RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 RPS5P46782 204 aaKnown RBP4.04□□□□□ -1.76
UBE4A-201ENST00000252108 SGSHP51688 502 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 OR2B6P58173 313 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 RPS14P62263 151 aaKnown RBP4.04□□□□□ -1.76
UBE4A-201ENST00000252108 FBXL22Q6P050 247 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 TRIM40Q6P9F5 258 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 CASP12Q6UXS9 341 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 DLEU7Q6UYE1 221 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 GCNT7Q6ZNI0 430 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 LRRC70Q7Z2Q7 622 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 TMEM173Q86WV6 379 aaPredicted RBP4.04□□□□□ -1.76
UBE4A-201ENST00000252108 OR2T11Q8NH01 316 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 NR4A3Q92570 626 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 ZNF689Q96CS4 500 aaPredicted RBP4.04□□□□□ -1.76
UBE4A-201ENST00000252108 MRPL48Q96GC5 212 aaKnown RBP4.04□□□□□ -1.76
UBE4A-201ENST00000252108 TEX37Q96LM6 180 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 CTRCQ99895 268 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 GABARAPL1Q9H0R8 117 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 SMPD4Q9NXE4 827 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 AHSPQ9NZD4 102 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 GMPR2Q9P2T1 348 aaKnown RBP4.04□□□□□ -1.76
UBE4A-201ENST00000252108 CPA4Q9UI42 421 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 IGLV3-16A0A075B6K0 115 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 RGS5O15539 181 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 MSI1O43347 362 aaKnown RBP4.03□□□□□ -1.76
UBE4A-201ENST00000252108 CLDN11O75508 207 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 SLITRK5O94991 958 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 FTH1P02794 183 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 DBTP11182 482 aaKnown RBP4.03□□□□□ -1.76
UBE4A-201ENST00000252108 PABPC1P11940 636 aaKnown RBP4.03□□□□□ -1.76
UBE4A-201ENST00000252108 ACPPP15309 386 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 MYL12AP19105 171 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 PRPH2P23942 346 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 SDC2P34741 201 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 CNTN1Q12860 1018 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 TBCEQ15813 527 aaPredicted RBP4.03□□□□□ -1.76
UBE4A-201ENST00000252108 TIGD6Q17RP2 521 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 C10orf120Q5SQS8 335 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 SYT6Q5T7P8 510 aaPredicted RBP4.03□□□□□ -1.76
UBE4A-201ENST00000252108 TMPRSS11AQ6ZMR5 421 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 EIF3MQ7L2H7 374 aaKnown RBP4.03□□□□□ -1.76
UBE4A-201ENST00000252108 OOSP2Q86WS3 158 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 TRIM48Q8IWZ4 208 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 GJD3Q8N144 294 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 C1orf52Q8N6N3 182 aaKnown RBP4.03□□□□□ -1.76
UBE4A-201ENST00000252108 ASCC1Q8N9N2 400 aaKnown RBP4.03□□□□□ -1.76
UBE4A-201ENST00000252108 C11orf65Q8NCR3 313 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 CHDHQ8NE62 594 aaPredicted RBP4.03□□□□□ -1.76
UBE4A-201ENST00000252108 DENND6BQ8NEG7 585 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 FBXO22Q8NEZ5 403 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 PJA1Q8NG27 643 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 C2orf15Q8WU43 125 aaKnown RBP4.03□□□□□ -1.76
UBE4A-201ENST00000252108 SELENOMQ8WWX9 145 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 ATOH1Q92858 354 aaPredicted RBP4.03□□□□□ -1.76
UBE4A-201ENST00000252108 LGALS12Q96DT0 336 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 LRRC46Q96FV0 321 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 PPP1R16AQ96I34 528 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 HEPHQ9BQS7 1158 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 OCEL1Q9H607 264 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 GALPQ9UBC7 116 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 SFMBT1Q9UHJ3 866 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 ING4Q9UNL4 249 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 RNF6Q9Y252 685 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 PIKFYVEQ9Y2I7 2098 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 DGKBQ9Y6T7 804 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 KCNE1BA0A087WTH5 132 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 A0A1W2PQH9 124 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 NEMP2A6NFY4 417 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 E2F3O00716 465 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 SYN3O14994 580 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 B3GAT3O94766 335 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 CLDN9O95484 217 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 FADS2O95864 444 aaKnown RBP4.03□□□□□ -1.76
UBE4A-201ENST00000252108 C8GP07360 202 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 MTHFD1P11586 935 aaKnown RBP4.03□□□□□ -1.76
UBE4A-201ENST00000252108 JUNDP17535 347 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 HRH2P25021 359 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 ALDH7A1P49419 539 aaKnown RBP4.03□□□□□ -1.76
UBE4A-201ENST00000252108 HNMTP50135 292 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 RORCP51449 518 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 CASP6P55212 293 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 C21orf58P58505 322 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 DAB2P98082 770 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 RBBP4Q09028 425 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 DGCR6Q14129 220 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 CLCA4Q14CN2 919 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 UAP1L1Q3KQV9 507 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 GPR33Q49SQ1 333 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 ZNF551Q7Z340 670 aaPredicted RBP4.03□□□□□ -1.76
UBE4A-201ENST00000252108 KIAA0907Q7Z7F0 614 aaPredicted RBP4.03□□□□□ -1.76
UBE4A-201ENST00000252108 SYT12Q8IV01 421 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 ASIC4Q96FT7 647 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 HMCESQ96FZ2 354 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 TBATAQ96M53 351 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 LYSMD1Q96S90 227 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 MUC3BQ9H195 1237 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 CHST8Q9H2A9 424 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 THG1LQ9NWX6 298 aaKnown RBP4.03□□□□□ -1.76
UBE4A-201ENST00000252108 PDP1Q9P0J1 537 aaPredicted RBP4.03□□□□□ -1.76
UBE4A-201ENST00000252108 RABL2AQ9UBK7 228 aaPredicted RBP4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms