RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 DNAJC25-GNG10A0A024R161 153 aa11.22□□□□□ -0.61
NOD1-201ENST00000222823 ERI3O43414 337 aaKnown RBP11.22□□□□□ -0.61
NOD1-201ENST00000222823 GMFGO60234 142 aa11.22□□□□□ -0.61
NOD1-201ENST00000222823 BEST1O76090 585 aa11.22□□□□□ -0.61
NOD1-201ENST00000222823 UFM1P61960 85 aa11.22□□□□□ -0.61
NOD1-201ENST00000222823 RHDQ02161 417 aa11.22□□□□□ -0.61
NOD1-201ENST00000222823 MXD1Q05195 221 aa11.22□□□□□ -0.61
NOD1-201ENST00000222823 SLC10A2Q12908 348 aaPredicted RBP11.22□□□□□ -0.61
NOD1-201ENST00000222823 SCARB2Q14108 478 aa11.22□□□□□ -0.61
NOD1-201ENST00000222823 PLEKHG6Q3KR16 790 aa11.22□□□□□ -0.61
NOD1-201ENST00000222823 ANO7Q6IWH7 933 aa11.22□□□□□ -0.61
NOD1-201ENST00000222823 SLC2A7Q6PXP3 512 aa11.22□□□□□ -0.61
NOD1-201ENST00000222823 PDPRQ8NCN5 879 aa11.22□□□□□ -0.61
NOD1-201ENST00000222823 OR10G2Q8NGC3 310 aa11.22□□□□□ -0.61
NOD1-201ENST00000222823 RGMAQ96B86 450 aa11.22□□□□□ -0.61
NOD1-201ENST00000222823 TRNT1Q96Q11 434 aaKnown RBP11.22□□□□□ -0.61
NOD1-201ENST00000222823 SLC35A5Q9BS91 424 aa11.22□□□□□ -0.61
NOD1-201ENST00000222823 FBRSL1Q9HCM7 1045 aaKnown RBP11.22□□□□□ -0.61
NOD1-201ENST00000222823 PHF11Q9UIL8 331 aa11.22□□□□□ -0.61
NOD1-201ENST00000222823 CFAP20Q9Y6A4 193 aaKnown RBP11.22□□□□□ -0.61
NOD1-201ENST00000222823 CLDN25C9JDP6 229 aa11.22□□□□□ -0.61
NOD1-201ENST00000222823 FGF18O76093 207 aa11.22□□□□□ -0.61
NOD1-201ENST00000222823 SNX4O95219 450 aa11.22□□□□□ -0.61
NOD1-201ENST00000222823 T-ENOLP0DO92 83 aa11.22□□□□□ -0.61
NOD1-201ENST00000222823 G6PDP11413 515 aa11.22□□□□□ -0.61
NOD1-201ENST00000222823 ZNF8P17098 575 aaPredicted RBP11.22□□□□□ -0.61
NOD1-201ENST00000222823 SDC2P34741 201 aa11.22□□□□□ -0.61
NOD1-201ENST00000222823 MAGEA6P43360 314 aa11.22□□□□□ -0.61
NOD1-201ENST00000222823 PPP2R2BQ00005 443 aa11.22□□□□□ -0.61
NOD1-201ENST00000222823 RING1Q06587 406 aa11.22□□□□□ -0.61
NOD1-201ENST00000222823 IL18Q14116 193 aa11.22□□□□□ -0.61
NOD1-201ENST00000222823 SEMA3AQ14563 771 aa11.22□□□□□ -0.61
NOD1-201ENST00000222823 CRB2Q5IJ48 1285 aa11.22□□□□□ -0.61
NOD1-201ENST00000222823 STEAP4Q687X5 459 aa11.22□□□□□ -0.61
NOD1-201ENST00000222823 FRRS1Q6ZNA5 592 aa11.22□□□□□ -0.61
NOD1-201ENST00000222823 GRASPQ7Z6J2 395 aaPredicted RBP11.22□□□□□ -0.61
NOD1-201ENST00000222823 UMODL1-AS1Q8N2C9 162 aa11.22□□□□□ -0.61
NOD1-201ENST00000222823 OXR1Q8N573 874 aa11.22□□□□□ -0.61
NOD1-201ENST00000222823 NATD1Q8N6N6 113 aa11.22□□□□□ -0.61
NOD1-201ENST00000222823 RAB2BQ8WUD1 216 aa11.22□□□□□ -0.61
NOD1-201ENST00000222823 CAMK1GQ96NX5 476 aa11.22□□□□□ -0.61
NOD1-201ENST00000222823 ETAA1Q9NY74 926 aa11.22□□□□□ -0.61
NOD1-201ENST00000222823 ACTR3BQ9P1U1 418 aa11.22□□□□□ -0.61
NOD1-201ENST00000222823 CKLFQ9UBR5 152 aa11.22□□□□□ -0.61
NOD1-201ENST00000222823 TAC3Q9UHF0 121 aa11.22□□□□□ -0.61
NOD1-201ENST00000222823 SBF2Q86WG5 1849 aa11.22□□□□□ -0.61
NOD1-201ENST00000222823 KLK1P06870 262 aa11.21□□□□□ -0.61
NOD1-201ENST00000222823 FGF3P11487 239 aaPredicted RBP11.21□□□□□ -0.61
NOD1-201ENST00000222823 AZGP1P25311 298 aaKnown RBP11.21□□□□□ -0.61
NOD1-201ENST00000222823 GOLGA7Q7Z5G4 137 aa11.21□□□□□ -0.61
NOD1-201ENST00000222823 THOC6Q86W42 341 aaKnown RBP11.21□□□□□ -0.61
NOD1-201ENST00000222823 TREML1Q86YW5 311 aa11.21□□□□□ -0.61
NOD1-201ENST00000222823 IGSF21Q96ID5 467 aa11.21□□□□□ -0.61
NOD1-201ENST00000222823 TRMT61BQ9BVS5 477 aaKnown RBP11.21□□□□□ -0.61
NOD1-201ENST00000222823 PRRG4Q9BZD6 226 aa11.21□□□□□ -0.61
NOD1-201ENST00000222823 THUMPD1Q9NXG2 353 aaKnown RBP11.21□□□□□ -0.61
NOD1-201ENST00000222823 ING3Q9NXR8 418 aa11.21□□□□□ -0.61
NOD1-201ENST00000222823 EURLQ9NYK6 297 aa11.21□□□□□ -0.61
NOD1-201ENST00000222823 GABRQQ9UN88 632 aa11.21□□□□□ -0.61
NOD1-201ENST00000222823 MAN2B2Q9Y2E5 1009 aa11.21□□□□□ -0.61
NOD1-201ENST00000222823 ARFGEF1Q9Y6D6 1849 aa11.21□□□□□ -0.61
NOD1-201ENST00000222823 SAGE2PA6NJ88 616 aa11.21□□□□□ -0.61
NOD1-201ENST00000222823 M0QX08 132 aa11.21□□□□□ -0.61
NOD1-201ENST00000222823 MMP20O60882 483 aa11.21□□□□□ -0.61
NOD1-201ENST00000222823 PGLSO95336 258 aa11.21□□□□□ -0.61
NOD1-201ENST00000222823 OPN1SWP03999 348 aa11.21□□□□□ -0.61
NOD1-201ENST00000222823 ALDOAP04075 364 aaKnown RBP11.21□□□□□ -0.61
NOD1-201ENST00000222823 EBLN1P0CF75 366 aa11.21□□□□□ -0.61
NOD1-201ENST00000222823 CCL5P13501 91 aa11.21□□□□□ -0.61
NOD1-201ENST00000222823 PIK3CBP42338 1070 aa11.21□□□□□ -0.61
NOD1-201ENST00000222823 GRK6P43250 576 aa11.21□□□□□ -0.61
NOD1-201ENST00000222823 PGDP52209 483 aa11.21□□□□□ -0.61
NOD1-201ENST00000222823 GANABQ14697 944 aaKnown RBP11.21□□□□□ -0.61
NOD1-201ENST00000222823 MYBPC3Q14896 1274 aa11.21□□□□□ -0.61
NOD1-201ENST00000222823 TCEAL5Q5H9L2 206 aa11.21□□□□□ -0.61
NOD1-201ENST00000222823 SPANXN4Q5MJ08 99 aa11.21□□□□□ -0.61
NOD1-201ENST00000222823 OGFOD2Q6N063 350 aa11.21□□□□□ -0.61
NOD1-201ENST00000222823 TMIGD1Q6UXZ0 262 aa11.21□□□□□ -0.61
NOD1-201ENST00000222823 ATCAYQ86WG3 371 aa11.21□□□□□ -0.61
NOD1-201ENST00000222823 NXPE1Q8N323 547 aa11.21□□□□□ -0.61
NOD1-201ENST00000222823 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.21□□□□□ -0.61
NOD1-201ENST00000222823 CMTM7Q96FZ5 175 aa11.21□□□□□ -0.61
NOD1-201ENST00000222823 SLC2A13Q96QE2 648 aa11.21□□□□□ -0.61
NOD1-201ENST00000222823 RBM7Q9Y580 266 aaKnown RBP11.21□□□□□ -0.61
NOD1-201ENST00000222823 MANBAO00462 879 aa11.21□□□□□ -0.62
NOD1-201ENST00000222823 UBXN7O94888 489 aa11.21□□□□□ -0.62
NOD1-201ENST00000222823 RPL10P27635 214 aaKnown RBP11.21□□□□□ -0.62
NOD1-201ENST00000222823 FAUP35544 74 aaKnown RBP11.21□□□□□ -0.62
NOD1-201ENST00000222823 GATMP50440 423 aa11.21□□□□□ -0.62
NOD1-201ENST00000222823 DSTNP60981 165 aa11.21□□□□□ -0.62
NOD1-201ENST00000222823 MADCAM1Q13477 382 aa11.21□□□□□ -0.62
NOD1-201ENST00000222823 UBXN2BQ14CS0 331 aa11.21□□□□□ -0.62
NOD1-201ENST00000222823 MAMDC4Q6UXC1 1216 aa11.21□□□□□ -0.62
NOD1-201ENST00000222823 PRR23BQ6ZRT6 265 aa11.21□□□□□ -0.62
NOD1-201ENST00000222823 MEIOBQ8N635 442 aa11.21□□□□□ -0.62
NOD1-201ENST00000222823 TXNDC5Q8NBS9 432 aaKnown RBP11.21□□□□□ -0.62
NOD1-201ENST00000222823 OR5AK3PQ8NH89 298 aa11.21□□□□□ -0.62
NOD1-201ENST00000222823 IPCEF1Q8WWN9 437 aaPredicted RBP11.21□□□□□ -0.62
NOD1-201ENST00000222823 TOP1MTQ969P6 601 aa11.21□□□□□ -0.62
NOD1-201ENST00000222823 CEP295NLQ96MC4 621 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms