RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 C17orf102A2RUQ5 167 aa8.08□□□□□ -1.12
NECAP1-227ENST00000640648 GABARAPO95166 117 aa8.08□□□□□ -1.12
NECAP1-227ENST00000640648 DHRS4L1P0CG22 281 aa8.08□□□□□ -1.12
NECAP1-227ENST00000640648 CKMT2P17540 419 aa8.08□□□□□ -1.12
NECAP1-227ENST00000640648 ATXN1P54253 815 aaKnown RBP8.08□□□□□ -1.12
NECAP1-227ENST00000640648 GDF10P55107 478 aa8.08□□□□□ -1.12
NECAP1-227ENST00000640648 MLLT6P55198 1093 aaPredicted RBP8.08□□□□□ -1.12
NECAP1-227ENST00000640648 KEAP1Q14145 624 aa8.08□□□□□ -1.12
NECAP1-227ENST00000640648 PFKFB4Q16877 469 aa8.08□□□□□ -1.12
NECAP1-227ENST00000640648 TOR1AIP1Q5JTV8 583 aa8.08□□□□□ -1.12
NECAP1-227ENST00000640648 AKR1C8PQ5T2L2 129 aa8.08□□□□□ -1.12
NECAP1-227ENST00000640648 PPP1R26Q5T8A7 1209 aaPredicted RBP8.08□□□□□ -1.12
NECAP1-227ENST00000640648 METTL11BQ5VVY1 283 aa8.08□□□□□ -1.12
NECAP1-227ENST00000640648 ZNF613Q6PF04 617 aa8.08□□□□□ -1.12
NECAP1-227ENST00000640648 SCIMPQ6UWF3 145 aa8.08□□□□□ -1.12
NECAP1-227ENST00000640648 C1orf52Q8N6N3 182 aaKnown RBP8.08□□□□□ -1.12
NECAP1-227ENST00000640648 SPPL2AQ8TCT8 520 aa8.08□□□□□ -1.12
NECAP1-227ENST00000640648 PIH1D2Q8WWB5 315 aa8.08□□□□□ -1.12
NECAP1-227ENST00000640648 WNT8BQ93098 351 aa8.08□□□□□ -1.12
NECAP1-227ENST00000640648 MUL1Q969V5 352 aa8.08□□□□□ -1.12
NECAP1-227ENST00000640648 PBDC1Q9BVG4 233 aa8.08□□□□□ -1.12
NECAP1-227ENST00000640648 SEMA4BQ9NPR2 832 aaPredicted RBP8.08□□□□□ -1.12
NECAP1-227ENST00000640648 ERVK-18Q9QC07 812 aa8.08□□□□□ -1.12
NECAP1-227ENST00000640648 PCDHA2Q9Y5H9 948 aa8.08□□□□□ -1.12
NECAP1-227ENST00000640648 U3KQV3 271 aa8.08□□□□□ -1.12
NECAP1-227ENST00000640648 CBX4O00257 560 aa8.08□□□□□ -1.12
NECAP1-227ENST00000640648 CYP7B1O75881 506 aa8.08□□□□□ -1.12
NECAP1-227ENST00000640648 RSL1D1O76021 490 aaKnown RBP8.08□□□□□ -1.12
NECAP1-227ENST00000640648 F10P00742 488 aa8.08□□□□□ -1.12
NECAP1-227ENST00000640648 PPP2R1BP30154 601 aa8.08□□□□□ -1.12
NECAP1-227ENST00000640648 TM4SF1P30408 202 aa8.08□□□□□ -1.12
NECAP1-227ENST00000640648 MEOX2P50222 304 aa8.08□□□□□ -1.12
NECAP1-227ENST00000640648 CAP1Q01518 475 aa8.08□□□□□ -1.12
NECAP1-227ENST00000640648 MEDAGQ5VYS4 303 aa8.08□□□□□ -1.12
NECAP1-227ENST00000640648 KIAA1614Q5VZ46 1190 aa8.08□□□□□ -1.12
NECAP1-227ENST00000640648 NANOGP8Q6NSW7 305 aa8.08□□□□□ -1.12
NECAP1-227ENST00000640648 RETSATQ6NUM9 610 aa8.08□□□□□ -1.12
NECAP1-227ENST00000640648 NCEH1Q6PIU2 408 aa8.08□□□□□ -1.12
NECAP1-227ENST00000640648 PAPD4Q6PIY7 484 aaKnown RBP8.08□□□□□ -1.12
NECAP1-227ENST00000640648 CFAP77Q6ZQR2 320 aa8.08□□□□□ -1.12
NECAP1-227ENST00000640648 RTL4Q6ZR62 310 aa8.08□□□□□ -1.12
NECAP1-227ENST00000640648 HID1Q8IV36 788 aa8.08□□□□□ -1.12
NECAP1-227ENST00000640648 IZUMO1Q8IYV9 350 aa8.08□□□□□ -1.12
NECAP1-227ENST00000640648 MINDY1Q8N5J2 469 aa8.08□□□□□ -1.12
NECAP1-227ENST00000640648 UXS1Q8NBZ7 420 aa8.08□□□□□ -1.12
NECAP1-227ENST00000640648 SLC7A6Q92536 515 aa8.08□□□□□ -1.12
NECAP1-227ENST00000640648 CLIP3Q96DZ5 547 aa8.08□□□□□ -1.12
NECAP1-227ENST00000640648 UROC1Q96N76 676 aa8.08□□□□□ -1.12
NECAP1-227ENST00000640648 SMAD5Q99717 465 aaKnown RBP8.08□□□□□ -1.12
NECAP1-227ENST00000640648 POPDC2Q9HBU9 364 aa8.08□□□□□ -1.12
NECAP1-227ENST00000640648 XPNPEP1Q9NQW7 623 aa8.08□□□□□ -1.12
NECAP1-227ENST00000640648 SLC22A11Q9NSA0 550 aa8.08□□□□□ -1.12
NECAP1-227ENST00000640648 IMP3Q9NV31 184 aaKnown RBP8.08□□□□□ -1.12
NECAP1-227ENST00000640648 KLHL28Q9NXS3 571 aa8.08□□□□□ -1.12
NECAP1-227ENST00000640648 SLC9A8Q9Y2E8 581 aa8.08□□□□□ -1.12
NECAP1-227ENST00000640648 IRS2Q9Y4H2 1338 aa8.08□□□□□ -1.12
NECAP1-227ENST00000640648 FAM234BA2RU67 622 aa8.08□□□□□ -1.12
NECAP1-227ENST00000640648 ARPC2O15144 300 aa8.08□□□□□ -1.12
NECAP1-227ENST00000640648 CAPN5O15484 640 aaPredicted RBP8.08□□□□□ -1.12
NECAP1-227ENST00000640648 CPSF4O95639 269 aaKnown RBP8.08□□□□□ -1.12
NECAP1-227ENST00000640648 CPNE6O95741 557 aa8.08□□□□□ -1.12
NECAP1-227ENST00000640648 CSN2P05814 226 aa8.08□□□□□ -1.12
NECAP1-227ENST00000640648 FABP1P07148 127 aa8.08□□□□□ -1.12
NECAP1-227ENST00000640648 GM2AP17900 193 aa8.08□□□□□ -1.12
NECAP1-227ENST00000640648 MPSTP25325 297 aa8.08□□□□□ -1.12
NECAP1-227ENST00000640648 RFC2P35250 354 aa8.08□□□□□ -1.12
NECAP1-227ENST00000640648 AFF1P51825 1210 aaKnown RBP8.08□□□□□ -1.12
NECAP1-227ENST00000640648 PSMA6P60900 246 aaKnown RBP8.08□□□□□ -1.12
NECAP1-227ENST00000640648 RAP2BP61225 183 aa8.08□□□□□ -1.12
NECAP1-227ENST00000640648 DBPQ10586 325 aaPredicted RBP8.08□□□□□ -1.12
NECAP1-227ENST00000640648 PKN3Q6P5Z2 889 aa8.08□□□□□ -1.12
NECAP1-227ENST00000640648 AGMOQ6ZNB7 445 aa8.08□□□□□ -1.12
NECAP1-227ENST00000640648 ZNF704Q6ZNC4 412 aaPredicted RBP8.08□□□□□ -1.12
NECAP1-227ENST00000640648 MOB2Q70IA6 237 aa8.08□□□□□ -1.12
NECAP1-227ENST00000640648 CDH26Q8IXH8 852 aa8.08□□□□□ -1.12
NECAP1-227ENST00000640648 CERKQ8TCT0 537 aa8.08□□□□□ -1.12
NECAP1-227ENST00000640648 SMG7Q92540 1137 aaKnown RBP8.08□□□□□ -1.12
NECAP1-227ENST00000640648 ZFP42Q96MM3 310 aa8.08□□□□□ -1.12
NECAP1-227ENST00000640648 PGLYRP2Q96PD5 576 aa8.08□□□□□ -1.12
NECAP1-227ENST00000640648 ZNF670Q9BS34 389 aa8.08□□□□□ -1.12
NECAP1-227ENST00000640648 CNPPD1Q9BV87 410 aa8.08□□□□□ -1.12
NECAP1-227ENST00000640648 OCEL1Q9H607 264 aa8.08□□□□□ -1.12
NECAP1-227ENST00000640648 SDHAF2Q9NX18 166 aa8.08□□□□□ -1.12
NECAP1-227ENST00000640648 EGFL7Q9UHF1 273 aa8.08□□□□□ -1.12
NECAP1-227ENST00000640648 RIPK3Q9Y572 518 aa8.08□□□□□ -1.12
NECAP1-227ENST00000640648 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.08□□□□□ -1.12
NECAP1-227ENST00000640648 A0A1B0GVC2 190 aa8.08□□□□□ -1.12
NECAP1-227ENST00000640648 KCNU1A8MYU2 1149 aa8.08□□□□□ -1.12
NECAP1-227ENST00000640648 F5H5T6 163 aa8.08□□□□□ -1.12
NECAP1-227ENST00000640648 SUV39H1O43463 412 aa8.08□□□□□ -1.12
NECAP1-227ENST00000640648 ZNF780AO75290 641 aaPredicted RBP8.08□□□□□ -1.12
NECAP1-227ENST00000640648 C4BPAP04003 597 aaKnown RBP8.08□□□□□ -1.12
NECAP1-227ENST00000640648 DDCP20711 480 aa8.08□□□□□ -1.12
NECAP1-227ENST00000640648 LHX1P48742 406 aa8.08□□□□□ -1.12
NECAP1-227ENST00000640648 GPR143P51810 404 aa8.08□□□□□ -1.12
NECAP1-227ENST00000640648 MC2RQ01718 297 aa8.08□□□□□ -1.12
NECAP1-227ENST00000640648 SLC13A2Q13183 592 aa8.08□□□□□ -1.12
NECAP1-227ENST00000640648 ZNF177Q13360 481 aaPredicted RBP8.08□□□□□ -1.12
NECAP1-227ENST00000640648 LRIT3Q3SXY7 679 aa8.08□□□□□ -1.12
NECAP1-227ENST00000640648 VARS2Q5ST30 1063 aaKnown RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms