RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 HOXD1Q9GZZ0 328 aa16.28■□□□□ 0.2
CTDP1-201ENST00000075430 TLR6Q9Y2C9 796 aa16.28■□□□□ 0.2
CTDP1-201ENST00000075430 ARID1BQ8NFD5 2236 aaPredicted RBP16.27■□□□□ 0.2
CTDP1-201ENST00000075430 AGAP5A6NIR3 686 aa16.27■□□□□ 0.2
CTDP1-201ENST00000075430 TMEM88BA6NKF7 163 aa16.27■□□□□ 0.2
CTDP1-201ENST00000075430 CENPXA8MT69 81 aa16.27■□□□□ 0.2
CTDP1-201ENST00000075430 ANKRD66B4E2M5 251 aa16.27■□□□□ 0.2
CTDP1-201ENST00000075430 HOXD11P31277 338 aaPredicted RBP16.27■□□□□ 0.2
CTDP1-201ENST00000075430 SGSHP51688 502 aa16.27■□□□□ 0.2
CTDP1-201ENST00000075430 ZNF551Q7Z340 670 aaPredicted RBP16.27■□□□□ 0.2
CTDP1-201ENST00000075430 SZRD1Q7Z422 152 aa16.27■□□□□ 0.2
CTDP1-201ENST00000075430 DPP10Q8N608 796 aa16.27■□□□□ 0.2
CTDP1-201ENST00000075430 OR5M11Q96RB7 305 aa16.27■□□□□ 0.2
CTDP1-201ENST00000075430 FAM126AQ9BYI3 521 aaPredicted RBP16.27■□□□□ 0.2
CTDP1-201ENST00000075430 NECTIN3Q9NQS3 549 aa16.27■□□□□ 0.2
CTDP1-201ENST00000075430 NLE1Q9NVX2 485 aaPredicted RBP16.27■□□□□ 0.2
CTDP1-201ENST00000075430 TMEM248Q9NWD8 314 aa16.27■□□□□ 0.2
CTDP1-201ENST00000075430 MEN1O00255 615 aa16.27■□□□□ 0.2
CTDP1-201ENST00000075430 SAP18O00422 153 aaKnown RBP16.27■□□□□ 0.2
CTDP1-201ENST00000075430 DYRK3O43781 588 aa16.27■□□□□ 0.2
CTDP1-201ENST00000075430 SNX4O95219 450 aa16.27■□□□□ 0.2
CTDP1-201ENST00000075430 CYP4F8P98187 520 aa16.27■□□□□ 0.2
CTDP1-201ENST00000075430 KCNC4Q03721 635 aa16.27■□□□□ 0.2
CTDP1-201ENST00000075430 ZNF605Q86T29 641 aa16.27■□□□□ 0.2
CTDP1-201ENST00000075430 OR9Q2Q8NGE9 314 aa16.27■□□□□ 0.2
CTDP1-201ENST00000075430 OR8J3Q8NGG0 315 aa16.27■□□□□ 0.2
CTDP1-201ENST00000075430 OR5AK3PQ8NH89 298 aa16.27■□□□□ 0.2
CTDP1-201ENST00000075430 SH3KBP1Q96B97 665 aa16.27■□□□□ 0.2
CTDP1-201ENST00000075430 EMILIN2Q9BXX0 1053 aa16.27■□□□□ 0.2
CTDP1-201ENST00000075430 CD84Q9UIB8 345 aa16.27■□□□□ 0.2
CTDP1-201ENST00000075430 WBP11Q9Y2W2 641 aaKnown RBP16.27■□□□□ 0.2
CTDP1-201ENST00000075430 PRKAB1Q9Y478 270 aa16.27■□□□□ 0.2
CTDP1-201ENST00000075430 GFRA2O00451 464 aa16.27■□□□□ 0.19
CTDP1-201ENST00000075430 STX16O14662 325 aa16.27■□□□□ 0.19
CTDP1-201ENST00000075430 KIAA0513O60268 411 aa16.27■□□□□ 0.19
CTDP1-201ENST00000075430 WDR47O94967 919 aa16.27■□□□□ 0.19
CTDP1-201ENST00000075430 SOX14O95416 240 aa16.27■□□□□ 0.19
CTDP1-201ENST00000075430 SPOUT1Q5T280 376 aaKnown RBP16.27■□□□□ 0.19
CTDP1-201ENST00000075430 KIAA1614Q5VZ46 1190 aa16.27■□□□□ 0.19
CTDP1-201ENST00000075430 FAM171BQ6P995 826 aa16.27■□□□□ 0.19
CTDP1-201ENST00000075430 CYP4Z2PQ8N1L4 340 aa16.27■□□□□ 0.19
CTDP1-201ENST00000075430 ZNF675Q8TD23 568 aa16.27■□□□□ 0.19
CTDP1-201ENST00000075430 FOXJ1Q92949 421 aa16.27■□□□□ 0.19
CTDP1-201ENST00000075430 SLC38A4Q969I6 547 aa16.27■□□□□ 0.19
CTDP1-201ENST00000075430 FYTTD1Q96QD9 318 aaKnown RBP16.27■□□□□ 0.19
CTDP1-201ENST00000075430 ZIC5Q96T25 663 aa16.27■□□□□ 0.19
CTDP1-201ENST00000075430 HAS3O00219 553 aa16.26■□□□□ 0.19
CTDP1-201ENST00000075430 ANKRD28O15084 1053 aa16.26■□□□□ 0.19
CTDP1-201ENST00000075430 CPNE3O75131 537 aaKnown RBP16.26■□□□□ 0.19
CTDP1-201ENST00000075430 DUSP11O75319 330 aaKnown RBP16.26■□□□□ 0.19
CTDP1-201ENST00000075430 IGLV3-25P01717 112 aa16.26■□□□□ 0.19
CTDP1-201ENST00000075430 SDHBP21912 280 aa16.26■□□□□ 0.19
CTDP1-201ENST00000075430 SLC6A4P31645 630 aa16.26■□□□□ 0.19
CTDP1-201ENST00000075430 RGS4P49798 205 aa16.26■□□□□ 0.19
CTDP1-201ENST00000075430 RHOAP61586 193 aa16.26■□□□□ 0.19
CTDP1-201ENST00000075430 TBRG1Q3YBR2 411 aa16.26■□□□□ 0.19
CTDP1-201ENST00000075430 MORN1Q5T089 497 aa16.26■□□□□ 0.19
CTDP1-201ENST00000075430 NADSYN1Q6IA69 706 aa16.26■□□□□ 0.19
CTDP1-201ENST00000075430 BCDIN3DQ7Z5W3 292 aaKnown RBP16.26■□□□□ 0.19
CTDP1-201ENST00000075430 TSPEARQ8WU66 669 aa16.26■□□□□ 0.19
CTDP1-201ENST00000075430 NELL1Q92832 810 aa16.26■□□□□ 0.19
CTDP1-201ENST00000075430 YIPF6Q96EC8 236 aa16.26■□□□□ 0.19
CTDP1-201ENST00000075430 GORASP2Q9H8Y8 452 aa16.26■□□□□ 0.19
CTDP1-201ENST00000075430 TMEM184CQ9NVA4 438 aa16.26■□□□□ 0.19
CTDP1-201ENST00000075430 PCDHGB6Q9Y5F9 930 aa16.26■□□□□ 0.19
CTDP1-201ENST00000075430 CNTRLQ7Z7A1 2325 aa16.26■□□□□ 0.19
CTDP1-201ENST00000075430 CCDC88CQ9P219 2028 aa16.26■□□□□ 0.19
CTDP1-201ENST00000075430 J3KTA2 159 aa16.26■□□□□ 0.19
CTDP1-201ENST00000075430 TAPBPO15533 448 aa16.26■□□□□ 0.19
CTDP1-201ENST00000075430 PRAMEF11O60813 436 aa16.26■□□□□ 0.19
CTDP1-201ENST00000075430 GJB5O95377 273 aa16.26■□□□□ 0.19
CTDP1-201ENST00000075430 CCND3P30281 292 aaPredicted RBP16.26■□□□□ 0.19
CTDP1-201ENST00000075430 SPIBQ01892 262 aa16.26■□□□□ 0.19
CTDP1-201ENST00000075430 PLEKHG6Q3KR16 790 aa16.26■□□□□ 0.19
CTDP1-201ENST00000075430 XKR4Q5GH76 650 aa16.26■□□□□ 0.19
CTDP1-201ENST00000075430 PPP2R2DQ66LE6 453 aa16.26■□□□□ 0.19
CTDP1-201ENST00000075430 LIMS2Q7Z4I7 341 aa16.26■□□□□ 0.19
CTDP1-201ENST00000075430 ADAMTSL2Q86TH1 951 aa16.26■□□□□ 0.19
CTDP1-201ENST00000075430 MMAAQ8IVH4 418 aaKnown RBP16.26■□□□□ 0.19
CTDP1-201ENST00000075430 GALNT12Q8IXK2 581 aa16.26■□□□□ 0.19
CTDP1-201ENST00000075430 ENTHD1Q8IYW4 607 aa16.26■□□□□ 0.19
CTDP1-201ENST00000075430 CADM2Q8N3J6 435 aa16.26■□□□□ 0.19
CTDP1-201ENST00000075430 WDR36Q8NI36 951 aaKnown RBP16.26■□□□□ 0.19
CTDP1-201ENST00000075430 C11orf16Q9NQ32 467 aa16.26■□□□□ 0.19
CTDP1-201ENST00000075430 NUFIP1Q9UHK0 495 aaKnown RBP16.26■□□□□ 0.19
CTDP1-201ENST00000075430 SLC22A14Q9Y267 594 aa16.26■□□□□ 0.19
CTDP1-201ENST00000075430 EFCAB10A6NFE3 127 aa16.25■□□□□ 0.19
CTDP1-201ENST00000075430 TPST2O60704 377 aa16.25■□□□□ 0.19
CTDP1-201ENST00000075430 CLDN7O95471 211 aa16.25■□□□□ 0.19
CTDP1-201ENST00000075430 HPRP00739 348 aa16.25■□□□□ 0.19
CTDP1-201ENST00000075430 ZNF140P52738 457 aaPredicted RBP16.25■□□□□ 0.19
CTDP1-201ENST00000075430 GABARAPL2P60520 117 aa16.25■□□□□ 0.19
CTDP1-201ENST00000075430 SBSNQ6UWP8 590 aa16.25■□□□□ 0.19
CTDP1-201ENST00000075430 TRIB2Q92519 343 aa16.25■□□□□ 0.19
CTDP1-201ENST00000075430 MED8Q96G25 268 aa16.25■□□□□ 0.19
CTDP1-201ENST00000075430 VMP1Q96GC9 406 aa16.25■□□□□ 0.19
CTDP1-201ENST00000075430 GFM1Q96RP9 751 aaKnown RBP16.25■□□□□ 0.19
CTDP1-201ENST00000075430 ACPTQ9BZG2 426 aa16.25■□□□□ 0.19
CTDP1-201ENST00000075430 HEBP1Q9NRV9 189 aa16.25■□□□□ 0.19
CTDP1-201ENST00000075430 TMEM98Q9Y2Y6 226 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms