RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 TNPO3Q9Y5L0 923 aaKnown RBP13.26□□□□□ -0.29
GABPB1-201ENST00000220429 GREB1Q4ZG55 1949 aa13.25□□□□□ -0.29
GABPB1-201ENST00000220429 A0A0B4J293 547 aa13.25□□□□□ -0.29
GABPB1-201ENST00000220429 TCRBV5S2A0A599 114 aa13.25□□□□□ -0.29
GABPB1-201ENST00000220429 TMEM189-UBE2V1I3L0A0 370 aa13.25□□□□□ -0.29
GABPB1-201ENST00000220429 RRASP10301 218 aa13.25□□□□□ -0.29
GABPB1-201ENST00000220429 UMPSP11172 480 aa13.25□□□□□ -0.29
GABPB1-201ENST00000220429 POU2F1P14859 743 aa13.25□□□□□ -0.29
GABPB1-201ENST00000220429 ZNF3P17036 446 aa13.25□□□□□ -0.29
GABPB1-201ENST00000220429 ADRA1AP35348 466 aa13.25□□□□□ -0.29
GABPB1-201ENST00000220429 GRM3Q14832 879 aa13.25□□□□□ -0.29
GABPB1-201ENST00000220429 TRIP4Q15650 581 aaPredicted RBP13.25□□□□□ -0.29
GABPB1-201ENST00000220429 ARMCX4Q5H9R4 360 aa13.25□□□□□ -0.29
GABPB1-201ENST00000220429 SULT1C3Q6IMI6 304 aa13.25□□□□□ -0.29
GABPB1-201ENST00000220429 ZNF566Q969W8 418 aa13.25□□□□□ -0.29
GABPB1-201ENST00000220429 RNF31Q96EP0 1072 aa13.25□□□□□ -0.29
GABPB1-201ENST00000220429 HOPXQ9BPY8 73 aaPredicted RBP13.25□□□□□ -0.29
GABPB1-201ENST00000220429 SPOCK3Q9BQ16 436 aa13.25□□□□□ -0.29
GABPB1-201ENST00000220429 TTLL2Q9BWV7 592 aa13.25□□□□□ -0.29
GABPB1-201ENST00000220429 SHARPINQ9H0F6 387 aa13.25□□□□□ -0.29
GABPB1-201ENST00000220429 PPIL3Q9H2H8 161 aaKnown RBP13.25□□□□□ -0.29
GABPB1-201ENST00000220429 NMRAL1Q9HBL8 299 aa13.25□□□□□ -0.29
GABPB1-201ENST00000220429 EXD2Q9NVH0 621 aa13.25□□□□□ -0.29
GABPB1-201ENST00000220429 SPATA6Q9NWH7 488 aaPredicted RBP13.25□□□□□ -0.29
GABPB1-201ENST00000220429 USE1Q9NZ43 259 aa13.25□□□□□ -0.29
GABPB1-201ENST00000220429 SRRDQ9UH36 339 aa13.25□□□□□ -0.29
GABPB1-201ENST00000220429 SCML2Q9UQR0 700 aa13.25□□□□□ -0.29
GABPB1-201ENST00000220429 ACOT9Q9Y305 439 aa13.25□□□□□ -0.29
GABPB1-201ENST00000220429 UBDO15205 165 aa13.25□□□□□ -0.29
GABPB1-201ENST00000220429 GREM1O60565 184 aa13.25□□□□□ -0.29
GABPB1-201ENST00000220429 CABYRO75952 493 aa13.25□□□□□ -0.29
GABPB1-201ENST00000220429 ANXA9O76027 345 aa13.25□□□□□ -0.29
GABPB1-201ENST00000220429 SNAPINO95295 136 aa13.25□□□□□ -0.29
GABPB1-201ENST00000220429 FADS2O95864 444 aaKnown RBP13.25□□□□□ -0.29
GABPB1-201ENST00000220429 HPRP00739 348 aa13.25□□□□□ -0.29
GABPB1-201ENST00000220429 CSRP3P50461 194 aa13.25□□□□□ -0.29
GABPB1-201ENST00000220429 NAGLUP54802 743 aa13.25□□□□□ -0.29
GABPB1-201ENST00000220429 FAM189BP81408 668 aa13.25□□□□□ -0.29
GABPB1-201ENST00000220429 IQCCQ4KMZ1 466 aa13.25□□□□□ -0.29
GABPB1-201ENST00000220429 PCID2Q5JVF3 399 aa13.25□□□□□ -0.29
GABPB1-201ENST00000220429 LIPMQ5VYY2 423 aa13.25□□□□□ -0.29
GABPB1-201ENST00000220429 PKN3Q6P5Z2 889 aa13.25□□□□□ -0.29
GABPB1-201ENST00000220429 SYVN1Q86TM6 617 aa13.25□□□□□ -0.29
GABPB1-201ENST00000220429 MON1AQ86VX9 555 aa13.25□□□□□ -0.29
GABPB1-201ENST00000220429 DCP1BQ8IZD4 617 aaKnown RBP13.25□□□□□ -0.29
GABPB1-201ENST00000220429 C9orf62Q8N4C0 152 aa13.25□□□□□ -0.29
GABPB1-201ENST00000220429 TMBIM1Q969X1 311 aa13.25□□□□□ -0.29
GABPB1-201ENST00000220429 SLC30A2Q9BRI3 323 aa13.25□□□□□ -0.29
GABPB1-201ENST00000220429 ELOVL6Q9H5J4 265 aa13.25□□□□□ -0.29
GABPB1-201ENST00000220429 MRM3Q9HC36 420 aaKnown RBP13.25□□□□□ -0.29
GABPB1-201ENST00000220429 RBM22Q9NW64 420 aaKnown RBP eCLIP13.25□□□□□ -0.29
GABPB1-201ENST00000220429 REV1Q9UBZ9 1251 aa13.25□□□□□ -0.29
GABPB1-201ENST00000220429 TMEM233B4DJY2 109 aa13.24□□□□□ -0.29
GABPB1-201ENST00000220429 SMLR1H3BR10 107 aa13.24□□□□□ -0.29
GABPB1-201ENST00000220429 ECDO95905 644 aaPredicted RBP13.24□□□□□ -0.29
GABPB1-201ENST00000220429 CYBBP04839 570 aa13.24□□□□□ -0.29
GABPB1-201ENST00000220429 CDK1P06493 297 aa13.24□□□□□ -0.29
GABPB1-201ENST00000220429 KCNA5P22460 613 aa13.24□□□□□ -0.29
GABPB1-201ENST00000220429 CAPZA2P47755 286 aa13.24□□□□□ -0.29
GABPB1-201ENST00000220429 PGGT1BP53609 377 aa13.24□□□□□ -0.29
GABPB1-201ENST00000220429 NRG1Q02297 640 aaPredicted RBP13.24□□□□□ -0.29
GABPB1-201ENST00000220429 CDK5R2Q13319 367 aa13.24□□□□□ -0.29
GABPB1-201ENST00000220429 ZNF169Q14929 603 aaPredicted RBP13.24□□□□□ -0.29
GABPB1-201ENST00000220429 PRMT9Q6P2P2 845 aa13.24□□□□□ -0.29
GABPB1-201ENST00000220429 ZC3HC1Q86WB0 502 aaKnown RBP13.24□□□□□ -0.29
GABPB1-201ENST00000220429 RDH10Q8IZV5 341 aa13.24□□□□□ -0.29
GABPB1-201ENST00000220429 VWA5B2Q8N398 1253 aa13.24□□□□□ -0.29
GABPB1-201ENST00000220429 TTC9BQ8N6N2 239 aa13.24□□□□□ -0.29
GABPB1-201ENST00000220429 CNIH3Q8TBE1 160 aa13.24□□□□□ -0.29
GABPB1-201ENST00000220429 FUBP3Q96I24 572 aaKnown RBP eCLIP13.24□□□□□ -0.29
GABPB1-201ENST00000220429 RADILQ96JH8 1075 aa13.24□□□□□ -0.29
GABPB1-201ENST00000220429 ACOX2Q99424 681 aa13.24□□□□□ -0.29
GABPB1-201ENST00000220429 GPR22Q99680 433 aa13.24□□□□□ -0.29
GABPB1-201ENST00000220429 TINAGL1Q9GZM7 467 aaPredicted RBP13.24□□□□□ -0.29
GABPB1-201ENST00000220429 SLC22A4Q9H015 551 aa13.24□□□□□ -0.29
GABPB1-201ENST00000220429 RC3H2Q9HBD1 1191 aaKnown RBP13.24□□□□□ -0.29
GABPB1-201ENST00000220429 CYP4F12Q9HCS2 524 aa13.24□□□□□ -0.29
GABPB1-201ENST00000220429 ACOT13Q9NPJ3 140 aa13.24□□□□□ -0.29
GABPB1-201ENST00000220429 COA4Q9NYJ1 87 aa13.24□□□□□ -0.29
GABPB1-201ENST00000220429 SLC39A10Q9ULF5 831 aa13.24□□□□□ -0.29
GABPB1-201ENST00000220429 SLC12A8A0AV02 714 aa13.24□□□□□ -0.29
GABPB1-201ENST00000220429 UPK1AO00322 258 aa13.24□□□□□ -0.29
GABPB1-201ENST00000220429 PRMT5O14744 637 aaPredicted RBP13.24□□□□□ -0.29
GABPB1-201ENST00000220429 TRIM3O75382 744 aaPredicted RBP13.24□□□□□ -0.29
GABPB1-201ENST00000220429 PMPCBO75439 489 aa13.24□□□□□ -0.29
GABPB1-201ENST00000220429 ANGPTL1O95841 491 aa13.24□□□□□ -0.29
GABPB1-201ENST00000220429 HSMCR30P0CW71 290 aa13.24□□□□□ -0.29
GABPB1-201ENST00000220429 ZP3P21754 424 aa13.24□□□□□ -0.29
GABPB1-201ENST00000220429 RPS3P23396 243 aaKnown RBP eCLIP13.24□□□□□ -0.29
GABPB1-201ENST00000220429 GEMP55040 296 aa13.24□□□□□ -0.29
GABPB1-201ENST00000220429 KCNAB2Q13303 367 aa13.24□□□□□ -0.29
GABPB1-201ENST00000220429 ANGPT1Q15389 498 aa13.24□□□□□ -0.29
GABPB1-201ENST00000220429 HKDC1Q2TB90 917 aa13.24□□□□□ -0.29
GABPB1-201ENST00000220429 TRIM60Q495X7 471 aa13.24□□□□□ -0.29
GABPB1-201ENST00000220429 MPP7Q5T2T1 576 aa13.24□□□□□ -0.29
GABPB1-201ENST00000220429 ESRP1Q6NXG1 681 aaKnown RBP13.24□□□□□ -0.29
GABPB1-201ENST00000220429 MSANTD2Q6P1R3 559 aa13.24□□□□□ -0.29
GABPB1-201ENST00000220429 ZSWIM9Q86XI8 627 aa13.24□□□□□ -0.29
GABPB1-201ENST00000220429 ARL6IP6Q8N6S5 226 aa13.24□□□□□ -0.29
GABPB1-201ENST00000220429 TET1Q8NFU7 2136 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms