RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 CCNIQ14094 377 aa15.91■□□□□ 0.14
PHGDH-216ENST00000641375 CWF19L1Q69YN2 538 aaKnown RBP15.91■□□□□ 0.14
PHGDH-216ENST00000641375 SLC30A9Q6PML9 568 aa15.91■□□□□ 0.14
PHGDH-216ENST00000641375 SLCO4C1Q6ZQN7 724 aa15.91■□□□□ 0.14
PHGDH-216ENST00000641375 TBC1D21Q8IYX1 336 aa15.91■□□□□ 0.14
PHGDH-216ENST00000641375 LIX1Q8N485 282 aa15.91■□□□□ 0.14
PHGDH-216ENST00000641375 SLC26A7Q8TE54 656 aa15.91■□□□□ 0.14
PHGDH-216ENST00000641375 HLA-CQ95604 372 aa15.91■□□□□ 0.14
PHGDH-216ENST00000641375 LRRC58Q96CX6 371 aa15.91■□□□□ 0.14
PHGDH-216ENST00000641375 ASB9Q96DX5 294 aa15.91■□□□□ 0.14
PHGDH-216ENST00000641375 METTL2AQ96IZ6 378 aaKnown RBP15.91■□□□□ 0.14
PHGDH-216ENST00000641375 EFCAB11Q9BUY7 163 aa15.91■□□□□ 0.14
PHGDH-216ENST00000641375 DPY30Q9C005 99 aa15.91■□□□□ 0.14
PHGDH-216ENST00000641375 SGK2Q9HBY8 427 aa15.91■□□□□ 0.14
PHGDH-216ENST00000641375 POLMQ9NP87 494 aaPredicted RBP15.91■□□□□ 0.14
PHGDH-216ENST00000641375 ANGPTL2Q9UKU9 493 aa15.91■□□□□ 0.14
PHGDH-216ENST00000641375 NDRG2Q9UN36 371 aaKnown RBP15.91■□□□□ 0.14
PHGDH-216ENST00000641375 FPGTO14772 594 aa15.9■□□□□ 0.14
PHGDH-216ENST00000641375 FUCA1P04066 466 aa15.9■□□□□ 0.14
PHGDH-216ENST00000641375 XRCC1P18887 633 aaPredicted RBP15.9■□□□□ 0.14
PHGDH-216ENST00000641375 VARSP26640 1264 aaKnown RBP15.9■□□□□ 0.14
PHGDH-216ENST00000641375 ACSL1P33121 698 aa15.9■□□□□ 0.14
PHGDH-216ENST00000641375 CLCNKAP51800 687 aa15.9■□□□□ 0.14
PHGDH-216ENST00000641375 KIAA1024LP59773 190 aa15.9■□□□□ 0.14
PHGDH-216ENST00000641375 TSTA3Q13630 321 aaPredicted RBP15.9■□□□□ 0.14
PHGDH-216ENST00000641375 NFYCQ13952 458 aa15.9■□□□□ 0.14
PHGDH-216ENST00000641375 PTGR1Q14914 329 aa15.9■□□□□ 0.14
PHGDH-216ENST00000641375 SPATS1Q496A3 300 aa15.9■□□□□ 0.14
PHGDH-216ENST00000641375 TIGD2Q4W5G0 525 aa15.9■□□□□ 0.14
PHGDH-216ENST00000641375 USP39Q53GS9 565 aaKnown RBP15.9■□□□□ 0.14
PHGDH-216ENST00000641375 PYCR3Q53H96 274 aa15.9■□□□□ 0.14
PHGDH-216ENST00000641375 PAGE2BQ5JRK9 111 aa15.9■□□□□ 0.14
PHGDH-216ENST00000641375 ATG9BQ674R7 924 aa15.9■□□□□ 0.14
PHGDH-216ENST00000641375 TMPRSS11BQ86T26 416 aa15.9■□□□□ 0.14
PHGDH-216ENST00000641375 RNF148Q8N7C7 305 aa15.9■□□□□ 0.14
PHGDH-216ENST00000641375 PHC3Q8NDX5 983 aa15.9■□□□□ 0.14
PHGDH-216ENST00000641375 WDR34Q96EX3 536 aa15.9■□□□□ 0.14
PHGDH-216ENST00000641375 SCARF2Q96GP6 870 aaPredicted RBP15.9■□□□□ 0.14
PHGDH-216ENST00000641375 ABCD2Q9UBJ2 740 aa15.9■□□□□ 0.14
PHGDH-216ENST00000641375 COLQQ9Y215 455 aaPredicted RBP15.9■□□□□ 0.14
PHGDH-216ENST00000641375 TDRKHQ9Y2W6 561 aaKnown RBP15.9■□□□□ 0.14
PHGDH-216ENST00000641375 PCM1Q15154 2024 aa15.9■□□□□ 0.14
PHGDH-216ENST00000641375 ERGP11308 486 aa15.9■□□□□ 0.14
PHGDH-216ENST00000641375 BCKDHAP12694 445 aa15.9■□□□□ 0.14
PHGDH-216ENST00000641375 RPL10P27635 214 aaKnown RBP15.9■□□□□ 0.14
PHGDH-216ENST00000641375 TRIM25Q14258 630 aaKnown RBP15.9■□□□□ 0.14
PHGDH-216ENST00000641375 TLR1Q15399 786 aa15.9■□□□□ 0.14
PHGDH-216ENST00000641375 THEMIS2Q5TEJ8 643 aa15.9■□□□□ 0.14
PHGDH-216ENST00000641375 MED27Q6P2C8 311 aa15.9■□□□□ 0.14
PHGDH-216ENST00000641375 ZNF852Q6ZMS4 543 aa15.9■□□□□ 0.14
PHGDH-216ENST00000641375 PRR23BQ6ZRT6 265 aa15.9■□□□□ 0.14
PHGDH-216ENST00000641375 RAB42Q8N4Z0 105 aa15.9■□□□□ 0.14
PHGDH-216ENST00000641375 DPP10Q8N608 796 aa15.9■□□□□ 0.14
PHGDH-216ENST00000641375 HAUS8Q9BT25 410 aa15.9■□□□□ 0.14
PHGDH-216ENST00000641375 OSGEPL1Q9H4B0 414 aa15.9■□□□□ 0.14
PHGDH-216ENST00000641375 IL1RL2Q9HB29 575 aa15.9■□□□□ 0.14
PHGDH-216ENST00000641375 S100A14Q9HCY8 104 aa15.9■□□□□ 0.14
PHGDH-216ENST00000641375 SPATA6Q9NWH7 488 aaPredicted RBP15.9■□□□□ 0.14
PHGDH-216ENST00000641375 VPS29Q9UBQ0 182 aa15.9■□□□□ 0.14
PHGDH-216ENST00000641375 CD300AQ9UGN4 299 aa15.9■□□□□ 0.14
PHGDH-216ENST00000641375 MOSPD1Q9UJG1 213 aa15.9■□□□□ 0.14
PHGDH-216ENST00000641375 ASPDHA6ND91 283 aa15.89■□□□□ 0.13
PHGDH-216ENST00000641375 BCAS2O75934 225 aaPredicted RBP15.89■□□□□ 0.13
PHGDH-216ENST00000641375 IL6P05231 212 aa15.89■□□□□ 0.13
PHGDH-216ENST00000641375 HNRNPA2B1P22626 353 aaKnown RBP15.89■□□□□ 0.13
PHGDH-216ENST00000641375 PTDSS1P48651 473 aaKnown RBP15.89■□□□□ 0.13
PHGDH-216ENST00000641375 SLC7A2P52569 658 aa15.89■□□□□ 0.13
PHGDH-216ENST00000641375 ROR2Q01974 943 aaKnown RBP15.89■□□□□ 0.13
PHGDH-216ENST00000641375 LAPTM5Q13571 262 aa15.89■□□□□ 0.13
PHGDH-216ENST00000641375 MLF2Q15773 248 aaPredicted RBP15.89■□□□□ 0.13
PHGDH-216ENST00000641375 LCTLQ6UWM7 567 aa15.89■□□□□ 0.13
PHGDH-216ENST00000641375 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.89■□□□□ 0.135e-6■■■■■ 81.8
PHGDH-216ENST00000641375 HMGB4Q8WW32 186 aa15.89■□□□□ 0.13
PHGDH-216ENST00000641375 SLC5A11Q8WWX8 675 aa15.89■□□□□ 0.13
PHGDH-216ENST00000641375 SLC45A3Q96JT2 553 aa15.89■□□□□ 0.13
PHGDH-216ENST00000641375 MYOCQ99972 504 aa15.89■□□□□ 0.13
PHGDH-216ENST00000641375 SLC39A3Q9BRY0 314 aa15.89■□□□□ 0.13
PHGDH-216ENST00000641375 SPATA7Q9P0W8 599 aa15.89■□□□□ 0.13
PHGDH-216ENST00000641375 FXYD1O00168 92 aa15.89■□□□□ 0.13
PHGDH-216ENST00000641375 C1GALT1C1LP0DN25 315 aa15.89■□□□□ 0.13
PHGDH-216ENST00000641375 AMD1P17707 334 aa15.89■□□□□ 0.13
PHGDH-216ENST00000641375 IDSP22304 550 aa15.89■□□□□ 0.13
PHGDH-216ENST00000641375 ERFP50548 548 aa15.89■□□□□ 0.13
PHGDH-216ENST00000641375 DGKEP52429 567 aa15.89■□□□□ 0.13
PHGDH-216ENST00000641375 TRAP1Q12931 704 aaKnown RBP15.89■□□□□ 0.13
PHGDH-216ENST00000641375 HIST2H2ACQ16777 129 aaPredicted RBP15.89■□□□□ 0.13
PHGDH-216ENST00000641375 PAGE3Q5JUK9 113 aa15.89■□□□□ 0.13
PHGDH-216ENST00000641375 PRAMEF14Q5SWL7 426 aa15.89■□□□□ 0.13
PHGDH-216ENST00000641375 PRAMEF13Q5VWM6 474 aa15.89■□□□□ 0.13
PHGDH-216ENST00000641375 HIST2H2AA3Q6FI13 130 aa15.89■□□□□ 0.13
PHGDH-216ENST00000641375 SUSD1Q6UWL2 747 aa15.89■□□□□ 0.13
PHGDH-216ENST00000641375 OR7G3Q8NG95 312 aa15.89■□□□□ 0.13
PHGDH-216ENST00000641375 ZFAND2BQ8WV99 257 aa15.89■□□□□ 0.13
PHGDH-216ENST00000641375 MTERF1Q99551 399 aaKnown RBP15.89■□□□□ 0.13
PHGDH-216ENST00000641375 PCBD2Q9H0N5 130 aa15.89■□□□□ 0.13
PHGDH-216ENST00000641375 CLMPQ9H6B4 373 aa15.89■□□□□ 0.13
PHGDH-216ENST00000641375 CD93Q9NPY3 652 aa15.89■□□□□ 0.13
PHGDH-216ENST00000641375 GPSM3Q9Y4H4 160 aa15.89■□□□□ 0.13
PHGDH-216ENST00000641375 CFAP20Q9Y6A4 193 aaKnown RBP15.89■□□□□ 0.13
PHGDH-216ENST00000641375 C15orf38-AP3S2A0A0A6YYH1 394 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms