RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 SHCBP1LQ9BZQ2 653 aa15.22■□□□□ 0.03
CCDC90B-201ENST00000260054 SYNDIG1Q9H7V2 258 aa15.22■□□□□ 0.03
CCDC90B-201ENST00000260054 TOR4AQ9NXH8 423 aa15.22■□□□□ 0.03
CCDC90B-201ENST00000260054 ZNF225Q9UK10 706 aa15.22■□□□□ 0.03
CCDC90B-201ENST00000260054 MN1Q10571 1320 aaPredicted RBP15.21■□□□□ 0.03
CCDC90B-201ENST00000260054 PCNX2A6NKB5 2137 aa15.21■□□□□ 0.03
CCDC90B-201ENST00000260054 NTN3O00634 580 aaPredicted RBP15.21■□□□□ 0.03
CCDC90B-201ENST00000260054 TM4SF5O14894 197 aa15.21■□□□□ 0.03
CCDC90B-201ENST00000260054 KLF11O14901 512 aa15.21■□□□□ 0.03
CCDC90B-201ENST00000260054 POLR3GO15318 223 aaPredicted RBP15.21■□□□□ 0.03
CCDC90B-201ENST00000260054 NRP2O60462 931 aa15.21■□□□□ 0.03
CCDC90B-201ENST00000260054 MLYCDO95822 493 aa15.21■□□□□ 0.03
CCDC90B-201ENST00000260054 C9P02748 559 aa15.21■□□□□ 0.03
CCDC90B-201ENST00000260054 PVRP15151 417 aa15.21■□□□□ 0.03
CCDC90B-201ENST00000260054 MAGP20916 626 aa15.21■□□□□ 0.03
CCDC90B-201ENST00000260054 MPSTP25325 297 aa15.21■□□□□ 0.03
CCDC90B-201ENST00000260054 VARSP26640 1264 aaKnown RBP15.21■□□□□ 0.03
CCDC90B-201ENST00000260054 GRIA3P42263 894 aa15.21■□□□□ 0.03
CCDC90B-201ENST00000260054 ABCE1P61221 599 aaKnown RBP15.21■□□□□ 0.03
CCDC90B-201ENST00000260054 NAA20P61599 178 aa15.21■□□□□ 0.03
CCDC90B-201ENST00000260054 SH3BP2P78314 561 aa15.21■□□□□ 0.03
CCDC90B-201ENST00000260054 TRIP6Q15654 476 aaKnown RBP15.21■□□□□ 0.03
CCDC90B-201ENST00000260054 RBBP7Q16576 425 aa15.21■□□□□ 0.03
CCDC90B-201ENST00000260054 ZNF574Q6ZN55 896 aaPredicted RBP15.21■□□□□ 0.03
CCDC90B-201ENST00000260054 PLXDC1Q8IUK5 500 aa15.21■□□□□ 0.03
CCDC90B-201ENST00000260054 ATP6V1E2Q96A05 226 aa15.21■□□□□ 0.03
CCDC90B-201ENST00000260054 MAGEB18Q96M61 343 aa15.21■□□□□ 0.03
CCDC90B-201ENST00000260054 TRMOQ9BU70 441 aa15.21■□□□□ 0.03
CCDC90B-201ENST00000260054 KLHL25Q9H0H3 589 aa15.21■□□□□ 0.03
CCDC90B-201ENST00000260054 TNFRSF12AQ9NP84 129 aa15.21■□□□□ 0.03
CCDC90B-201ENST00000260054 KLHL3Q9UH77 587 aa15.21■□□□□ 0.03
CCDC90B-201ENST00000260054 A0A0J9YY10 115 aa15.2■□□□□ 0.02
CCDC90B-201ENST00000260054 TMEM114B3SHH9 223 aa15.2■□□□□ 0.02
CCDC90B-201ENST00000260054 H7BY64 318 aa15.2■□□□□ 0.02
CCDC90B-201ENST00000260054 CLGNO14967 610 aa15.2■□□□□ 0.02
CCDC90B-201ENST00000260054 SNNO75324 88 aaPredicted RBP15.2■□□□□ 0.02
CCDC90B-201ENST00000260054 WFS1O76024 890 aa15.2■□□□□ 0.02
CCDC90B-201ENST00000260054 CCNDBP1O95273 360 aa15.2■□□□□ 0.02
CCDC90B-201ENST00000260054 CPNE6O95741 557 aa15.2■□□□□ 0.02
CCDC90B-201ENST00000260054 CD22P20273 847 aa15.2■□□□□ 0.02
CCDC90B-201ENST00000260054 SERPINB5P36952 375 aa15.2■□□□□ 0.02
CCDC90B-201ENST00000260054 SLC1A6P48664 564 aa15.2■□□□□ 0.02
CCDC90B-201ENST00000260054 CCNG1P51959 295 aa15.2■□□□□ 0.02
CCDC90B-201ENST00000260054 PCDH1Q08174 1060 aa15.2■□□□□ 0.02
CCDC90B-201ENST00000260054 CHIT1Q13231 466 aa15.2■□□□□ 0.02
CCDC90B-201ENST00000260054 DOC2AQ14183 400 aa15.2■□□□□ 0.02
CCDC90B-201ENST00000260054 XKR6Q5GH73 641 aa15.2■□□□□ 0.02
CCDC90B-201ENST00000260054 ATG16L1Q676U5 607 aa15.2■□□□□ 0.02
CCDC90B-201ENST00000260054 LETMD1Q6P1Q0 360 aa15.2■□□□□ 0.02
CCDC90B-201ENST00000260054 NXPE4Q6UWF7 544 aa15.2■□□□□ 0.02
CCDC90B-201ENST00000260054 GLRX5Q86SX6 157 aa15.2■□□□□ 0.02
CCDC90B-201ENST00000260054 SYVN1Q86TM6 617 aa15.2■□□□□ 0.02
CCDC90B-201ENST00000260054 ABHD11Q8NFV4 315 aa15.2■□□□□ 0.02
CCDC90B-201ENST00000260054 LRRC8CQ8TDW0 803 aa15.2■□□□□ 0.02
CCDC90B-201ENST00000260054 AGAP11Q8TF27 550 aa15.2■□□□□ 0.02
CCDC90B-201ENST00000260054 ZDHHC12Q96GR4 267 aa15.2■□□□□ 0.02
CCDC90B-201ENST00000260054 PRR11Q96HE9 360 aaPredicted RBP15.2■□□□□ 0.02
CCDC90B-201ENST00000260054 PRAP1Q96NZ9 151 aa15.2■□□□□ 0.02
CCDC90B-201ENST00000260054 ZNF382Q96SR6 550 aa15.2■□□□□ 0.02
CCDC90B-201ENST00000260054 SORT1Q99523 831 aa15.2■□□□□ 0.02
CCDC90B-201ENST00000260054 DPH7Q9BTV6 452 aa15.2■□□□□ 0.02
CCDC90B-201ENST00000260054 NTMT1Q9BV86 223 aa15.2■□□□□ 0.02
CCDC90B-201ENST00000260054 CAPS2Q9BXY5 557 aa15.2■□□□□ 0.02
CCDC90B-201ENST00000260054 SPNS1Q9H2V7 528 aa15.2■□□□□ 0.02
CCDC90B-201ENST00000260054 TLCD2A6NGC4 264 aa15.19■□□□□ 0.02
CCDC90B-201ENST00000260054 PRAMEF10O60809 474 aa15.19■□□□□ 0.02
CCDC90B-201ENST00000260054 RFPL3O75679 317 aa15.19■□□□□ 0.02
CCDC90B-201ENST00000260054 FKBP9O95302 570 aa15.19■□□□□ 0.02
CCDC90B-201ENST00000260054 OTCP00480 354 aa15.19■□□□□ 0.02
CCDC90B-201ENST00000260054 ST6GAL1P15907 406 aa15.19■□□□□ 0.02
CCDC90B-201ENST00000260054 CDH3P22223 829 aa15.19■□□□□ 0.02
CCDC90B-201ENST00000260054 ARL1P40616 181 aaPredicted RBP15.19■□□□□ 0.02
CCDC90B-201ENST00000260054 ERVPABLB-1P60509 514 aa15.19■□□□□ 0.02
CCDC90B-201ENST00000260054 CSNK1G2P78368 415 aa15.19■□□□□ 0.02
CCDC90B-201ENST00000260054 IRF8Q02556 426 aa15.19■□□□□ 0.02
CCDC90B-201ENST00000260054 GALNT1Q10472 559 aaPredicted RBP15.19■□□□□ 0.02
CCDC90B-201ENST00000260054 E2F2Q14209 437 aa15.19■□□□□ 0.02
CCDC90B-201ENST00000260054 ZIC1Q15915 447 aa15.19■□□□□ 0.02
CCDC90B-201ENST00000260054 CCDC157Q569K6 752 aa15.19■□□□□ 0.02
CCDC90B-201ENST00000260054 ATG9BQ674R7 924 aa15.19■□□□□ 0.02
CCDC90B-201ENST00000260054 ZNF425Q6IV72 752 aa15.19■□□□□ 0.02
CCDC90B-201ENST00000260054 TMEM71Q6P5X7 295 aa15.19■□□□□ 0.02
CCDC90B-201ENST00000260054 CUZD1Q86UP6 607 aa15.19■□□□□ 0.02
CCDC90B-201ENST00000260054 OR4F6Q8NGB9 312 aa15.19■□□□□ 0.02
CCDC90B-201ENST00000260054 WDR34Q96EX3 536 aa15.19■□□□□ 0.02
CCDC90B-201ENST00000260054 GFM1Q96RP9 751 aaKnown RBP15.19■□□□□ 0.02
CCDC90B-201ENST00000260054 CD180Q99467 661 aa15.19■□□□□ 0.02
CCDC90B-201ENST00000260054 ACTR8Q9H981 624 aa15.19■□□□□ 0.02
CCDC90B-201ENST00000260054 MID1IP1Q9NPA3 183 aa15.19■□□□□ 0.02
CCDC90B-201ENST00000260054 C1GALT1Q9NS00 363 aa15.19■□□□□ 0.02
CCDC90B-201ENST00000260054 RNF11Q9Y3C5 154 aa15.19■□□□□ 0.02
CCDC90B-201ENST00000260054 CFAP54Q96N23 3096 aa15.19■□□□□ 0.02
CCDC90B-201ENST00000260054 IGHV5-51A0A0C4DH38 117 aa15.19■□□□□ 0.02
CCDC90B-201ENST00000260054 D6RAR5 112 aa15.19■□□□□ 0.02
CCDC90B-201ENST00000260054 OR4F21O95013 312 aa15.19■□□□□ 0.02
CCDC90B-201ENST00000260054 ESRRBO95718 433 aa15.19■□□□□ 0.02
CCDC90B-201ENST00000260054 HSPA4LO95757 839 aa15.19■□□□□ 0.02
CCDC90B-201ENST00000260054 EBLN1P0CF75 366 aa15.19■□□□□ 0.02
CCDC90B-201ENST00000260054 C1GALT1C1LP0DN25 315 aa15.19■□□□□ 0.02
CCDC90B-201ENST00000260054 CSRP1P21291 193 aaKnown RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms