RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 TRPV4Q9HBA0 871 aa3.93□□□□□ -1.78
CCDC7-216ENST00000640058 PDE7BQ9NP56 450 aa3.93□□□□□ -1.78
CCDC7-216ENST00000640058 MYNNQ9NPC7 610 aa3.93□□□□□ -1.78
CCDC7-216ENST00000640058 CHST11Q9NPF2 352 aa3.93□□□□□ -1.78
CCDC7-216ENST00000640058 ABT1Q9ULW3 272 aaKnown RBP3.93□□□□□ -1.78
CCDC7-216ENST00000640058 RSF1Q96T23 1441 aaPredicted RBP3.93□□□□□ -1.78
CCDC7-216ENST00000640058 MYH15Q9Y2K3 1946 aa3.92□□□□□ -1.78
CCDC7-216ENST00000640058 NEMP2A6NFY4 417 aa3.92□□□□□ -1.78
CCDC7-216ENST00000640058 ASB14A6NK59 587 aa3.92□□□□□ -1.78
CCDC7-216ENST00000640058 IGHV2-70P01814 119 aa3.92□□□□□ -1.78
CCDC7-216ENST00000640058 DANCRP0C864 163 aa3.92□□□□□ -1.78
CCDC7-216ENST00000640058 PFKFB1P16118 471 aa3.92□□□□□ -1.78
CCDC7-216ENST00000640058 PORP16435 677 aaPredicted RBP3.92□□□□□ -1.78
CCDC7-216ENST00000640058 ALOX12P18054 663 aa3.92□□□□□ -1.78
CCDC7-216ENST00000640058 HLA-FP30511 346 aa3.92□□□□□ -1.78
CCDC7-216ENST00000640058 CDH18Q13634 790 aa3.92□□□□□ -1.78
CCDC7-216ENST00000640058 LY6DQ14210 128 aa3.92□□□□□ -1.78
CCDC7-216ENST00000640058 MEA1Q16626 185 aa3.92□□□□□ -1.78
CCDC7-216ENST00000640058 PHKG1Q16816 387 aa3.92□□□□□ -1.78
CCDC7-216ENST00000640058 FBXL16Q8N461 479 aa3.92□□□□□ -1.78
CCDC7-216ENST00000640058 LINC00612Q8N6U2 182 aa3.92□□□□□ -1.78
CCDC7-216ENST00000640058 CFAP61Q8NHU2 1237 aa3.92□□□□□ -1.78
CCDC7-216ENST00000640058 C4orf45Q96LM5 186 aa3.92□□□□□ -1.78
CCDC7-216ENST00000640058 B3GAT2Q9NPZ5 323 aa3.92□□□□□ -1.78
CCDC7-216ENST00000640058 MRPL15Q9P015 296 aaKnown RBP3.92□□□□□ -1.78
CCDC7-216ENST00000640058 CRNNQ9UBG3 495 aaPredicted RBP3.92□□□□□ -1.78
CCDC7-216ENST00000640058 MAN1B1Q9UKM7 699 aa3.92□□□□□ -1.78
CCDC7-216ENST00000640058 RNF150Q9ULK6 438 aa3.92□□□□□ -1.78
CCDC7-216ENST00000640058 TDRD15B5MCY1 1934 aaKnown RBP3.91□□□□□ -1.78
CCDC7-216ENST00000640058 A0A1W2PPR1 153 aa3.91□□□□□ -1.78
CCDC7-216ENST00000640058 HPRP00739 348 aa3.91□□□□□ -1.78
CCDC7-216ENST00000640058 PRKAR1AP10644 381 aa3.91□□□□□ -1.78
CCDC7-216ENST00000640058 RPL35AP18077 110 aaKnown RBP3.91□□□□□ -1.78
CCDC7-216ENST00000640058 CD27P26842 260 aa3.91□□□□□ -1.78
CCDC7-216ENST00000640058 MTHFRP42898 656 aa3.91□□□□□ -1.78
CCDC7-216ENST00000640058 PGFP49763 221 aa3.91□□□□□ -1.78
CCDC7-216ENST00000640058 DNA2P51530 1060 aa3.91□□□□□ -1.78
CCDC7-216ENST00000640058 ZNF75DP51815 510 aa3.91□□□□□ -1.78
CCDC7-216ENST00000640058 CUL4AQ13619 759 aa3.91□□□□□ -1.78
CCDC7-216ENST00000640058 TMEM132DQ14C87 1099 aa3.91□□□□□ -1.78
CCDC7-216ENST00000640058 RALBP1Q15311 655 aa3.91□□□□□ -1.78
CCDC7-216ENST00000640058 MCMDC2Q4G0Z9 681 aa3.91□□□□□ -1.78
CCDC7-216ENST00000640058 CBWD6Q4V339 395 aa3.91□□□□□ -1.78
CCDC7-216ENST00000640058 CBWD3Q5JTY5 395 aa3.91□□□□□ -1.78
CCDC7-216ENST00000640058 C6orf163Q5TEZ5 329 aa3.91□□□□□ -1.78
CCDC7-216ENST00000640058 METTL4Q8N3J2 472 aa3.91□□□□□ -1.78
CCDC7-216ENST00000640058 POM121L12Q8N7R1 296 aa3.91□□□□□ -1.78
CCDC7-216ENST00000640058 OR10Q1Q8NGQ4 319 aa3.91□□□□□ -1.78
CCDC7-216ENST00000640058 CHPT1Q8WUD6 406 aa3.91□□□□□ -1.78
CCDC7-216ENST00000640058 ATXN7L3BQ96GX2 97 aa3.91□□□□□ -1.78
CCDC7-216ENST00000640058 SLC45A3Q96JT2 553 aa3.91□□□□□ -1.78
CCDC7-216ENST00000640058 GAL3ST4Q96RP7 486 aa3.91□□□□□ -1.78
CCDC7-216ENST00000640058 LPAR4Q99677 370 aa3.91□□□□□ -1.78
CCDC7-216ENST00000640058 PANK2Q9BZ23 570 aa3.91□□□□□ -1.78
CCDC7-216ENST00000640058 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.91□□□□□ -1.78
CCDC7-216ENST00000640058 TBC1D22BQ9NU19 505 aa3.91□□□□□ -1.78
CCDC7-216ENST00000640058 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.91□□□□□ -1.78
CCDC7-216ENST00000640058 PRR34Q9NV39 138 aa3.91□□□□□ -1.78
CCDC7-216ENST00000640058 NDE1Q9NXR1 346 aa3.91□□□□□ -1.78
CCDC7-216ENST00000640058 WDR83OSQ9Y284 106 aa3.91□□□□□ -1.78
CCDC7-216ENST00000640058 KAT6BQ8WYB5 2073 aa3.91□□□□□ -1.78
CCDC7-216ENST00000640058 A0A087WUV0 522 aaPredicted RBP3.9□□□□□ -1.79
CCDC7-216ENST00000640058 THEGLP0DJG4 465 aa3.9□□□□□ -1.79
CCDC7-216ENST00000640058 PTGER4P35408 488 aa3.9□□□□□ -1.79
CCDC7-216ENST00000640058 LIMK2P53671 638 aa3.9□□□□□ -1.79
CCDC7-216ENST00000640058 STK4Q13043 487 aa3.9□□□□□ -1.79
CCDC7-216ENST00000640058 VEZF1Q14119 521 aa3.9□□□□□ -1.79
CCDC7-216ENST00000640058 SIM2Q14190 667 aaPredicted RBP3.9□□□□□ -1.79
CCDC7-216ENST00000640058 MAPRE1Q15691 268 aaKnown RBP3.9□□□□□ -1.79
CCDC7-216ENST00000640058 LEKR1Q6ZMV7 388 aa3.9□□□□□ -1.79
CCDC7-216ENST00000640058 FRRS1Q6ZNA5 592 aa3.9□□□□□ -1.79
CCDC7-216ENST00000640058 HPS6Q86YV9 775 aa3.9□□□□□ -1.79
CCDC7-216ENST00000640058 C17orf47Q8NEP4 570 aa3.9□□□□□ -1.79
CCDC7-216ENST00000640058 OR4K1Q8NGD4 311 aa3.9□□□□□ -1.79
CCDC7-216ENST00000640058 CNRIP1Q96F85 164 aaPredicted RBP3.9□□□□□ -1.79
CCDC7-216ENST00000640058 ABHD1Q96SE0 405 aa3.9□□□□□ -1.79
CCDC7-216ENST00000640058 MXD3Q9BW11 206 aa3.9□□□□□ -1.79
CCDC7-216ENST00000640058 TDRD1Q9BXT4 1180 aaKnown RBP3.9□□□□□ -1.79
CCDC7-216ENST00000640058 PUS3Q9BZE2 481 aaKnown RBP3.9□□□□□ -1.79
CCDC7-216ENST00000640058 PRMT7Q9NVM4 692 aaPredicted RBP3.9□□□□□ -1.79
CCDC7-216ENST00000640058 SLC24A2Q9UI40 661 aa3.9□□□□□ -1.79
CCDC7-216ENST00000640058 RARRES3Q9UL19 164 aa3.9□□□□□ -1.79
CCDC7-216ENST00000640058 PPIEQ9UNP9 301 aaKnown RBP3.9□□□□□ -1.79
CCDC7-216ENST00000640058 GPR34Q9UPC5 381 aa3.9□□□□□ -1.79
CCDC7-216ENST00000640058 GLOD5A6NK44 160 aa3.89□□□□□ -1.79
CCDC7-216ENST00000640058 TEX28O15482 410 aa3.89□□□□□ -1.79
CCDC7-216ENST00000640058 RAB40ALP0C0E4 278 aa3.89□□□□□ -1.79
CCDC7-216ENST00000640058 IRF2P14316 349 aa3.89□□□□□ -1.79
CCDC7-216ENST00000640058 PDHA2P29803 388 aa3.89□□□□□ -1.79
CCDC7-216ENST00000640058 OXTRP30559 389 aa3.89□□□□□ -1.79
CCDC7-216ENST00000640058 SOX3P41225 446 aa3.89□□□□□ -1.79
CCDC7-216ENST00000640058 PTGER3P43115 390 aa3.89□□□□□ -1.79
CCDC7-216ENST00000640058 KLC1Q07866 573 aa3.89□□□□□ -1.79
CCDC7-216ENST00000640058 BAATQ14032 418 aaPredicted RBP3.89□□□□□ -1.79
CCDC7-216ENST00000640058 FAM189A2Q15884 450 aa3.89□□□□□ -1.79
CCDC7-216ENST00000640058 SLC25A30Q5SVS4 291 aa3.89□□□□□ -1.79
CCDC7-216ENST00000640058 NOTUMQ6P988 496 aa3.89□□□□□ -1.79
CCDC7-216ENST00000640058 GDPGP1Q6ZNW5 385 aa3.89□□□□□ -1.79
CCDC7-216ENST00000640058 SLC47A2Q86VL8 602 aa3.89□□□□□ -1.79
CCDC7-216ENST00000640058 DNAAF5Q86Y56 855 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms