RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 TRIM55Q9BYV6 548 aa21.96■■□□□ 1.11
LSM4-201ENST00000252816 CUEDC1Q9NWM3 386 aaPredicted RBP21.96■■□□□ 1.11
LSM4-201ENST00000252816 IFT80Q9P2H3 777 aaPredicted RBP21.96■■□□□ 1.11
LSM4-201ENST00000252816 ANKMY1Q9P2S6 941 aa21.96■■□□□ 1.11
LSM4-201ENST00000252816 IKZF3Q9UKT9 509 aa21.96■■□□□ 1.11
LSM4-201ENST00000252816 FAM95CA0A1B0GW59 222 aa21.95■■□□□ 1.1
LSM4-201ENST00000252816 A0A1B0GX78 115 aa21.95■■□□□ 1.1
LSM4-201ENST00000252816 H0YGG7 62 aa21.95■■□□□ 1.1
LSM4-201ENST00000252816 CCNDBP1O95273 360 aa21.95■■□□□ 1.1
LSM4-201ENST00000252816 SAT1P21673 171 aa21.95■■□□□ 1.1
LSM4-201ENST00000252816 ARF3P61204 181 aaPredicted RBP21.95■■□□□ 1.1
LSM4-201ENST00000252816 ZNF460Q14592 562 aa21.95■■□□□ 1.1
LSM4-201ENST00000252816 THEMIS2Q5TEJ8 643 aa21.95■■□□□ 1.1
LSM4-201ENST00000252816 YOD1Q5VVQ6 348 aaPredicted RBP21.95■■□□□ 1.1
LSM4-201ENST00000252816 CPZQ66K79 652 aa21.95■■□□□ 1.1
LSM4-201ENST00000252816 MRPL14Q6P1L8 145 aaKnown RBP21.95■■□□□ 1.1
LSM4-201ENST00000252816 ZNF605Q86T29 641 aa21.95■■□□□ 1.1
LSM4-201ENST00000252816 APLFQ8IW19 511 aaPredicted RBP21.95■■□□□ 1.1
LSM4-201ENST00000252816 TTC29Q8NA56 475 aaPredicted RBP21.95■■□□□ 1.1
LSM4-201ENST00000252816 ZDHHC19Q8WVZ1 309 aaPredicted RBP21.95■■□□□ 1.1
LSM4-201ENST00000252816 NDOR1Q9UHB4 597 aa21.95■■□□□ 1.1
LSM4-201ENST00000252816 GPN3Q9UHW5 284 aaPredicted RBP21.95■■□□□ 1.1
LSM4-201ENST00000252816 HEATR5BQ9P2D3 2071 aa21.95■■□□□ 1.1
LSM4-201ENST00000252816 GCN1Q92616 2671 aaKnown RBP21.94■■□□□ 1.1
LSM4-201ENST00000252816 TCRBV9S1A1TA0A576 114 aa21.94■■□□□ 1.1
LSM4-201ENST00000252816 DSCR3O14972 297 aa21.94■■□□□ 1.1
LSM4-201ENST00000252816 DNAJB5O75953 348 aa21.94■■□□□ 1.1
LSM4-201ENST00000252816 ONECUT2O95948 504 aa21.94■■□□□ 1.1
LSM4-201ENST00000252816 C1QAP02745 245 aa21.94■■□□□ 1.1
LSM4-201ENST00000252816 EIF2S1P05198 315 aaKnown RBP21.94■■□□□ 1.1
LSM4-201ENST00000252816 TAS2R39P59534 338 aa21.94■■□□□ 1.1
LSM4-201ENST00000252816 GPX6P59796 221 aa21.94■■□□□ 1.1
LSM4-201ENST00000252816 TBPL1P62380 186 aa21.94■■□□□ 1.1
LSM4-201ENST00000252816 ABATP80404 500 aa21.94■■□□□ 1.1
LSM4-201ENST00000252816 CAV1Q03135 178 aa21.94■■□□□ 1.1
LSM4-201ENST00000252816 CHAF1BQ13112 559 aa21.94■■□□□ 1.1
LSM4-201ENST00000252816 WHAMMP3Q1A5X7 153 aa21.94■■□□□ 1.1
LSM4-201ENST00000252816 ZXDCQ2QGD7 858 aaPredicted RBP21.94■■□□□ 1.1
LSM4-201ENST00000252816 AGTRAPQ6RW13 159 aa21.94■■□□□ 1.1
LSM4-201ENST00000252816 C9orf43Q8TAL5 461 aaPredicted RBP21.94■■□□□ 1.1
LSM4-201ENST00000252816 ZNF592Q92610 1267 aa21.94■■□□□ 1.1
LSM4-201ENST00000252816 PDLIM5Q96HC4 596 aaKnown RBP21.94■■□□□ 1.1
LSM4-201ENST00000252816 VPS39Q96JC1 886 aa21.94■■□□□ 1.1
LSM4-201ENST00000252816 LRRC1Q9BTT6 524 aa21.94■■□□□ 1.1
LSM4-201ENST00000252816 ATG10Q9H0Y0 220 aa21.94■■□□□ 1.1
LSM4-201ENST00000252816 RHOJQ9H4E5 214 aa21.94■■□□□ 1.1
LSM4-201ENST00000252816 CCDC177Q9NQR7 707 aaPredicted RBP21.94■■□□□ 1.1
LSM4-201ENST00000252816 ZNF71Q9NQZ8 489 aaPredicted RBP21.94■■□□□ 1.1
LSM4-201ENST00000252816 NSMCE4AQ9NXX6 385 aa21.94■■□□□ 1.1
LSM4-201ENST00000252816 SH2B3Q9UQQ2 575 aa21.94■■□□□ 1.1
LSM4-201ENST00000252816 PADI2Q9Y2J8 665 aa21.94■■□□□ 1.1
LSM4-201ENST00000252816 HELZ2Q9BYK8 2649 aaKnown RBP21.93■■□□□ 1.1
LSM4-201ENST00000252816 ESYT3A0FGR9 886 aa21.93■■□□□ 1.1
LSM4-201ENST00000252816 HYKKA2RU49 373 aa21.93■■□□□ 1.1
LSM4-201ENST00000252816 RFPL1O75677 317 aa21.93■■□□□ 1.1
LSM4-201ENST00000252816 PLA2G2AP14555 144 aa21.93■■□□□ 1.1
LSM4-201ENST00000252816 ZNF37AP17032 561 aaPredicted RBP21.93■■□□□ 1.1
LSM4-201ENST00000252816 PRTGQ2VWP7 1150 aa21.93■■□□□ 1.1
LSM4-201ENST00000252816 PRAMEF13Q5VWM6 474 aa21.93■■□□□ 1.1
LSM4-201ENST00000252816 C3orf62Q6ZUJ4 267 aa21.93■■□□□ 1.1
LSM4-201ENST00000252816 COX15Q7KZN9 410 aa21.93■■□□□ 1.1
LSM4-201ENST00000252816 CCDC25Q86WR0 208 aa21.93■■□□□ 1.1
LSM4-201ENST00000252816 CEP97Q8IW35 865 aa21.93■■□□□ 1.1
LSM4-201ENST00000252816 METTL27Q8N6F8 245 aaPredicted RBP21.93■■□□□ 1.1
LSM4-201ENST00000252816 PCSK5Q92824 1860 aa21.93■■□□□ 1.1
LSM4-201ENST00000252816 OR2A5Q96R48 311 aa21.93■■□□□ 1.1
LSM4-201ENST00000252816 PHACTR1Q9C0D0 580 aa21.93■■□□□ 1.1
LSM4-201ENST00000252816 TLK1Q9UKI8 766 aa21.93■■□□□ 1.1
LSM4-201ENST00000252816 PTRH2Q9Y3E5 179 aaKnown RBP21.93■■□□□ 1.1
LSM4-201ENST00000252816 CCDC88CQ9P219 2028 aa21.92■■□□□ 1.1
LSM4-201ENST00000252816 BAHCC1Q9P281 2608 aa21.92■■□□□ 1.1
LSM4-201ENST00000252816 ARGFXA6NJG6 315 aa21.92■■□□□ 1.1
LSM4-201ENST00000252816 H7BY64 318 aa21.92■■□□□ 1.1
LSM4-201ENST00000252816 K7EM74 188 aa21.92■■□□□ 1.1
LSM4-201ENST00000252816 HAT1O14929 419 aa21.92■■□□□ 1.1
LSM4-201ENST00000252816 OR1D4P47884 311 aa21.92■■□□□ 1.1
LSM4-201ENST00000252816 NAE1Q13564 534 aa21.92■■□□□ 1.1
LSM4-201ENST00000252816 FAM214AQ32MH5 1076 aa21.92■■□□□ 1.1
LSM4-201ENST00000252816 C8orf74Q6P047 294 aa21.92■■□□□ 1.1
LSM4-201ENST00000252816 SBSNQ6UWP8 590 aa21.92■■□□□ 1.1
LSM4-201ENST00000252816 CYS1Q717R9 158 aa21.92■■□□□ 1.1
LSM4-201ENST00000252816 ADCK2Q7Z695 626 aa21.92■■□□□ 1.1
LSM4-201ENST00000252816 PTRH1Q86Y79 214 aaKnown RBP21.92■■□□□ 1.1
LSM4-201ENST00000252816 PLD3Q8IV08 490 aa21.92■■□□□ 1.1
LSM4-201ENST00000252816 OR2Y1Q8NGV0 311 aa21.92■■□□□ 1.1
LSM4-201ENST00000252816 C10orf90Q96M02 699 aa21.92■■□□□ 1.1
LSM4-201ENST00000252816 PRAP1Q96NZ9 151 aa21.92■■□□□ 1.1
LSM4-201ENST00000252816 SGPP1Q9BX95 441 aa21.92■■□□□ 1.1
LSM4-201ENST00000252816 ANKRD12Q6UB98 2062 aa21.92■■□□□ 1.1
LSM4-201ENST00000252816 MED13Q9UHV7 2174 aa21.91■■□□□ 1.1
LSM4-201ENST00000252816 FAM159BA6NKW6 160 aa21.91■■□□□ 1.1
LSM4-201ENST00000252816 HIST1H2AGP0C0S8 130 aaPredicted RBP21.91■■□□□ 1.1
LSM4-201ENST00000252816 EZRP15311 586 aaKnown RBP21.91■■□□□ 1.1
LSM4-201ENST00000252816 NR1D1P20393 614 aa21.91■■□□□ 1.1
LSM4-201ENST00000252816 HIST1H2ADP20671 130 aa21.91■■□□□ 1.1
LSM4-201ENST00000252816 OTX2P32243 289 aa21.91■■□□□ 1.1
LSM4-201ENST00000252816 MAGEA4P43358 317 aa21.91■■□□□ 1.1
LSM4-201ENST00000252816 RELAQ04206 551 aa21.91■■□□□ 1.1
LSM4-201ENST00000252816 OVCH1Q7RTY7 1134 aa21.91■■□□□ 1.1
LSM4-201ENST00000252816 CSNK1A1LQ8N752 337 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms