RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 STOX2Q9P2F5 926 aaPredicted RBP18.92■□□□□ 0.62
CDC42EP1-201ENST00000249014 TMEFF2Q9UIK5 374 aaPredicted RBP18.92■□□□□ 0.62
CDC42EP1-201ENST00000249014 CLIC1O00299 241 aa18.92■□□□□ 0.62
CDC42EP1-201ENST00000249014 SYN1P17600 705 aa18.92■□□□□ 0.62
CDC42EP1-201ENST00000249014 ENGP17813 658 aa18.92■□□□□ 0.62
CDC42EP1-201ENST00000249014 BDKRB1P46663 353 aa18.92■□□□□ 0.62
CDC42EP1-201ENST00000249014 HNRNPFP52597 415 aaKnown RBP18.92■□□□□ 0.62
CDC42EP1-201ENST00000249014 NTHL1P78549 312 aa18.92■□□□□ 0.62
CDC42EP1-201ENST00000249014 EPS8Q12929 822 aa18.92■□□□□ 0.62
CDC42EP1-201ENST00000249014 NAE1Q13564 534 aa18.92■□□□□ 0.62
CDC42EP1-201ENST00000249014 XAF1Q6GPH4 301 aa18.92■□□□□ 0.62
CDC42EP1-201ENST00000249014 LAIR2Q6ISS4 152 aa18.92■□□□□ 0.62
CDC42EP1-201ENST00000249014 ANKRD26P1Q6NSI1 321 aa18.92■□□□□ 0.62
CDC42EP1-201ENST00000249014 AGTRAPQ6RW13 159 aa18.92■□□□□ 0.62
CDC42EP1-201ENST00000249014 TECPR1Q7Z6L1 1165 aa18.92■□□□□ 0.62
CDC42EP1-201ENST00000249014 GALNT10Q86SR1 603 aa18.92■□□□□ 0.62
CDC42EP1-201ENST00000249014 CLECL1Q8IZS7 167 aa18.92■□□□□ 0.62
CDC42EP1-201ENST00000249014 ZNF555Q8NEP9 628 aa18.92■□□□□ 0.62
CDC42EP1-201ENST00000249014 MAGEB10Q96LZ2 347 aaPredicted RBP18.92■□□□□ 0.62
CDC42EP1-201ENST00000249014 FANCEQ9HB96 536 aa18.92■□□□□ 0.62
CDC42EP1-201ENST00000249014 IL36AQ9UHA7 158 aa18.92■□□□□ 0.62
CDC42EP1-201ENST00000249014 CDH7Q9ULB5 785 aa18.92■□□□□ 0.62
CDC42EP1-201ENST00000249014 BTBD3Q9Y2F9 522 aa18.92■□□□□ 0.62
CDC42EP1-201ENST00000249014 ANKRD33BA6NCL7 494 aa18.91■□□□□ 0.62
CDC42EP1-201ENST00000249014 CCNDBP1O95273 360 aa18.91■□□□□ 0.62
CDC42EP1-201ENST00000249014 ETHE1O95571 254 aa18.91■□□□□ 0.62
CDC42EP1-201ENST00000249014 ZNF682O95780 498 aa18.91■□□□□ 0.62
CDC42EP1-201ENST00000249014 MATN1P21941 496 aa18.91■□□□□ 0.62
CDC42EP1-201ENST00000249014 MAGEA2P43356 314 aa18.91■□□□□ 0.62
CDC42EP1-201ENST00000249014 TRPC1P48995 793 aa18.91■□□□□ 0.62
CDC42EP1-201ENST00000249014 NUP107P57740 925 aa18.91■□□□□ 0.62
CDC42EP1-201ENST00000249014 DCTN2Q13561 401 aaKnown RBP18.91■□□□□ 0.62
CDC42EP1-201ENST00000249014 SYTL3Q4VX76 610 aa18.91■□□□□ 0.62
CDC42EP1-201ENST00000249014 LRRC23Q53EV4 343 aaPredicted RBP18.91■□□□□ 0.62
CDC42EP1-201ENST00000249014 RBM48Q5RL73 367 aaKnown RBP18.91■□□□□ 0.62
CDC42EP1-201ENST00000249014 ZCCHC8Q6NZY4 707 aaKnown RBP18.91■□□□□ 0.62
CDC42EP1-201ENST00000249014 ZDHHC21Q8IVQ6 265 aa18.91■□□□□ 0.62
CDC42EP1-201ENST00000249014 OR13F1Q8NGS4 319 aa18.91■□□□□ 0.62
CDC42EP1-201ENST00000249014 HDAC2Q92769 488 aaKnown RBP18.91■□□□□ 0.62
CDC42EP1-201ENST00000249014 C11orf24Q96F05 449 aaPredicted RBP18.91■□□□□ 0.62
CDC42EP1-201ENST00000249014 TUBA1CQ9BQE3 449 aa18.91■□□□□ 0.62
CDC42EP1-201ENST00000249014 FAM83CQ9BQN1 747 aa18.91■□□□□ 0.62
CDC42EP1-201ENST00000249014 SAGE1Q9NXZ1 904 aa18.91■□□□□ 0.62
CDC42EP1-201ENST00000249014 NFKBIL1Q9UBC1 381 aaPredicted RBP18.91■□□□□ 0.62
CDC42EP1-201ENST00000249014 ABCG2Q9UNQ0 655 aa18.91■□□□□ 0.62
CDC42EP1-201ENST00000249014 ITM2BQ9Y287 266 aa18.91■□□□□ 0.62
CDC42EP1-201ENST00000249014 MYO7AQ13402 2215 aa18.91■□□□□ 0.62
CDC42EP1-201ENST00000249014 EVPLLA8MZ36 301 aa18.91■□□□□ 0.62
CDC42EP1-201ENST00000249014 KCNK5O95279 499 aa18.91■□□□□ 0.62
CDC42EP1-201ENST00000249014 COX7A2P14406 83 aa18.91■□□□□ 0.62
CDC42EP1-201ENST00000249014 PTPN2P17706 415 aa18.91■□□□□ 0.62
CDC42EP1-201ENST00000249014 DDX6P26196 483 aaKnown RBP eCLIP18.91■□□□□ 0.62
CDC42EP1-201ENST00000249014 RPS6KA3P51812 740 aa18.91■□□□□ 0.62
CDC42EP1-201ENST00000249014 SRSF11Q05519 484 aaKnown RBP18.91■□□□□ 0.62
CDC42EP1-201ENST00000249014 CD47Q08722 323 aa18.91■□□□□ 0.62
CDC42EP1-201ENST00000249014 GRIN2CQ14957 1233 aa18.91■□□□□ 0.62
CDC42EP1-201ENST00000249014 DPY19L1Q2PZI1 675 aa18.91■□□□□ 0.62
CDC42EP1-201ENST00000249014 ZNF805Q5CZA5 627 aa18.91■□□□□ 0.62
CDC42EP1-201ENST00000249014 C6orf141Q5SZD1 244 aa18.91■□□□□ 0.62
CDC42EP1-201ENST00000249014 BROXQ5VW32 411 aa18.91■□□□□ 0.62
CDC42EP1-201ENST00000249014 CPZQ66K79 652 aa18.91■□□□□ 0.62
CDC42EP1-201ENST00000249014 DPPA4Q7L190 304 aa18.91■□□□□ 0.62
CDC42EP1-201ENST00000249014 DCP2Q8IU60 420 aaKnown RBP18.91■□□□□ 0.62
CDC42EP1-201ENST00000249014 CDC26Q8NHZ8 85 aa18.91■□□□□ 0.62
CDC42EP1-201ENST00000249014 CLP1Q92989 425 aaKnown RBP18.91■□□□□ 0.62
CDC42EP1-201ENST00000249014 GLYATL1Q969I3 302 aa18.91■□□□□ 0.62
CDC42EP1-201ENST00000249014 TMEM159Q96B96 161 aa18.91■□□□□ 0.62
CDC42EP1-201ENST00000249014 TIFAQ96CG3 184 aa18.91■□□□□ 0.62
CDC42EP1-201ENST00000249014 BARD1Q99728 777 aaKnown RBP18.91■□□□□ 0.62
CDC42EP1-201ENST00000249014 LOC100130705A0A1B0GUX0 176 aa18.9■□□□□ 0.62
CDC42EP1-201ENST00000249014 A0A1W2PPW3 197 aa18.9■□□□□ 0.62
CDC42EP1-201ENST00000249014 SLC5A10A0PJK1 596 aa18.9■□□□□ 0.62
CDC42EP1-201ENST00000249014 NPC1O15118 1278 aa18.9■□□□□ 0.62
CDC42EP1-201ENST00000249014 ABCB7O75027 752 aa18.9■□□□□ 0.62
CDC42EP1-201ENST00000249014 SH3BGRLO75368 114 aa18.9■□□□□ 0.62
CDC42EP1-201ENST00000249014 SLC16A8O95907 504 aa18.9■□□□□ 0.62
CDC42EP1-201ENST00000249014 HTR1AP08908 422 aa18.9■□□□□ 0.62
CDC42EP1-201ENST00000249014 LAMP1P11279 417 aa18.9■□□□□ 0.62
CDC42EP1-201ENST00000249014 JUNBP17275 347 aaPredicted RBP18.9■□□□□ 0.62
CDC42EP1-201ENST00000249014 EFNA1P20827 205 aaPredicted RBP18.9■□□□□ 0.62
CDC42EP1-201ENST00000249014 AGXTP21549 392 aa18.9■□□□□ 0.62
CDC42EP1-201ENST00000249014 C16orf72Q14CZ0 275 aa18.9■□□□□ 0.62
CDC42EP1-201ENST00000249014 ZNF284Q2VY69 593 aa18.9■□□□□ 0.62
CDC42EP1-201ENST00000249014 FGD3Q5JSP0 725 aa18.9■□□□□ 0.62
CDC42EP1-201ENST00000249014 ZNF621Q6ZSS3 439 aa18.9■□□□□ 0.62
CDC42EP1-201ENST00000249014 GPR155Q7Z3F1 870 aa18.9■□□□□ 0.62
CDC42EP1-201ENST00000249014 ZZZ3Q8IYH5 903 aa18.9■□□□□ 0.62
CDC42EP1-201ENST00000249014 OR8J2Q8NGG1 315 aa18.9■□□□□ 0.62
CDC42EP1-201ENST00000249014 C3orf18Q9UK00 162 aa18.9■□□□□ 0.62
CDC42EP1-201ENST00000249014 FBXO10Q9UK96 956 aa18.9■□□□□ 0.62
CDC42EP1-201ENST00000249014 SAMD4AQ9UPU9 718 aaKnown RBP18.9■□□□□ 0.62
CDC42EP1-201ENST00000249014 IRAK3Q9Y616 596 aa18.9■□□□□ 0.62
CDC42EP1-201ENST00000249014 LRRK1Q38SD2 2015 aa18.9■□□□□ 0.62
CDC42EP1-201ENST00000249014 ZBBXA8MT70 800 aa18.89■□□□□ 0.62
CDC42EP1-201ENST00000249014 MAGEB17A8MXT2 336 aa18.89■□□□□ 0.62
CDC42EP1-201ENST00000249014 PCSK2P16519 638 aa18.89■□□□□ 0.62
CDC42EP1-201ENST00000249014 GPX2P18283 190 aa18.89■□□□□ 0.62
CDC42EP1-201ENST00000249014 IMPA1P29218 277 aa18.89■□□□□ 0.62
CDC42EP1-201ENST00000249014 PDHA2P29803 388 aa18.89■□□□□ 0.62
CDC42EP1-201ENST00000249014 PRLHRP49683 370 aa18.89■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms