RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 RHBDF1Q96CC6 855 aa9.15□□□□□ -0.94
HLA-DOA-201ENST00000229829 KCNS3Q9BQ31 491 aa9.15□□□□□ -0.94
HLA-DOA-201ENST00000229829 RHNO1Q9BSD3 238 aa9.15□□□□□ -0.94
HLA-DOA-201ENST00000229829 P2RY12Q9H244 342 aa9.15□□□□□ -0.94
HLA-DOA-201ENST00000229829 DNAJB9Q9UBS3 223 aa9.15□□□□□ -0.94
HLA-DOA-201ENST00000229829 EFCAB9A8MZ26 197 aa9.15□□□□□ -0.95
HLA-DOA-201ENST00000229829 EVPLLA8MZ36 301 aa9.15□□□□□ -0.95
HLA-DOA-201ENST00000229829 ADAMTS4O75173 837 aa9.15□□□□□ -0.95
HLA-DOA-201ENST00000229829 UPK1BO75841 260 aa9.15□□□□□ -0.95
HLA-DOA-201ENST00000229829 MED26O95402 600 aa9.15□□□□□ -0.95
HLA-DOA-201ENST00000229829 PAPLNO95428 1278 aa9.15□□□□□ -0.95
HLA-DOA-201ENST00000229829 ANGPTL1O95841 491 aa9.15□□□□□ -0.95
HLA-DOA-201ENST00000229829 RHOCP08134 193 aa9.15□□□□□ -0.95
HLA-DOA-201ENST00000229829 IRF1P10914 325 aa9.15□□□□□ -0.95
HLA-DOA-201ENST00000229829 ISL1P61371 349 aa9.15□□□□□ -0.95
HLA-DOA-201ENST00000229829 SEMG2Q02383 582 aa9.15□□□□□ -0.95
HLA-DOA-201ENST00000229829 PCBP2Q15366 365 aaKnown RBP eCLIP9.15□□□□□ -0.95
HLA-DOA-201ENST00000229829 SPANXN2Q5MJ10 180 aa9.15□□□□□ -0.95
HLA-DOA-201ENST00000229829 RTP2Q5QGT7 225 aa9.15□□□□□ -0.95
HLA-DOA-201ENST00000229829 ATXN7L2Q5T6C5 722 aaPredicted RBP9.15□□□□□ -0.95
HLA-DOA-201ENST00000229829 TAS1R1Q7RTX1 841 aa9.15□□□□□ -0.95
HLA-DOA-201ENST00000229829 ANKRD46Q86W74 232 aa9.15□□□□□ -0.95
HLA-DOA-201ENST00000229829 AMIGO1Q86WK6 493 aa9.15□□□□□ -0.95
HLA-DOA-201ENST00000229829 METTL4Q8N3J2 472 aa9.15□□□□□ -0.95
HLA-DOA-201ENST00000229829 MFSD4AQ8N468 514 aa9.15□□□□□ -0.95
HLA-DOA-201ENST00000229829 HCAR2Q8TDS4 363 aa9.15□□□□□ -0.95
HLA-DOA-201ENST00000229829 FAM162AQ96A26 154 aa9.15□□□□□ -0.95
HLA-DOA-201ENST00000229829 FAM193BQ96PV7 902 aaPredicted RBP9.15□□□□□ -0.95
HLA-DOA-201ENST00000229829 GORASP2Q9H8Y8 452 aa9.15□□□□□ -0.95
HLA-DOA-201ENST00000229829 ZBTB20Q9HC78 741 aaPredicted RBP9.15□□□□□ -0.95
HLA-DOA-201ENST00000229829 NUDT4Q9NZJ9 180 aa9.15□□□□□ -0.95
HLA-DOA-201ENST00000229829 NUFIP1Q9UHK0 495 aaKnown RBP9.15□□□□□ -0.95
HLA-DOA-201ENST00000229829 POLHQ9Y253 713 aa9.15□□□□□ -0.95
HLA-DOA-201ENST00000229829 DHRS7Q9Y394 339 aa9.15□□□□□ -0.95
HLA-DOA-201ENST00000229829 PDE4DIPQ5VU43 2346 aa9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 A0A1W2PPC1 479 aa9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 ELOVL7A1L3X0 281 aa9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 CXCR6O00574 342 aa9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 FAM20BO75063 409 aa9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 ESR1P03372 595 aa9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 PGRP06401 933 aa9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 MSH3P20585 1137 aa9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 GSTM2P28161 218 aa9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 CLCN4P51793 760 aa9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 GP2P55259 537 aaKnown RBP9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 TRIM71Q2Q1W2 868 aaKnown RBP9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 SOWAHCQ53LP3 525 aaPredicted RBP9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 TPRG1LQ5T0D9 272 aa9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 RNF219Q5W0B1 726 aaPredicted RBP9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 AHSA2Q719I0 299 aa9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 DET1Q7L5Y6 550 aa9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 TMEM173Q86WV6 379 aaPredicted RBP9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 OR8J3Q8NGG0 315 aa9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 LGALS12Q96DT0 336 aa9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 YME1L1Q96TA2 773 aa9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 PHOX2BQ99453 314 aa9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 EGFL8Q99944 293 aa9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 ACAT2Q9BWD1 397 aa9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 UGT2B28Q9BY64 529 aa9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 CPNE5Q9HCH3 593 aa9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 VNN3Q9NY84 501 aa9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 IL17CQ9P0M4 197 aa9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 CRNNQ9UBG3 495 aaPredicted RBP9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 MAU2Q9Y6X3 613 aa9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 LOC100130705A0A1B0GUX0 176 aa9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 I3L521 148 aa9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 hCG_2039718K7EN88 272 aa9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 ADAM12O43184 909 aa9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 NOS1APO75052 506 aaPredicted RBP9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 SEC22BO75396 215 aa9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 ZDHHC11BP0C7U3 371 aa9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 DCTP40126 519 aa9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 PTGER3P43115 390 aa9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 CDH4P55283 916 aa9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 HUNKP57058 714 aa9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 MRPL58Q14197 206 aaKnown RBP9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 NPTX1Q15818 432 aa9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 C5orf22Q49AR2 442 aa9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 RBM48Q5RL73 367 aaKnown RBP9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 TTC23Q5W5X9 447 aa9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 ZNF544Q6NX49 715 aa9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 PRSS55Q6UWB4 352 aaPredicted RBP9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 RGL4Q8IZJ4 473 aa9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 SVOPQ8N4V2 548 aa9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 GLB1L3Q8NCI6 653 aaPredicted RBP9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 CNDP2Q96KP4 475 aaKnown RBP9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 MYOCQ99972 504 aa9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 DPY30Q9C005 99 aa9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 ABCG8Q9H221 673 aa9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 NARFLQ9H6Q4 476 aa9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 SP140LQ9H930 580 aa9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 RANGRFQ9HD47 186 aaPredicted RBP9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 TMEFF2Q9UIK5 374 aaPredicted RBP9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 FCF1Q9Y324 198 aaKnown RBP9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 PCDHB14Q9Y5E9 798 aa9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 SAGE2PA6NJ88 616 aa9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 FAM25AB3EWG3 89 aa9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 FAM25CB3EWG5 89 aa9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 FAM25GB3EWG6 89 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms