RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 MNTQ99583 582 aa13.27□□□□□ -0.28
TGFBR3-201ENST00000212355 ZCCHC3Q9NUD5 404 aaKnown RBP13.27□□□□□ -0.28
TGFBR3-201ENST00000212355 FAM72CH0Y354 149 aa13.27□□□□□ -0.29
TGFBR3-201ENST00000212355 CLDN4O14493 209 aa13.27□□□□□ -0.29
TGFBR3-201ENST00000212355 KHKP50053 298 aa13.27□□□□□ -0.29
TGFBR3-201ENST00000212355 MMP14P50281 582 aa13.27□□□□□ -0.29
TGFBR3-201ENST00000212355 PCLAFQ15004 111 aa13.27□□□□□ -0.29
TGFBR3-201ENST00000212355 ASTE1Q2TB18 679 aaPredicted RBP13.27□□□□□ -0.29
TGFBR3-201ENST00000212355 FAM72AQ5TYM5 149 aa13.27□□□□□ -0.29
TGFBR3-201ENST00000212355 FAM72DQ6L9T8 149 aa13.27□□□□□ -0.29
TGFBR3-201ENST00000212355 FAM72BQ86X60 149 aa13.27□□□□□ -0.29
TGFBR3-201ENST00000212355 PXYLP1Q8TE99 480 aa13.27□□□□□ -0.29
TGFBR3-201ENST00000212355 TM9SF2Q99805 663 aa13.27□□□□□ -0.29
TGFBR3-201ENST00000212355 IGSF9Q9P2J2 1179 aa13.27□□□□□ -0.29
TGFBR3-201ENST00000212355 ZNF860A6NHJ4 632 aa13.27□□□□□ -0.29
TGFBR3-201ENST00000212355 NFATC1O95644 943 aa13.27□□□□□ -0.29
TGFBR3-201ENST00000212355 C8GP07360 202 aa13.27□□□□□ -0.29
TGFBR3-201ENST00000212355 ACTR1BP42025 376 aa13.27□□□□□ -0.29
TGFBR3-201ENST00000212355 ACTR1AP61163 376 aa13.27□□□□□ -0.29
TGFBR3-201ENST00000212355 FAM110CQ1W6H9 321 aa13.27□□□□□ -0.29
TGFBR3-201ENST00000212355 WSCD2Q2TBF2 565 aa13.27□□□□□ -0.29
TGFBR3-201ENST00000212355 C18orf21Q32NC0 220 aaPredicted RBP13.27□□□□□ -0.29
TGFBR3-201ENST00000212355 CARD16Q5EG05 197 aa13.27□□□□□ -0.29
TGFBR3-201ENST00000212355 TMED4Q7Z7H5 227 aa13.27□□□□□ -0.29
TGFBR3-201ENST00000212355 TDRPQ86YL5 185 aa13.27□□□□□ -0.29
TGFBR3-201ENST00000212355 DPYSL5Q9BPU6 564 aa13.27□□□□□ -0.29
TGFBR3-201ENST00000212355 NANSQ9NR45 359 aa13.27□□□□□ -0.29
TGFBR3-201ENST00000212355 PCDHGB3Q9Y5G1 929 aa13.27□□□□□ -0.29
TGFBR3-201ENST00000212355 BLOC1S5-TXNDC5H3BN57 136 aa13.27□□□□□ -0.29
TGFBR3-201ENST00000212355 PTPN2P17706 415 aa13.27□□□□□ -0.29
TGFBR3-201ENST00000212355 GRPRP30550 384 aa13.27□□□□□ -0.29
TGFBR3-201ENST00000212355 BNC1Q01954 994 aa13.27□□□□□ -0.29
TGFBR3-201ENST00000212355 PTP4A2Q12974 167 aa13.27□□□□□ -0.29
TGFBR3-201ENST00000212355 C14orf80Q86SX3 495 aa13.27□□□□□ -0.29
TGFBR3-201ENST00000212355 THOC6Q86W42 341 aaKnown RBP13.27□□□□□ -0.29
TGFBR3-201ENST00000212355 EFHD2Q96C19 240 aaPredicted RBP13.27□□□□□ -0.29
TGFBR3-201ENST00000212355 PRR11Q96HE9 360 aaPredicted RBP13.27□□□□□ -0.29
TGFBR3-201ENST00000212355 CDKN2AIPNLQ96HQ2 116 aa13.27□□□□□ -0.29
TGFBR3-201ENST00000212355 MGME1Q9BQP7 344 aa13.27□□□□□ -0.29
TGFBR3-201ENST00000212355 TLR6Q9Y2C9 796 aa13.27□□□□□ -0.29
TGFBR3-201ENST00000212355 HOXD13P35453 343 aa13.26□□□□□ -0.29
TGFBR3-201ENST00000212355 S100A10P60903 97 aa13.26□□□□□ -0.29
TGFBR3-201ENST00000212355 ERVK-8P63133 956 aa13.26□□□□□ -0.29
TGFBR3-201ENST00000212355 PDGFRLQ15198 375 aa13.26□□□□□ -0.29
TGFBR3-201ENST00000212355 ATAT1Q5SQI0 421 aa13.26□□□□□ -0.29
TGFBR3-201ENST00000212355 LRRC66Q68CR7 880 aa13.26□□□□□ -0.29
TGFBR3-201ENST00000212355 ANO7Q6IWH7 933 aa13.26□□□□□ -0.29
TGFBR3-201ENST00000212355 GDPD4Q6W3E5 623 aa13.26□□□□□ -0.29
TGFBR3-201ENST00000212355 TAPBPLQ9BX59 468 aa13.26□□□□□ -0.29
TGFBR3-201ENST00000212355 TRPS1Q9UHF7 1281 aa13.26□□□□□ -0.29
TGFBR3-201ENST00000212355 MRTO4Q9UKD2 239 aaKnown RBP13.26□□□□□ -0.29
TGFBR3-201ENST00000212355 RWDD3Q9Y3V2 267 aa13.26□□□□□ -0.29
TGFBR3-201ENST00000212355 FXYD6-FXYD2A0A087WZ82 144 aa13.26□□□□□ -0.29
TGFBR3-201ENST00000212355 ELOA3DA6NLF2 546 aaPredicted RBP13.26□□□□□ -0.29
TGFBR3-201ENST00000212355 ARVCFO00192 962 aa13.26□□□□□ -0.29
TGFBR3-201ENST00000212355 ACOX3O15254 700 aa13.26□□□□□ -0.29
TGFBR3-201ENST00000212355 TLX2O43763 284 aaPredicted RBP13.26□□□□□ -0.29
TGFBR3-201ENST00000212355 ECHS1P30084 290 aa13.26□□□□□ -0.29
TGFBR3-201ENST00000212355 CYP1B1Q16678 543 aa13.26□□□□□ -0.29
TGFBR3-201ENST00000212355 ELOA3BQ3SY89 546 aa13.26□□□□□ -0.29
TGFBR3-201ENST00000212355 RBM48Q5RL73 367 aaKnown RBP13.26□□□□□ -0.29
TGFBR3-201ENST00000212355 ELOA3Q8NG57 546 aa13.26□□□□□ -0.29
TGFBR3-201ENST00000212355 ADAD1Q96M93 576 aaKnown RBP13.26□□□□□ -0.29
TGFBR3-201ENST00000212355 FCRL3Q96P31 734 aaPredicted RBP13.26□□□□□ -0.29
TGFBR3-201ENST00000212355 LRRC3Q9BY71 257 aa13.26□□□□□ -0.29
TGFBR3-201ENST00000212355 FXYD6Q9H0Q3 95 aa13.26□□□□□ -0.29
TGFBR3-201ENST00000212355 RBPJLQ9UBG7 517 aa13.26□□□□□ -0.29
TGFBR3-201ENST00000212355 COPS7AQ9UBW8 275 aa13.26□□□□□ -0.29
TGFBR3-201ENST00000212355 C13orf42A0A1B0GVH6 325 aa13.26□□□□□ -0.29
TGFBR3-201ENST00000212355 ESR1P03372 595 aa13.26□□□□□ -0.29
TGFBR3-201ENST00000212355 CDH1P12830 882 aa13.26□□□□□ -0.29
TGFBR3-201ENST00000212355 TAS2R50P59544 299 aa13.26□□□□□ -0.29
TGFBR3-201ENST00000212355 DSTNP60981 165 aa13.26□□□□□ -0.29
TGFBR3-201ENST00000212355 SUN5Q8TC36 379 aa13.26□□□□□ -0.29
TGFBR3-201ENST00000212355 MSLNLQ96KJ4 702 aa13.26□□□□□ -0.29
TGFBR3-201ENST00000212355 VPS29Q9UBQ0 182 aa13.26□□□□□ -0.29
TGFBR3-201ENST00000212355 MYH7P12883 1935 aa13.26□□□□□ -0.29
TGFBR3-201ENST00000212355 PITPNM1O00562 1244 aa13.26□□□□□ -0.29
TGFBR3-201ENST00000212355 KERAO60938 352 aa13.26□□□□□ -0.29
TGFBR3-201ENST00000212355 ATP6V1G1O75348 118 aa13.26□□□□□ -0.29
TGFBR3-201ENST00000212355 GDI2P50395 445 aaKnown RBP13.26□□□□□ -0.29
TGFBR3-201ENST00000212355 DAG1Q14118 895 aa13.26□□□□□ -0.29
TGFBR3-201ENST00000212355 NNATQ16517 81 aa13.26□□□□□ -0.29
TGFBR3-201ENST00000212355 XKR4Q5GH76 650 aa13.26□□□□□ -0.29
TGFBR3-201ENST00000212355 RNF130Q86XS8 419 aa13.26□□□□□ -0.29
TGFBR3-201ENST00000212355 CMTR2Q8IYT2 770 aaKnown RBP13.26□□□□□ -0.29
TGFBR3-201ENST00000212355 OR2AJ1Q8NGZ0 328 aa13.26□□□□□ -0.29
TGFBR3-201ENST00000212355 PLD4Q96BZ4 506 aa13.26□□□□□ -0.29
TGFBR3-201ENST00000212355 SH3YL1Q96HL8 342 aaPredicted RBP13.26□□□□□ -0.29
TGFBR3-201ENST00000212355 GDAP2Q9NXN4 497 aa13.26□□□□□ -0.29
TGFBR3-201ENST00000212355 MTRRQ9UBK8 725 aa13.26□□□□□ -0.29
TGFBR3-201ENST00000212355 MAU2Q9Y6X3 613 aa13.26□□□□□ -0.29
TGFBR3-201ENST00000212355 TRBC2A0A5B9 178 aa13.26□□□□□ -0.29
TGFBR3-201ENST00000212355 IRAK2O43187 625 aa13.26□□□□□ -0.29
TGFBR3-201ENST00000212355 GNAZP19086 355 aa13.26□□□□□ -0.29
TGFBR3-201ENST00000212355 NDUFA9Q16795 377 aa13.26□□□□□ -0.29
TGFBR3-201ENST00000212355 HYAL4Q2M3T9 481 aa13.26□□□□□ -0.29
TGFBR3-201ENST00000212355 SPANXN4Q5MJ08 99 aa13.26□□□□□ -0.29
TGFBR3-201ENST00000212355 PRAMEF17Q5VTA0 474 aa13.26□□□□□ -0.29
TGFBR3-201ENST00000212355 ADNP2Q6IQ32 1131 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms