RNA–Protein interactions for RNA: ENST00000640408.1

RTTN-218, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 5,589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-218ENST00000640408 COMMD7Q86VX2 200 aa5.54□□□□□ -1.52
RTTN-218ENST00000640408 PROSER1Q86XN7 944 aa5.54□□□□□ -1.52
RTTN-218ENST00000640408 RBFAQ8N0V3 343 aa5.54□□□□□ -1.52
RTTN-218ENST00000640408 CYP4Z2PQ8N1L4 340 aa5.54□□□□□ -1.52
RTTN-218ENST00000640408 TMEM130Q8N3G9 435 aa5.54□□□□□ -1.52
RTTN-218ENST00000640408 PQLC3Q8N755 202 aa5.54□□□□□ -1.52
RTTN-218ENST00000640408 UXS1Q8NBZ7 420 aa5.54□□□□□ -1.52
RTTN-218ENST00000640408 OR5J2Q8NH18 312 aa5.54□□□□□ -1.52
RTTN-218ENST00000640408 ZNF431Q8TF32 576 aaPredicted RBP5.54□□□□□ -1.52
RTTN-218ENST00000640408 CYB5D2Q8WUJ1 264 aa5.54□□□□□ -1.52
RTTN-218ENST00000640408 FCGR1BQ92637 280 aa5.54□□□□□ -1.52
RTTN-218ENST00000640408 LOXL4Q96JB6 756 aa5.54□□□□□ -1.52
RTTN-218ENST00000640408 KAT8Q9H7Z6 458 aaKnown RBP5.54□□□□□ -1.52
RTTN-218ENST00000640408 WDR70Q9NW82 654 aa5.54□□□□□ -1.52
RTTN-218ENST00000640408 ZSCAN32Q9NX65 697 aa5.54□□□□□ -1.52
RTTN-218ENST00000640408 LGALS13Q9UHV8 139 aa5.54□□□□□ -1.52
RTTN-218ENST00000640408 SSR3Q9UNL2 185 aa5.54□□□□□ -1.52
RTTN-218ENST00000640408 FNDC3AQ9Y2H6 1198 aaKnown RBP5.54□□□□□ -1.52
RTTN-218ENST00000640408 PRAMEF33A0A0G2JMD5 474 aa5.54□□□□□ -1.52
RTTN-218ENST00000640408 A0A1B0GTW7 788 aa5.54□□□□□ -1.52
RTTN-218ENST00000640408 DHRS12A0PJE2 317 aa5.54□□□□□ -1.52
RTTN-218ENST00000640408 PRAMEF10O60809 474 aa5.54□□□□□ -1.52
RTTN-218ENST00000640408 RASGRP1O95267 797 aa5.54□□□□□ -1.52
RTTN-218ENST00000640408 PAPSS2O95340 614 aaPredicted RBP5.54□□□□□ -1.52
RTTN-218ENST00000640408 ETS1P14921 441 aa5.54□□□□□ -1.52
RTTN-218ENST00000640408 RPL22P35268 128 aaKnown RBP5.54□□□□□ -1.52
RTTN-218ENST00000640408 OPRD1P41143 372 aa5.54□□□□□ -1.52
RTTN-218ENST00000640408 AP3S2P59780 193 aa5.54□□□□□ -1.52
RTTN-218ENST00000640408 SIM2Q14190 667 aaPredicted RBP5.54□□□□□ -1.52
RTTN-218ENST00000640408 FRG1Q14331 258 aaKnown RBP5.54□□□□□ -1.52
RTTN-218ENST00000640408 N4BP2L1Q5TBK1 243 aaPredicted RBP5.54□□□□□ -1.52
RTTN-218ENST00000640408 RAET1GQ6H3X3 334 aa5.54□□□□□ -1.52
RTTN-218ENST00000640408 MAMSTRQ6ZN01 415 aa5.54□□□□□ -1.52
RTTN-218ENST00000640408 BHLHA9Q7RTU4 235 aa5.54□□□□□ -1.52
RTTN-218ENST00000640408 SRFBP1Q8NEF9 429 aaKnown RBP5.54□□□□□ -1.52
RTTN-218ENST00000640408 ACTRT2Q8TDY3 377 aa5.54□□□□□ -1.52
RTTN-218ENST00000640408 PEBP4Q96S96 227 aa5.54□□□□□ -1.52
RTTN-218ENST00000640408 THUMPD3Q9BV44 507 aaKnown RBP5.54□□□□□ -1.52
RTTN-218ENST00000640408 ARMC7Q9H6L4 198 aa5.54□□□□□ -1.52
RTTN-218ENST00000640408 EIF3KQ9UBQ5 218 aaKnown RBP5.54□□□□□ -1.52
RTTN-218ENST00000640408 MUTYHQ9UIF7 546 aa5.54□□□□□ -1.52
RTTN-218ENST00000640408 PNMA8BQ9ULN7 279 aaPredicted RBP5.54□□□□□ -1.52
RTTN-218ENST00000640408 ANKRD66B4E2M5 251 aa5.53□□□□□ -1.52
RTTN-218ENST00000640408 WASH3PC4AMC7 463 aa5.53□□□□□ -1.52
RTTN-218ENST00000640408 PRSS44E7EML9 344 aa5.53□□□□□ -1.52
RTTN-218ENST00000640408 PRAMEF26H0Y7S4 382 aa5.53□□□□□ -1.52
RTTN-218ENST00000640408 H0Y858 1186 aa5.53□□□□□ -1.52
RTTN-218ENST00000640408 H0YJX3 145 aa5.53□□□□□ -1.52
RTTN-218ENST00000640408 PSMB4P28070 264 aa5.53□□□□□ -1.52
RTTN-218ENST00000640408 PKLRP30613 574 aa5.53□□□□□ -1.52
RTTN-218ENST00000640408 EIF2S3P41091 472 aaKnown RBP5.53□□□□□ -1.52
RTTN-218ENST00000640408 GRIA3P42263 894 aa5.53□□□□□ -1.52
RTTN-218ENST00000640408 PSMD4P55036 377 aaKnown RBP5.53□□□□□ -1.52
RTTN-218ENST00000640408 CSTF1Q05048 431 aaKnown RBP5.53□□□□□ -1.52
RTTN-218ENST00000640408 TAF1AQ15573 450 aaPredicted RBP5.53□□□□□ -1.52
RTTN-218ENST00000640408 MTX3Q5HYI7 312 aa5.53□□□□□ -1.52
RTTN-218ENST00000640408 LYSMD4Q5XG99 296 aa5.53□□□□□ -1.52
RTTN-218ENST00000640408 NADSYN1Q6IA69 706 aa5.53□□□□□ -1.52
RTTN-218ENST00000640408 NEPROQ6NW34 567 aa5.53□□□□□ -1.52
RTTN-218ENST00000640408 HIPK1Q86Z02 1210 aa5.53□□□□□ -1.52
RTTN-218ENST00000640408 DEPDC4Q8N2C3 294 aa5.53□□□□□ -1.52
RTTN-218ENST00000640408 CBARPQ8N350 705 aaPredicted RBP5.53□□□□□ -1.52
RTTN-218ENST00000640408 MARVELD2Q8N4S9 558 aa5.53□□□□□ -1.52
RTTN-218ENST00000640408 GALNT11Q8NCW6 608 aa5.53□□□□□ -1.52
RTTN-218ENST00000640408 DNAJA4Q8WW22 397 aaPredicted RBP5.53□□□□□ -1.52
RTTN-218ENST00000640408 TMEM159Q96B96 161 aa5.53□□□□□ -1.52
RTTN-218ENST00000640408 SCRN2Q96FV2 425 aa5.53□□□□□ -1.52
RTTN-218ENST00000640408 IMP4Q96G21 291 aaKnown RBP5.53□□□□□ -1.52
RTTN-218ENST00000640408 MRPL48Q96GC5 212 aaKnown RBP5.53□□□□□ -1.52
RTTN-218ENST00000640408 ATXN7L3BQ96GX2 97 aa5.53□□□□□ -1.52
RTTN-218ENST00000640408 TDRD1Q9BXT4 1180 aaKnown RBP5.53□□□□□ -1.52
RTTN-218ENST00000640408 HDAC8Q9BY41 377 aa5.53□□□□□ -1.52
RTTN-218ENST00000640408 UCKL1Q9NWZ5 548 aa5.53□□□□□ -1.52
RTTN-218ENST00000640408 ANKMY1Q9P2S6 941 aa5.53□□□□□ -1.52
RTTN-218ENST00000640408 SPASTQ9UBP0 616 aa5.53□□□□□ -1.52
RTTN-218ENST00000640408 GMPPBQ9Y5P6 360 aa5.53□□□□□ -1.52
RTTN-218ENST00000640408 RGS10O43665 173 aa5.53□□□□□ -1.52
RTTN-218ENST00000640408 CRTAPO75718 401 aaPredicted RBP5.53□□□□□ -1.52
RTTN-218ENST00000640408 RPP40O75818 363 aaKnown RBP5.53□□□□□ -1.52
RTTN-218ENST00000640408 PGLSO95336 258 aa5.53□□□□□ -1.52
RTTN-218ENST00000640408 CATP04040 527 aaKnown RBP5.53□□□□□ -1.52
RTTN-218ENST00000640408 PGRP06401 933 aa5.53□□□□□ -1.52
RTTN-218ENST00000640408 NUDT7P0C024 238 aa5.53□□□□□ -1.52
RTTN-218ENST00000640408 TFPTP0C1Z6 253 aa5.53□□□□□ -1.52
RTTN-218ENST00000640408 PGAM1P18669 254 aa5.53□□□□□ -1.52
RTTN-218ENST00000640408 MYL12AP19105 171 aa5.53□□□□□ -1.52
RTTN-218ENST00000640408 MAGP20916 626 aa5.53□□□□□ -1.52
RTTN-218ENST00000640408 MARCKSL1P49006 195 aa5.53□□□□□ -1.52
RTTN-218ENST00000640408 RPL6Q02878 288 aaKnown RBP5.53□□□□□ -1.52
RTTN-218ENST00000640408 DNASE1L3Q13609 305 aa5.53□□□□□ -1.52
RTTN-218ENST00000640408 TRABD2AQ86V40 505 aa5.53□□□□□ -1.52
RTTN-218ENST00000640408 ZNF567Q8N184 647 aa5.53□□□□□ -1.52
RTTN-218ENST00000640408 ATG4AQ8WYN0 398 aa5.53□□□□□ -1.52
RTTN-218ENST00000640408 EXOC2Q96KP1 924 aa5.53□□□□□ -1.52
RTTN-218ENST00000640408 TNKS2Q9H2K2 1166 aa5.53□□□□□ -1.52
RTTN-218ENST00000640408 CD93Q9NPY3 652 aa5.53□□□□□ -1.52
RTTN-218ENST00000640408 MCUBQ9NWR8 336 aa5.53□□□□□ -1.52
RTTN-218ENST00000640408 AASSQ9UDR5 926 aa5.53□□□□□ -1.52
RTTN-218ENST00000640408 EIF3LQ9Y262 564 aaKnown RBP5.53□□□□□ -1.52
RTTN-218ENST00000640408 SNX10Q9Y5X0 201 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms