RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 PCNAP12004 261 aa19.98■□□□□ 0.79
SNX3-201ENST00000230085 FMO4P31512 558 aa19.98■□□□□ 0.79
SNX3-201ENST00000230085 EIF2DP41214 584 aaKnown RBP19.98■□□□□ 0.79
SNX3-201ENST00000230085 ST13P50502 369 aaKnown RBP19.98■□□□□ 0.79
SNX3-201ENST00000230085 PHC1P78364 1004 aa19.98■□□□□ 0.79
SNX3-201ENST00000230085 AP5B1Q2VPB7 878 aa19.98■□□□□ 0.79
SNX3-201ENST00000230085 SPESP1Q6UW49 350 aa19.98■□□□□ 0.79
SNX3-201ENST00000230085 CCDC80Q76M96 950 aa19.98■□□□□ 0.79
SNX3-201ENST00000230085 METTL6Q8TCB7 284 aa19.98■□□□□ 0.79
SNX3-201ENST00000230085 IPCEF1Q8WWN9 437 aaPredicted RBP19.98■□□□□ 0.79
SNX3-201ENST00000230085 CLMPQ9H6B4 373 aa19.98■□□□□ 0.79
SNX3-201ENST00000230085 KAT8Q9H7Z6 458 aaKnown RBP19.98■□□□□ 0.79
SNX3-201ENST00000230085 KIF26AQ9ULI4 1882 aaPredicted RBP19.97■□□□□ 0.79
SNX3-201ENST00000230085 NCOR1O75376 2440 aa19.97■□□□□ 0.79
SNX3-201ENST00000230085 MUSKO15146 869 aa19.97■□□□□ 0.79
SNX3-201ENST00000230085 ESR1P03372 595 aa19.97■□□□□ 0.79
SNX3-201ENST00000230085 CAPN1P07384 714 aa19.97■□□□□ 0.79
SNX3-201ENST00000230085 HOXB9P17482 250 aaPredicted RBP19.97■□□□□ 0.79
SNX3-201ENST00000230085 EFNA1P20827 205 aaPredicted RBP19.97■□□□□ 0.79
SNX3-201ENST00000230085 PTPRNQ16849 979 aa19.97■□□□□ 0.79
SNX3-201ENST00000230085 ZNF181Q2M3W8 571 aa19.97■□□□□ 0.79
SNX3-201ENST00000230085 INAVAQ3KP66 663 aa19.97■□□□□ 0.79
SNX3-201ENST00000230085 PLEKHG6Q3KR16 790 aa19.97■□□□□ 0.79
SNX3-201ENST00000230085 CPZQ66K79 652 aa19.97■□□□□ 0.79
SNX3-201ENST00000230085 NADSYN1Q6IA69 706 aa19.97■□□□□ 0.79
SNX3-201ENST00000230085 TRIM46Q7Z4K8 759 aa19.97■□□□□ 0.79
SNX3-201ENST00000230085 ADAMTSL2Q86TH1 951 aa19.97■□□□□ 0.79
SNX3-201ENST00000230085 MCOLN3Q8TDD5 553 aa19.97■□□□□ 0.79
SNX3-201ENST00000230085 FIG4Q92562 907 aa19.97■□□□□ 0.79
SNX3-201ENST00000230085 FCGR1BQ92637 280 aa19.97■□□□□ 0.79
SNX3-201ENST00000230085 ASPSCR1Q9BZE9 553 aa19.97■□□□□ 0.79
SNX3-201ENST00000230085 SCN3BQ9NY72 215 aa19.97■□□□□ 0.79
SNX3-201ENST00000230085 MUTYHQ9UIF7 546 aa19.97■□□□□ 0.79
SNX3-201ENST00000230085 EIF3LQ9Y262 564 aaKnown RBP19.97■□□□□ 0.79
SNX3-201ENST00000230085 ANKRD12Q6UB98 2062 aa19.97■□□□□ 0.79
SNX3-201ENST00000230085 UBA6A0AVT1 1052 aaPredicted RBP19.96■□□□□ 0.79
SNX3-201ENST00000230085 SLC28A1O00337 649 aa19.96■□□□□ 0.79
SNX3-201ENST00000230085 OR7A17O14581 309 aa19.96■□□□□ 0.79
SNX3-201ENST00000230085 GNGT2O14610 69 aa19.96■□□□□ 0.79
SNX3-201ENST00000230085 PRMT5O14744 637 aaPredicted RBP19.96■□□□□ 0.79
SNX3-201ENST00000230085 SLC9A3R1O14745 358 aaPredicted RBP19.96■□□□□ 0.79
SNX3-201ENST00000230085 ACSL4O60488 711 aa19.96■□□□□ 0.79
SNX3-201ENST00000230085 CREG1O75629 220 aa19.96■□□□□ 0.79
SNX3-201ENST00000230085 SLC11A2P49281 568 aa19.96■□□□□ 0.79
SNX3-201ENST00000230085 TRAF3Q13114 568 aa19.96■□□□□ 0.79
SNX3-201ENST00000230085 ZNF235Q14590 738 aa19.96■□□□□ 0.79
SNX3-201ENST00000230085 NR6A1Q15406 480 aa19.96■□□□□ 0.79
SNX3-201ENST00000230085 LDLRAP1Q5SW96 308 aa19.96■□□□□ 0.79
SNX3-201ENST00000230085 ADGRF1Q5T601 910 aa19.96■□□□□ 0.79
SNX3-201ENST00000230085 FBXL22Q6P050 247 aa19.96■□□□□ 0.79
SNX3-201ENST00000230085 ARMC8Q8IUR7 673 aa19.96■□□□□ 0.79
SNX3-201ENST00000230085 OR52B6Q8NGF0 335 aa19.96■□□□□ 0.79
SNX3-201ENST00000230085 FBXO30Q8TB52 745 aa19.96■□□□□ 0.79
SNX3-201ENST00000230085 IRF7Q92985 503 aa19.96■□□□□ 0.79
SNX3-201ENST00000230085 PITX2Q99697 317 aa19.96■□□□□ 0.79
SNX3-201ENST00000230085 MMP27Q9H306 513 aa19.96■□□□□ 0.79
SNX3-201ENST00000230085 MOV10Q9HCE1 1003 aaKnown RBP19.96■□□□□ 0.79
SNX3-201ENST00000230085 SLC25A37Q9NYZ2 338 aa19.96■□□□□ 0.79
SNX3-201ENST00000230085 CD274Q9NZQ7 290 aa19.96■□□□□ 0.79
SNX3-201ENST00000230085 STOML2Q9UJZ1 356 aa19.96■□□□□ 0.79
SNX3-201ENST00000230085 HS6ST1O60243 411 aa19.95■□□□□ 0.78
SNX3-201ENST00000230085 NOBOXO60393 691 aa19.95■□□□□ 0.78
SNX3-201ENST00000230085 SLC6A4P31645 630 aa19.95■□□□□ 0.78
SNX3-201ENST00000230085 IST1P53990 364 aa19.95■□□□□ 0.78
SNX3-201ENST00000230085 PTPRCAPQ14761 206 aa19.95■□□□□ 0.78
SNX3-201ENST00000230085 CLCA4Q14CN2 919 aa19.95■□□□□ 0.78
SNX3-201ENST00000230085 MAPKAPK3Q16644 382 aa19.95■□□□□ 0.78
SNX3-201ENST00000230085 CTSL3PQ5NE16 218 aa19.95■□□□□ 0.78
SNX3-201ENST00000230085 UBE2UQ5VVX9 321 aa19.95■□□□□ 0.78
SNX3-201ENST00000230085 KDM4DQ6B0I6 523 aa19.95■□□□□ 0.78
SNX3-201ENST00000230085 IL27RAQ6UWB1 636 aa19.95■□□□□ 0.78
SNX3-201ENST00000230085 TPGS1Q6ZTW0 290 aa19.95■□□□□ 0.78
SNX3-201ENST00000230085 B3GNT8Q7Z7M8 397 aa19.95■□□□□ 0.78
SNX3-201ENST00000230085 TMEM179BQ7Z7N9 219 aa19.95■□□□□ 0.78
SNX3-201ENST00000230085 STK40Q8N2I9 435 aa19.95■□□□□ 0.78
SNX3-201ENST00000230085 OR10A6Q8NH74 314 aa19.95■□□□□ 0.78
SNX3-201ENST00000230085 IGSF8Q969P0 613 aa19.95■□□□□ 0.78
SNX3-201ENST00000230085 FAM162AQ96A26 154 aa19.95■□□□□ 0.78
SNX3-201ENST00000230085 OTUB2Q96DC9 234 aa19.95■□□□□ 0.78
SNX3-201ENST00000230085 PYURFQ96I23 114 aa19.95■□□□□ 0.78
SNX3-201ENST00000230085 PSKH2Q96QS6 385 aa19.95■□□□□ 0.78
SNX3-201ENST00000230085 C19orf43Q9BQ61 176 aa19.95■□□□□ 0.78
SNX3-201ENST00000230085 NXF2Q9GZY0 626 aaKnown RBP19.95■□□□□ 0.78
SNX3-201ENST00000230085 PIF1Q9H611 641 aa19.95■□□□□ 0.78
SNX3-201ENST00000230085 DUSP12Q9UNI6 340 aa19.95■□□□□ 0.78
SNX3-201ENST00000230085 ASB1Q9Y576 335 aa19.95■□□□□ 0.78
SNX3-201ENST00000230085 WNT9AO14904 365 aa19.95■□□□□ 0.78
SNX3-201ENST00000230085 RGS14O43566 566 aa19.95■□□□□ 0.78
SNX3-201ENST00000230085 SRFP11831 508 aa19.95■□□□□ 0.78
SNX3-201ENST00000230085 GSSP48637 474 aa19.95■□□□□ 0.78
SNX3-201ENST00000230085 HTR6P50406 440 aa19.95■□□□□ 0.78
SNX3-201ENST00000230085 DGKQP52824 942 aa19.95■□□□□ 0.78
SNX3-201ENST00000230085 CD300CQ08708 224 aa19.95■□□□□ 0.78
SNX3-201ENST00000230085 SELENBP1Q13228 472 aa19.95■□□□□ 0.78
SNX3-201ENST00000230085 RAPSNQ13702 412 aa19.95■□□□□ 0.78
SNX3-201ENST00000230085 RUNX3Q13761 415 aa19.95■□□□□ 0.78
SNX3-201ENST00000230085 PDGFRLQ15198 375 aa19.95■□□□□ 0.78
SNX3-201ENST00000230085 KCNJ8Q15842 424 aa19.95■□□□□ 0.78
SNX3-201ENST00000230085 TTLL9Q3SXZ7 439 aa19.95■□□□□ 0.78
SNX3-201ENST00000230085 RFTN2Q52LD8 501 aaPredicted RBP19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms