RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 TSEN34Q9BSV6 310 aaKnown RBP13.7□□□□□ -0.22
SF1-201ENST00000227503 AARSD1Q9BTE6 412 aaKnown RBP13.7□□□□□ -0.22
SF1-201ENST00000227503 AREL1O15033 823 aa13.7□□□□□ -0.22
SF1-201ENST00000227503 KERAO60938 352 aa13.7□□□□□ -0.22
SF1-201ENST00000227503 RPP40O75818 363 aaKnown RBP13.7□□□□□ -0.22
SF1-201ENST00000227503 HOXB8P17481 243 aaPredicted RBP13.7□□□□□ -0.22
SF1-201ENST00000227503 SSTR4P31391 388 aa13.7□□□□□ -0.22
SF1-201ENST00000227503 THPOP40225 353 aa13.7□□□□□ -0.22
SF1-201ENST00000227503 PBX3P40426 434 aa13.7□□□□□ -0.22
SF1-201ENST00000227503 SERINC3Q13530 473 aa13.7□□□□□ -0.22
SF1-201ENST00000227503 MRNIPQ6NTE8 343 aa13.7□□□□□ -0.22
SF1-201ENST00000227503 SLC46A3Q7Z3Q1 461 aa13.7□□□□□ -0.22
SF1-201ENST00000227503 ABI3BPQ7Z7G0 1075 aa13.7□□□□□ -0.22
SF1-201ENST00000227503 CACTIN-AS1Q8N1I8 211 aa13.7□□□□□ -0.22
SF1-201ENST00000227503 FAM109AQ8N4B1 249 aa13.7□□□□□ -0.22
SF1-201ENST00000227503 ZNF557Q8N988 423 aaPredicted RBP13.7□□□□□ -0.22
SF1-201ENST00000227503 STAG3L4Q8TBR4 150 aa13.7□□□□□ -0.22
SF1-201ENST00000227503 ZNF675Q8TD23 568 aa13.7□□□□□ -0.22
SF1-201ENST00000227503 UCK2Q9BZX2 261 aa13.7□□□□□ -0.22
SF1-201ENST00000227503 MKRN2Q9H000 416 aaKnown RBP13.7□□□□□ -0.22
SF1-201ENST00000227503 SLA2Q9H6Q3 261 aa13.7□□□□□ -0.22
SF1-201ENST00000227503 EXOSC4Q9NPD3 245 aaKnown RBP13.7□□□□□ -0.22
SF1-201ENST00000227503 CD274Q9NZQ7 290 aa13.7□□□□□ -0.22
SF1-201ENST00000227503 PCDH10Q9P2E7 1040 aa13.7□□□□□ -0.22
SF1-201ENST00000227503 RAPGEFL1Q9UHV5 662 aa13.7□□□□□ -0.22
SF1-201ENST00000227503 TEKT2Q9UIF3 430 aa13.7□□□□□ -0.22
SF1-201ENST00000227503 A0A1W2PQ09 198 aa13.69□□□□□ -0.22
SF1-201ENST00000227503 DRGXA6NNA5 263 aa13.69□□□□□ -0.22
SF1-201ENST00000227503 A8MUA0 341 aa13.69□□□□□ -0.22
SF1-201ENST00000227503 TLR5O60602 858 aa13.69□□□□□ -0.22
SF1-201ENST00000227503 YES1P07947 543 aa13.69□□□□□ -0.22
SF1-201ENST00000227503 ADRA2AP08913 450 aa13.69□□□□□ -0.22
SF1-201ENST00000227503 IL7P13232 177 aa13.69□□□□□ -0.22
SF1-201ENST00000227503 UGT2B10P36537 528 aa13.69□□□□□ -0.22
SF1-201ENST00000227503 ACVRL1P37023 503 aa13.69□□□□□ -0.22
SF1-201ENST00000227503 PIK3CBP42338 1070 aa13.69□□□□□ -0.22
SF1-201ENST00000227503 FKBP1BP68106 108 aa13.69□□□□□ -0.22
SF1-201ENST00000227503 VLDLRP98155 873 aa13.69□□□□□ -0.22
SF1-201ENST00000227503 SMARCB1Q12824 385 aa13.69□□□□□ -0.22
SF1-201ENST00000227503 IL18R1Q13478 541 aa13.69□□□□□ -0.22
SF1-201ENST00000227503 DUSP7Q16829 419 aa13.69□□□□□ -0.22
SF1-201ENST00000227503 GPAT3Q53EU6 434 aa13.69□□□□□ -0.22
SF1-201ENST00000227503 SHQ1Q6PI26 577 aaKnown RBP13.69□□□□□ -0.22
SF1-201ENST00000227503 LAX1Q8IWV1 398 aa13.69□□□□□ -0.22
SF1-201ENST00000227503 SLC7A6Q92536 515 aa13.69□□□□□ -0.22
SF1-201ENST00000227503 MYEOVQ96EZ4 313 aa13.69□□□□□ -0.22
SF1-201ENST00000227503 CYP2S1Q96SQ9 504 aa13.69□□□□□ -0.22
SF1-201ENST00000227503 SLC30A2Q9BRI3 323 aa13.69□□□□□ -0.22
SF1-201ENST00000227503 INPP5KQ9BT40 448 aa13.69□□□□□ -0.22
SF1-201ENST00000227503 NDRG4Q9ULP0 352 aaKnown RBP13.69□□□□□ -0.22
SF1-201ENST00000227503 MED16Q9Y2X0 877 aa13.69□□□□□ -0.22
SF1-201ENST00000227503 SAMHD1Q9Y3Z3 626 aaKnown RBP13.69□□□□□ -0.22
SF1-201ENST00000227503 NINQ8N4C6 2090 aa13.69□□□□□ -0.22
SF1-201ENST00000227503 RAMP2O60895 175 aa13.69□□□□□ -0.22
SF1-201ENST00000227503 FGF1P05230 155 aa13.69□□□□□ -0.22
SF1-201ENST00000227503 HLA-DPA1P20036 260 aa13.69□□□□□ -0.22
SF1-201ENST00000227503 MSH3P20585 1137 aa13.69□□□□□ -0.22
SF1-201ENST00000227503 GRK4P32298 578 aa13.69□□□□□ -0.22
SF1-201ENST00000227503 IDH2P48735 452 aaKnown RBP13.69□□□□□ -0.22
SF1-201ENST00000227503 STC1P52823 247 aa13.69□□□□□ -0.22
SF1-201ENST00000227503 EFR3AQ14156 821 aa13.69□□□□□ -0.22
SF1-201ENST00000227503 KDM4DQ6B0I6 523 aa13.69□□□□□ -0.22
SF1-201ENST00000227503 CCDC190Q86UF4 302 aa13.69□□□□□ -0.22
SF1-201ENST00000227503 SLC44A2Q8IWA5 706 aaPredicted RBP13.69□□□□□ -0.22
SF1-201ENST00000227503 SIDT2Q8NBJ9 832 aaKnown RBP13.69□□□□□ -0.22
SF1-201ENST00000227503 OR4L1Q8NH43 312 aa13.69□□□□□ -0.22
SF1-201ENST00000227503 BRSK1Q8TDC3 778 aa13.69□□□□□ -0.22
SF1-201ENST00000227503 MTFMTQ96DP5 389 aaKnown RBP13.69□□□□□ -0.22
SF1-201ENST00000227503 FAM120BQ96EK7 910 aaKnown RBP13.69□□□□□ -0.22
SF1-201ENST00000227503 PYURFQ96I23 114 aa13.69□□□□□ -0.22
SF1-201ENST00000227503 C8orf48Q96LL4 319 aa13.69□□□□□ -0.22
SF1-201ENST00000227503 CCDC115Q96NT0 180 aa13.69□□□□□ -0.22
SF1-201ENST00000227503 OR5M11Q96RB7 305 aa13.69□□□□□ -0.22
SF1-201ENST00000227503 POLR1EQ9GZS1 481 aaKnown RBP13.69□□□□□ -0.22
SF1-201ENST00000227503 RERGLQ9H628 205 aa13.69□□□□□ -0.22
SF1-201ENST00000227503 CATSPERZQ9NTU4 200 aa13.69□□□□□ -0.22
SF1-201ENST00000227503 MN1Q10571 1320 aaPredicted RBP13.69□□□□□ -0.22
SF1-201ENST00000227503 PLXNA3P51805 1871 aa13.69□□□□□ -0.22
SF1-201ENST00000227503 GPR39O43194 453 aa13.69□□□□□ -0.22
SF1-201ENST00000227503 OR1I1O60431 355 aa13.69□□□□□ -0.22
SF1-201ENST00000227503 ZNF780AO75290 641 aaPredicted RBP13.69□□□□□ -0.22
SF1-201ENST00000227503 EPOP01588 193 aa13.69□□□□□ -0.22
SF1-201ENST00000227503 CCNYL3P0C7X3 344 aa13.69□□□□□ -0.22
SF1-201ENST00000227503 POU3F3P20264 500 aaPredicted RBP13.69□□□□□ -0.22
SF1-201ENST00000227503 OGNP20774 298 aaKnown RBP13.69□□□□□ -0.22
SF1-201ENST00000227503 ZNF551Q7Z340 670 aaPredicted RBP13.69□□□□□ -0.22
SF1-201ENST00000227503 VN1R5Q7Z5H4 357 aa13.69□□□□□ -0.22
SF1-201ENST00000227503 ZNF598Q86UK7 904 aaKnown RBP13.69□□□□□ -0.22
SF1-201ENST00000227503 SLC43A3Q8NBI5 491 aa13.69□□□□□ -0.22
SF1-201ENST00000227503 OR8J3Q8NGG0 315 aa13.69□□□□□ -0.22
SF1-201ENST00000227503 KIAA1191Q96A73 305 aa13.69□□□□□ -0.22
SF1-201ENST00000227503 NXF2Q9GZY0 626 aaKnown RBP13.69□□□□□ -0.22
SF1-201ENST00000227503 FBXO44Q9H4M3 255 aa13.69□□□□□ -0.22
SF1-201ENST00000227503 RABL2AQ9UBK7 228 aaPredicted RBP13.69□□□□□ -0.22
SF1-201ENST00000227503 ZNF490Q9ULM2 529 aaPredicted RBP13.69□□□□□ -0.22
SF1-201ENST00000227503 SATB2Q9UPW6 733 aa13.69□□□□□ -0.22
SF1-201ENST00000227503 PEX16Q9Y5Y5 336 aa13.69□□□□□ -0.22
SF1-201ENST00000227503 IQCF5A8MTL0 148 aa13.68□□□□□ -0.22
SF1-201ENST00000227503 NIPSNAP2O75323 286 aa13.68□□□□□ -0.22
SF1-201ENST00000227503 OAZ2O95190 189 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms