RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 CHRDL2Q6WN34 429 aa10.71□□□□□ -0.69
COPA-201ENST00000241704 SIDT2Q8NBJ9 832 aaKnown RBP10.71□□□□□ -0.69
COPA-201ENST00000241704 SIMC1Q8NDZ2 872 aa10.71□□□□□ -0.69
COPA-201ENST00000241704 OTUB2Q96DC9 234 aa10.71□□□□□ -0.69
COPA-201ENST00000241704 PGAP3Q96FM1 320 aaPredicted RBP10.71□□□□□ -0.69
COPA-201ENST00000241704 ZIC5Q96T25 663 aa10.71□□□□□ -0.69
COPA-201ENST00000241704 WDR26Q9H7D7 661 aa10.71□□□□□ -0.69
COPA-201ENST00000241704 CARS2Q9HA77 564 aaKnown RBP10.71□□□□□ -0.69
COPA-201ENST00000241704 SLC2A6Q9UGQ3 507 aa10.71□□□□□ -0.69
COPA-201ENST00000241704 MKLN1Q9UL63 735 aa10.71□□□□□ -0.69
COPA-201ENST00000241704 POLR1DQ9Y2S0 133 aa10.71□□□□□ -0.69
COPA-201ENST00000241704 B8ZZF3 427 aa10.71□□□□□ -0.69
COPA-201ENST00000241704 PGLSO95336 258 aa10.71□□□□□ -0.69
COPA-201ENST00000241704 PAPSS2O95340 614 aaPredicted RBP10.71□□□□□ -0.69
COPA-201ENST00000241704 AMZ1Q400G9 498 aa10.71□□□□□ -0.69
COPA-201ENST00000241704 TRIQKQ629K1 86 aa10.71□□□□□ -0.69
COPA-201ENST00000241704 CLEC6AQ6EIG7 209 aa10.71□□□□□ -0.69
COPA-201ENST00000241704 PM20D1Q6GTS8 502 aa10.71□□□□□ -0.69
COPA-201ENST00000241704 GLYATQ6IB77 296 aa10.71□□□□□ -0.69
COPA-201ENST00000241704 DESI1Q6ICB0 168 aa10.71□□□□□ -0.69
COPA-201ENST00000241704 GDPD4Q6W3E5 623 aa10.71□□□□□ -0.69
COPA-201ENST00000241704 LRRTM3Q86VH5 581 aa10.71□□□□□ -0.69
COPA-201ENST00000241704 ZNF778Q96MU6 729 aa10.71□□□□□ -0.69
COPA-201ENST00000241704 ITM2CQ9NQX7 267 aa10.71□□□□□ -0.69
COPA-201ENST00000241704 TMLHEQ9NVH6 421 aa10.71□□□□□ -0.69
COPA-201ENST00000241704 PCDHGA7Q9Y5G6 932 aa10.71□□□□□ -0.69
COPA-201ENST00000241704 CNTRLQ7Z7A1 2325 aa10.71□□□□□ -0.69
COPA-201ENST00000241704 EDDM13A0A1B0GTR0 161 aa10.71□□□□□ -0.7
COPA-201ENST00000241704 A0A1W2PRG6 482 aa10.71□□□□□ -0.7
COPA-201ENST00000241704 PRORSD1PA6NEY8 169 aa10.71□□□□□ -0.7
COPA-201ENST00000241704 UROSP10746 265 aa10.71□□□□□ -0.7
COPA-201ENST00000241704 NCK1P16333 377 aa10.71□□□□□ -0.7
COPA-201ENST00000241704 HSPA7P48741 367 aa10.71□□□□□ -0.7
COPA-201ENST00000241704 RAB25P57735 213 aa10.71□□□□□ -0.7
COPA-201ENST00000241704 CYP4F2P78329 520 aa10.71□□□□□ -0.7
COPA-201ENST00000241704 NAE1Q13564 534 aa10.71□□□□□ -0.7
COPA-201ENST00000241704 MEP1AQ16819 746 aa10.71□□□□□ -0.7
COPA-201ENST00000241704 RBM20Q5T481 1227 aaKnown RBP10.71□□□□□ -0.7
COPA-201ENST00000241704 SULT1C3Q6IMI6 304 aa10.71□□□□□ -0.7
COPA-201ENST00000241704 ZNF549Q6P9A3 640 aa10.71□□□□□ -0.7
COPA-201ENST00000241704 BPHLQ86WA6 291 aaPredicted RBP10.71□□□□□ -0.7
COPA-201ENST00000241704 TICAM1Q8IUC6 712 aa10.71□□□□□ -0.7
COPA-201ENST00000241704 GRAMD2AQ8IUY3 354 aa10.71□□□□□ -0.7
COPA-201ENST00000241704 OR13J1Q8NGT2 312 aa10.71□□□□□ -0.7
COPA-201ENST00000241704 SGIP1Q9BQI5 828 aa10.71□□□□□ -0.7
COPA-201ENST00000241704 RERGLQ9H628 205 aa10.71□□□□□ -0.7
COPA-201ENST00000241704 MRM3Q9HC36 420 aaKnown RBP10.71□□□□□ -0.7
COPA-201ENST00000241704 SNX7Q9UNH6 387 aa10.71□□□□□ -0.7
COPA-201ENST00000241704 TMX2-CTNND1H3BSU7 103 aa10.7□□□□□ -0.7
COPA-201ENST00000241704 ACOT8O14734 319 aa10.7□□□□□ -0.7
COPA-201ENST00000241704 GJB5O95377 273 aa10.7□□□□□ -0.7
COPA-201ENST00000241704 MTHFD1P11586 935 aaKnown RBP10.7□□□□□ -0.7
COPA-201ENST00000241704 IMPDH1P20839 514 aa10.7□□□□□ -0.7
COPA-201ENST00000241704 ANGPT1Q15389 498 aa10.7□□□□□ -0.7
COPA-201ENST00000241704 CLLU1OSQ5K130 101 aa10.7□□□□□ -0.7
COPA-201ENST00000241704 C6orf141Q5SZD1 244 aa10.7□□□□□ -0.7
COPA-201ENST00000241704 TMPRSS11BQ86T26 416 aa10.7□□□□□ -0.7
COPA-201ENST00000241704 TP53INP1Q96A56 240 aa10.7□□□□□ -0.7
COPA-201ENST00000241704 AURKBQ96GD4 344 aaPredicted RBP10.7□□□□□ -0.7
COPA-201ENST00000241704 MAELQ96JY0 434 aaKnown RBP10.7□□□□□ -0.7
COPA-201ENST00000241704 LMLNQ96KR4 655 aa10.7□□□□□ -0.7
COPA-201ENST00000241704 AIFM2Q9BRQ8 373 aa10.7□□□□□ -0.7
COPA-201ENST00000241704 PRRG3Q9BZD7 231 aa10.7□□□□□ -0.7
COPA-201ENST00000241704 NSUN3Q9H649 340 aaKnown RBP10.7□□□□□ -0.7
COPA-201ENST00000241704 ZNF490Q9ULM2 529 aaPredicted RBP10.7□□□□□ -0.7
COPA-201ENST00000241704 GRIP1Q9Y3R0 1128 aa10.7□□□□□ -0.7
COPA-201ENST00000241704 MYH9P35579 1960 aaKnown RBP10.7□□□□□ -0.7
COPA-201ENST00000241704 FAM220BPB1ANY3 271 aa10.7□□□□□ -0.7
COPA-201ENST00000241704 I3L521 148 aa10.7□□□□□ -0.7
COPA-201ENST00000241704 UGT2B11O75310 529 aa10.7□□□□□ -0.7
COPA-201ENST00000241704 CLDN9O95484 217 aa10.7□□□□□ -0.7
COPA-201ENST00000241704 EPORP19235 508 aa10.7□□□□□ -0.7
COPA-201ENST00000241704 DNAJB1P25685 340 aa10.7□□□□□ -0.7
COPA-201ENST00000241704 GABARAPL2P60520 117 aa10.7□□□□□ -0.7
COPA-201ENST00000241704 STX4Q12846 297 aa10.7□□□□□ -0.7
COPA-201ENST00000241704 SELPLGQ14242 412 aa10.7□□□□□ -0.7
COPA-201ENST00000241704 ATP13A5Q4VNC0 1218 aa10.7□□□□□ -0.7
COPA-201ENST00000241704 TMEM164Q5U3C3 297 aa10.7□□□□□ -0.7
COPA-201ENST00000241704 AGAP6Q5VW22 663 aa10.7□□□□□ -0.7
COPA-201ENST00000241704 RAD51AP1Q96B01 352 aa10.7□□□□□ -0.7
COPA-201ENST00000241704 ZNF514Q96K75 400 aaPredicted RBP10.7□□□□□ -0.7
COPA-201ENST00000241704 AGAP4Q96P64 663 aa10.7□□□□□ -0.7
COPA-201ENST00000241704 P2RY13Q9BPV8 354 aa10.7□□□□□ -0.7
COPA-201ENST00000241704 ROGDIQ9GZN7 287 aa10.7□□□□□ -0.7
COPA-201ENST00000241704 ZNF840PA6NDX5 716 aa10.7□□□□□ -0.7
COPA-201ENST00000241704 H3BQ06 376 aaPredicted RBP10.7□□□□□ -0.7
COPA-201ENST00000241704 ITGB1P05556 798 aa10.7□□□□□ -0.7
COPA-201ENST00000241704 IL7P13232 177 aa10.7□□□□□ -0.7
COPA-201ENST00000241704 BIKQ13323 160 aa10.7□□□□□ -0.7
COPA-201ENST00000241704 NPTX1Q15818 432 aa10.7□□□□□ -0.7
COPA-201ENST00000241704 MZT2BQ6NZ67 158 aa10.7□□□□□ -0.7
COPA-201ENST00000241704 PAQR3Q6TCH7 311 aa10.7□□□□□ -0.7
COPA-201ENST00000241704 HDDC2Q7Z4H3 204 aa10.7□□□□□ -0.7
COPA-201ENST00000241704 FAM20CQ8IXL6 584 aa10.7□□□□□ -0.7
COPA-201ENST00000241704 FAM109AQ8N4B1 249 aa10.7□□□□□ -0.7
COPA-201ENST00000241704 SRFBP1Q8NEF9 429 aaKnown RBP10.7□□□□□ -0.7
COPA-201ENST00000241704 OR6Q1Q8NGQ2 317 aa10.7□□□□□ -0.7
COPA-201ENST00000241704 FEM1AQ9BSK4 669 aa10.7□□□□□ -0.7
COPA-201ENST00000241704 HOXD1Q9GZZ0 328 aa10.7□□□□□ -0.7
COPA-201ENST00000241704 ATG10Q9H0Y0 220 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms