RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 HP1BP3Q5SSJ5 553 aaPredicted RBP15.36■□□□□ 0.05
USE1-201ENST00000263897 TEDDM1Q5T9Z0 273 aa15.36■□□□□ 0.05
USE1-201ENST00000263897 ZNF425Q6IV72 752 aa15.36■□□□□ 0.05
USE1-201ENST00000263897 LRRC8EQ6NSJ5 796 aa15.36■□□□□ 0.05
USE1-201ENST00000263897 COX15Q7KZN9 410 aa15.36■□□□□ 0.05
USE1-201ENST00000263897 PPP1R32Q7Z5V6 425 aa15.36■□□□□ 0.05
USE1-201ENST00000263897 GALNT7Q86SF2 657 aa15.36■□□□□ 0.05
USE1-201ENST00000263897 PAQR7Q86WK9 346 aa15.36■□□□□ 0.05
USE1-201ENST00000263897 MCOLN3Q8TDD5 553 aa15.36■□□□□ 0.05
USE1-201ENST00000263897 LRRC39Q96DD0 335 aa15.36■□□□□ 0.05
USE1-201ENST00000263897 TRIM51Q9BSJ1 452 aa15.36■□□□□ 0.05
USE1-201ENST00000263897 NUDT9Q9BW91 350 aa15.36■□□□□ 0.05
USE1-201ENST00000263897 ASH1LQ9NR48 2969 aaKnown RBP15.36■□□□□ 0.05
USE1-201ENST00000263897 P4HTMQ9NXG6 502 aa15.36■□□□□ 0.05
USE1-201ENST00000263897 UTP6Q9NYH9 597 aaKnown RBP15.36■□□□□ 0.05
USE1-201ENST00000263897 G3BP2Q9UN86 482 aaKnown RBP15.36■□□□□ 0.05
USE1-201ENST00000263897 ZNF451Q9Y4E5 1061 aa15.36■□□□□ 0.05
USE1-201ENST00000263897 TEX264Q9Y6I9 313 aa15.36■□□□□ 0.05
USE1-201ENST00000263897 FANCGO15287 622 aa15.35■□□□□ 0.05
USE1-201ENST00000263897 TP73O15350 636 aa15.35■□□□□ 0.05
USE1-201ENST00000263897 CCNDBP1O95273 360 aa15.35■□□□□ 0.05
USE1-201ENST00000263897 MED26O95402 600 aa15.35■□□□□ 0.05
USE1-201ENST00000263897 MMP11P24347 488 aa15.35■□□□□ 0.05
USE1-201ENST00000263897 IMPA1P29218 277 aa15.35■□□□□ 0.05
USE1-201ENST00000263897 RGS4P49798 205 aa15.35■□□□□ 0.05
USE1-201ENST00000263897 ITGA8P53708 1063 aa15.35■□□□□ 0.05
USE1-201ENST00000263897 EMP3P54852 163 aa15.35■□□□□ 0.05
USE1-201ENST00000263897 CDKN2DP55273 166 aa15.35■□□□□ 0.05
USE1-201ENST00000263897 PRTGQ2VWP7 1150 aa15.35■□□□□ 0.05
USE1-201ENST00000263897 RBM20Q5T481 1227 aaKnown RBP15.35■□□□□ 0.05
USE1-201ENST00000263897 PAQR3Q6TCH7 311 aa15.35■□□□□ 0.05
USE1-201ENST00000263897 DTWD1Q8N5C7 304 aa15.35■□□□□ 0.05
USE1-201ENST00000263897 SNF8Q96H20 258 aa15.35■□□□□ 0.05
USE1-201ENST00000263897 OR2A5Q96R48 311 aa15.35■□□□□ 0.05
USE1-201ENST00000263897 SMAD5Q99717 465 aaKnown RBP15.35■□□□□ 0.05
USE1-201ENST00000263897 ZNF304Q9HCX3 659 aa15.35■□□□□ 0.05
USE1-201ENST00000263897 PPANQ9NQ55 473 aaKnown RBP15.35■□□□□ 0.05
USE1-201ENST00000263897 GPR83Q9NYM4 423 aa15.35■□□□□ 0.05
USE1-201ENST00000263897 ADAMTS6Q9UKP5 1117 aa15.35■□□□□ 0.05
USE1-201ENST00000263897 CNTRLQ7Z7A1 2325 aa15.34■□□□□ 0.05
USE1-201ENST00000263897 VSTM2BA6NLU5 285 aa15.34■□□□□ 0.05
USE1-201ENST00000263897 AGPSO00116 658 aa15.34■□□□□ 0.05
USE1-201ENST00000263897 SEC31AO94979 1220 aaKnown RBP15.34■□□□□ 0.05
USE1-201ENST00000263897 C8GP07360 202 aa15.34■□□□□ 0.05
USE1-201ENST00000263897 MLLT10P55197 1068 aa15.34■□□□□ 0.05
USE1-201ENST00000263897 ARL4CP56559 192 aa15.34■□□□□ 0.05
USE1-201ENST00000263897 SOX8P57073 446 aa15.34■□□□□ 0.05
USE1-201ENST00000263897 HIF1AQ16665 826 aa15.34■□□□□ 0.05
USE1-201ENST00000263897 MUM1Q2TAK8 710 aa15.34■□□□□ 0.05
USE1-201ENST00000263897 NADK2Q4G0N4 442 aa15.34■□□□□ 0.05
USE1-201ENST00000263897 THEMIS2Q5TEJ8 643 aa15.34■□□□□ 0.05
USE1-201ENST00000263897 STEAP4Q687X5 459 aa15.34■□□□□ 0.05
USE1-201ENST00000263897 PRMT9Q6P2P2 845 aa15.34■□□□□ 0.05
USE1-201ENST00000263897 TRMT10BQ6PF06 316 aaKnown RBP15.34■□□□□ 0.05
USE1-201ENST00000263897 HPS6Q86YV9 775 aa15.34■□□□□ 0.05
USE1-201ENST00000263897 PALM2Q8IXS6 379 aa15.34■□□□□ 0.05
USE1-201ENST00000263897 METTL27Q8N6F8 245 aaPredicted RBP15.34■□□□□ 0.05
USE1-201ENST00000263897 CLEC1AQ8NC01 280 aa15.34■□□□□ 0.05
USE1-201ENST00000263897 COL26A1Q96A83 441 aa15.34■□□□□ 0.05
USE1-201ENST00000263897 CFAP36Q96G28 342 aa15.34■□□□□ 0.05
USE1-201ENST00000263897 CCDC138Q96M89 665 aa15.34■□□□□ 0.05
USE1-201ENST00000263897 SPSB2Q99619 263 aa15.34■□□□□ 0.05
USE1-201ENST00000263897 WDR83Q9BRX9 315 aaKnown RBP15.34■□□□□ 0.05
USE1-201ENST00000263897 TRIM31Q9BZY9 425 aa15.34■□□□□ 0.05
USE1-201ENST00000263897 SYNPO2LQ9H987 977 aa15.34■□□□□ 0.05
USE1-201ENST00000263897 PARVBQ9HBI1 364 aa15.34■□□□□ 0.05
USE1-201ENST00000263897 ATP13A2Q9NQ11 1180 aa15.34■□□□□ 0.05
USE1-201ENST00000263897 ABCF3Q9NUQ8 709 aa15.34■□□□□ 0.05
USE1-201ENST00000263897 STOX2Q9P2F5 926 aaPredicted RBP15.34■□□□□ 0.05
USE1-201ENST00000263897 NXT1Q9UKK6 140 aaKnown RBP15.34■□□□□ 0.05
USE1-201ENST00000263897 CHMP2BQ9UQN3 213 aa15.34■□□□□ 0.05
USE1-201ENST00000263897 PDE10AQ9Y233 779 aa15.34■□□□□ 0.05
USE1-201ENST00000263897 MAU2Q9Y6X3 613 aa15.34■□□□□ 0.05
USE1-201ENST00000263897 DOCK10Q96BY6 2186 aa15.34■□□□□ 0.05
USE1-201ENST00000263897 EFCAB8A8MWE9 144 aa15.33■□□□□ 0.04
USE1-201ENST00000263897 SLC16A5O15375 505 aa15.33■□□□□ 0.04
USE1-201ENST00000263897 DPM1O60762 260 aa15.33■□□□□ 0.04
USE1-201ENST00000263897 EZRP15311 586 aaKnown RBP15.33■□□□□ 0.04
USE1-201ENST00000263897 HRH2P25021 359 aa15.33■□□□□ 0.04
USE1-201ENST00000263897 FRG1Q14331 258 aaKnown RBP15.33■□□□□ 0.04
USE1-201ENST00000263897 MYO1HQ8N1T3 1032 aa15.33■□□□□ 0.04
USE1-201ENST00000263897 GALNT16Q8N428 558 aa15.33■□□□□ 0.04
USE1-201ENST00000263897 C10orf90Q96M02 699 aa15.33■□□□□ 0.04
USE1-201ENST00000263897 KRT12Q99456 494 aa15.33■□□□□ 0.04
USE1-201ENST00000263897 TMEM184CQ9NVA4 438 aa15.33■□□□□ 0.04
USE1-201ENST00000263897 CUEDC1Q9NWM3 386 aaPredicted RBP15.33■□□□□ 0.04
USE1-201ENST00000263897 C5AR2Q9P296 337 aa15.33■□□□□ 0.04
USE1-201ENST00000263897 SLC17A6Q9P2U8 582 aa15.33■□□□□ 0.04
USE1-201ENST00000263897 CTSFQ9UBX1 484 aa15.33■□□□□ 0.04
USE1-201ENST00000263897 CDC14AQ9UNH5 594 aa15.33■□□□□ 0.04
USE1-201ENST00000263897 PLAAQ9Y263 795 aa15.33■□□□□ 0.04
USE1-201ENST00000263897 VWA7Q9Y334 891 aa15.33■□□□□ 0.04
USE1-201ENST00000263897 TTLL8A6PVC2 850 aa15.32■□□□□ 0.04
USE1-201ENST00000263897 H7BY64 318 aa15.32■□□□□ 0.04
USE1-201ENST00000263897 MASP2O00187 686 aa15.32■□□□□ 0.04
USE1-201ENST00000263897 TXNDC9O14530 226 aa15.32■□□□□ 0.04
USE1-201ENST00000263897 IL2P60568 153 aa15.32■□□□□ 0.04
USE1-201ENST00000263897 OCA2Q04671 838 aa15.32■□□□□ 0.04
USE1-201ENST00000263897 PDIA2Q13087 525 aaKnown RBP15.32■□□□□ 0.04
USE1-201ENST00000263897 CBLBQ13191 982 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms