00000265304 ZIC1Q15915 447 aa13.72□□□□□ -0.21
SSBP1-201ENST00000265304 UNC50Q53HI1 259 aa13.72□□□□□ -0.21
SSBP1-201ENST00000265304 ZNF678Q5SXM1 525 aa13.72□□□□□ -0.21
SSBP1-201ENST00000265304 HES3Q5TGS1 186 aa13.72□□□□□ -0.21
SSBP1-201ENST00000265304 CACHD1Q5VU97 1274 aa13.72□□□□□ -0.21
SSBP1-201ENST00000265304 PRAMEF9Q5VWM5 478 aa13.72□□□□□ -0.21
SSBP1-201ENST00000265304 FCRL6Q6DN72 434 aa13.72□□□□□ -0.21
SSBP1-201ENST00000265304 FIGLAQ6QHK4 219 aa13.72□□□□□ -0.21
SSBP1-201ENST00000265304 IGF2-ASQ6U949 168 aa13.72□□□□□ -0.21
SSBP1-201ENST00000265304 PAQR7Q86WK9 346 aa13.72□□□□□ -0.21
SSBP1-201ENST00000265304 C17orf64Q86WR6 236 aa13.72□□□□□ -0.21
SSBP1-201ENST00000265304 DNAJC22Q8N4W6 341 aa13.72□□□□□ -0.21
SSBP1-201ENST00000265304 C2orf73Q8N5S3 287 aaPredicted RBP13.72□□□□□ -0.21
SSBP1-201ENST00000265304 BMPERQ8N8U9 685 aa13.72□□□□□ -0.21
SSBP1-201ENST00000265304 ARMC2Q8NEN0 867 aa13.72□□□□□ -0.21
SSBP1-201ENST00000265304 NEIL2Q969S2 332 aa13.72□□□□□ -0.21
SSBP1-201ENST00000265304 CCDC74BQ96LY2 380 aa13.72□□□□□ -0.21
SSBP1-201ENST00000265304 IQCGQ9H095 443 aaKnown RBP13.72□□□□□ -0.21
SSBP1-201ENST00000265304 NT5DC2Q9H857 520 aa13.72□□□□□ -0.21
SSBP1-201ENST00000265304 PELI2Q9HAT8 420 aa13.72□□□□□ -0.21
SSBP1-201ENST00000265304 ZBTB26Q9HCK0 441 aa13.72□□□□□ -0.21
SSBP1-201ENST00000265304 SLC6A20Q9NP91 592 aa13.72□□□□□ -0.21
SSBP1-201ENST00000265304 MED4Q9NPJ6 270 aa13.72□□□□□ -0.21
SSBP1-201ENST00000265304 OPTCQ9UBM4 332 aa13.72□□□□□ -0.21
SSBP1-201ENST00000265304 TAC3Q9UHF0 121 aa13.72□□□□□ -0.21
SSBP1-201ENST00000265304 SH2B3Q9UQQ2 575 aa13.72□□□□□ -0.21
SSBP1-201ENST00000265304 TSC22D4Q9Y3Q8 395 aa13.72□□□□□ -0.21
SSBP1-201ENST00000265304 SLC9B1P1A6NJY1 282 aa13.71□□□□□ -0.21
SSBP1-201ENST00000265304 B4E171 279 aa13.71□□□□□ -0.21
SSBP1-201ENST00000265304 H3BMH7 237 aa13.71□□□□□ -0.21
SSBP1-201ENST00000265304 TRIM13O60858 407 aa13.71□□□□□ -0.21
SSBP1-201ENST00000265304 SIX3O95343 332 aaPredicted RBP13.71□□□□□ -0.21
SSBP1-201ENST00000265304 BPGMP07738 259 aa13.71□□□□□ -0.21
SSBP1-201ENST00000265304 TSPAN7P41732 249 aa13.71□□□□□ -0.21
SSBP1-201ENST00000265304 ID4P47928 161 aa13.71□□□□□ -0.21
SSBP1-201ENST00000265304 SERPINB4P48594 390 aa13.71□□□□□ -0.21
SSBP1-201ENST00000265304 WDR4P57081 412 aaKnown RBP13.71□□□□□ -0.21
SSBP1-201ENST00000265304 CSNK1G2P78368 415 aa13.71□□□□□ -0.21
SSBP1-201ENST00000265304 GALNT1Q10472 559 aaPredicted RBP13.71□□□□□ -0.21
SSBP1-201ENST00000265304 C16orf72Q14CZ0 275 aa13.71□□□□□ -0.21
SSBP1-201ENST00000265304 PDK4Q16654 411 aa13.71□□□□□ -0.21
SSBP1-201ENST00000265304 LIPMQ5VYY2 423 aa13.71□□□□□ -0.21
SSBP1-201ENST00000265304 ATG9BQ674R7 924 aa13.71□□□□□ -0.21
SSBP1-201ENST00000265304 FBXO42Q6P3S6 717 aa13.71□□□□□ -0.21
SSBP1-201ENST00000265304 NXPE4Q6UWF7 544 aa13.71□□□□□ -0.21
SSBP1-201ENST00000265304 FAM92BQ6ZTR7 304 aa13.71□□□□□ -0.21
SSBP1-201ENST00000265304 RNF44Q7L0R7 432 aa13.71□□□□□ -0.21
SSBP1-201ENST00000265304 BPHLQ86WA6 291 aaPredicted RBP13.71□□□□□ -0.21
SSBP1-201ENST00000265304 L3MBTL4Q8NA19 623 aa13.71□□□□□ -0.21
SSBP1-201ENST00000265304 AGBL5Q8NDL9 886 aa13.71□□□□□ -0.21
SSBP1-201ENST00000265304 SLC5A11Q8WWX8 675 aa13.71□□□□□ -0.21
SSBP1-201ENST00000265304 ESAMQ96AP7 390 aa13.71□□□□□ -0.21
SSBP1-201ENST00000265304 PHF21BQ96EK2 531 aa13.71□□□□□ -0.21
SSBP1-201ENST00000265304 SEC16BQ96JE7 1060 aa13.71□□□□□ -0.21
SSBP1-201ENST00000265304 TMEM237Q96Q45 408 aa13.71□□□□□ -0.21
SSBP1-201ENST00000265304 DPH7Q9BTV6 452 aa13.71□□□□□ -0.21
SSBP1-201ENST00000265304 MRPS30Q9NP92 439 aaKnown RBP13.71□□□□□ -0.21
SSBP1-201ENST00000265304 FBXO8Q9NRD0 319 aa13.71□□□□□ -0.21
SSBP1-201ENST00000265304 AKAP13Q12802 2813 aa13.71□□□□□ -0.22
SSBP1-201ENST00000265304 A0A1W2PNU3 283 aaPredicted RBP13.7□□□□□ -0.22
SSBP1-201ENST00000265304 LRRC14BA6NHZ5 514 aa13.7□□□□□ -0.22
SSBP1-201ENST00000265304 H3BQF6 201 aa13.7□□□□□ -0.22
SSBP1-201ENST00000265304 CSO75390 466 aaKnown RBP13.7□□□□□ -0.22
SSBP1-201ENST00000265304 KATNA1O75449 491 aa13.7□□□□□ -0.22
SSBP1-201ENST00000265304 WDR47O94967 919 aa13.7□□□□□ -0.22
SSBP1-201ENST00000265304 C1GALT1C1LP0DN25 315 aa13.7□□□□□ -0.22
SSBP1-201ENST00000265304 EPB42P16452 691 aa13.7□□□□□ -0.22
SSBP1-201ENST00000265304 MAGP20916 626 aa13.7□□□□□ -0.22
SSBP1-201ENST00000265304 CDH3P22223 829 aa13.7□□□□□ -0.22
SSBP1-201ENST00000265304 EEF1DP29692 281 aaKnown RBP13.7□□□□□ -0.22
SSBP1-201ENST00000265304 ALDH3A1P30838 453 aa13.7□□□□□ -0.22
SSBP1-201ENST00000265304 SERPINB5P36952 375 aa13.7□□□□□ -0.22
SSBP1-201ENST00000265304 MLLT3P42568 568 aaPredicted RBP13.7□□□□□ -0.22
SSBP1-201ENST00000265304 CCR8P51685 355 aa13.7□□□□□ -0.22
SSBP1-201ENST00000265304 MC2RQ01718 297 aa13.7□□□□□ -0.22
SSBP1-201ENST00000265304 CAMK2BQ13554 666 aa13.7□□□□□ -0.22
SSBP1-201ENST00000265304 GTF2H2Q13888 395 aa13.7□□□□□ -0.22
SSBP1-201ENST00000265304 GGTA1PQ4G0N0 100 aa13.7□□□□□ -0.22
SSBP1-201ENST00000265304 GTF2H2CQ6P1K8 395 aa13.7□□□□□ -0.22
SSBP1-201ENST00000265304 TRIM73Q86UV7 250 aa13.7□□□□□ -0.22
SSBP1-201ENST00000265304 C10orf107Q8IVU9 208 aa13.7□□□□□ -0.22
SSBP1-201ENST00000265304 C19orf47Q8N9M1 422 aaKnown RBP13.7□□□□□ -0.22
SSBP1-201ENST00000265304 EXT2Q93063 718 aa13.7□□□□□ -0.22
SSBP1-201ENST00000265304 THAP11Q96EK4 314 aa13.7□□□□□ -0.22
SSBP1-201ENST00000265304 MED8Q96G25 268 aa13.7□□□□□ -0.22
SSBP1-201ENST00000265304 FCRL4Q96PJ5 515 aa13.7□□□□□ -0.22
SSBP1-201ENST00000265304 TRMOQ9BU70 441 aa13.7□□□□□ -0.22
SSBP1-201ENST00000265304 ACAT2Q9BWD1 397 aa13.7□□□□□ -0.22
SSBP1-201ENST00000265304 STRADBQ9C0K7 418 aa13.7□□□□□ -0.22
SSBP1-201ENST00000265304 GSTO2Q9H4Y5 243 aa13.7□□□□□ -0.22
SSBP1-201ENST00000265304 FAM60AQ9NP50 221 aa13.7□□□□□ -0.22
SSBP1-201ENST00000265304 CUEDC1Q9NWM3 386 aaPredicted RBP13.7□□□□□ -0.22
SSBP1-201ENST00000265304 PCDHGA8Q9Y5G5 932 aa13.7□□□□□ -0.22
SSBP1-201ENST00000265304 APC2O95996 2303 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms