RNA–Protein interactions for RNA: ENST00000639955.1

NECAP1-221, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NECAP1, Length 3,479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-221ENST00000639955 KDELR3O43731 214 aa7.5□□□□□ -1.21
NECAP1-221ENST00000639955 CLPXO76031 633 aa7.5□□□□□ -1.21
NECAP1-221ENST00000639955 APOL3O95236 402 aa7.5□□□□□ -1.21
NECAP1-221ENST00000639955 VNN2O95498 520 aa7.5□□□□□ -1.21
NECAP1-221ENST00000639955 KRT6AP02538 564 aa7.5□□□□□ -1.21
NECAP1-221ENST00000639955 KRT6BP04259 564 aa7.5□□□□□ -1.21
NECAP1-221ENST00000639955 SERPIND1P05546 499 aa7.5□□□□□ -1.21
NECAP1-221ENST00000639955 HTR1AP08908 422 aa7.5□□□□□ -1.21
NECAP1-221ENST00000639955 ENGP17813 658 aa7.5□□□□□ -1.21
NECAP1-221ENST00000639955 ALOX12P18054 663 aa7.5□□□□□ -1.21
NECAP1-221ENST00000639955 MSH3P20585 1137 aa7.5□□□□□ -1.21
NECAP1-221ENST00000639955 HTR1EP28566 365 aa7.5□□□□□ -1.21
NECAP1-221ENST00000639955 CD70P32970 193 aa7.5□□□□□ -1.21
NECAP1-221ENST00000639955 PTGER3P43115 390 aa7.5□□□□□ -1.21
NECAP1-221ENST00000639955 KRT6CP48668 564 aa7.5□□□□□ -1.21
NECAP1-221ENST00000639955 CACNG1Q06432 222 aa7.5□□□□□ -1.21
NECAP1-221ENST00000639955 NFATC2Q13469 925 aa7.5□□□□□ -1.21
NECAP1-221ENST00000639955 DSC3Q14574 896 aa7.5□□□□□ -1.21
NECAP1-221ENST00000639955 PDCD4Q53EL6 469 aaKnown RBP7.5□□□□□ -1.21
NECAP1-221ENST00000639955 FAM209AQ5JX71 171 aa7.5□□□□□ -1.21
NECAP1-221ENST00000639955 ARTNQ5T4W7 220 aa7.5□□□□□ -1.21
NECAP1-221ENST00000639955 ADGRF1Q5T601 910 aa7.5□□□□□ -1.21
NECAP1-221ENST00000639955 KLHL17Q6TDP4 642 aa7.5□□□□□ -1.21
NECAP1-221ENST00000639955 Q6ZVU0 165 aa7.5□□□□□ -1.21
NECAP1-221ENST00000639955 VASH1Q7L8A9 365 aaPredicted RBP7.5□□□□□ -1.21
NECAP1-221ENST00000639955 BPHLQ86WA6 291 aaPredicted RBP7.5□□□□□ -1.21
NECAP1-221ENST00000639955 MEX3DQ86XN8 651 aaKnown RBP7.5□□□□□ -1.21
NECAP1-221ENST00000639955 MSRB3Q8IXL7 192 aa7.5□□□□□ -1.21
NECAP1-221ENST00000639955 DEPDC4Q8N2C3 294 aa7.5□□□□□ -1.21
NECAP1-221ENST00000639955 GPR26Q8NDV2 337 aa7.5□□□□□ -1.21
NECAP1-221ENST00000639955 ZNF548Q8NEK5 533 aaPredicted RBP7.5□□□□□ -1.21
NECAP1-221ENST00000639955 CAPSLQ8WWF8 208 aa7.5□□□□□ -1.21
NECAP1-221ENST00000639955 UPF1Q92900 1129 aaKnown RBP eCLIP7.5□□□□□ -1.214e-7■■■□□ 15.7
NECAP1-221ENST00000639955 MBOAT4Q96T53 435 aa7.5□□□□□ -1.21
NECAP1-221ENST00000639955 NRTNQ99748 197 aa7.5□□□□□ -1.21
NECAP1-221ENST00000639955 CHCHD6Q9BRQ6 235 aa7.5□□□□□ -1.21
NECAP1-221ENST00000639955 MARCH5Q9NX47 278 aa7.5□□□□□ -1.21
NECAP1-221ENST00000639955 NUDT4Q9NZJ9 180 aa7.5□□□□□ -1.21
NECAP1-221ENST00000639955 IL17CQ9P0M4 197 aa7.5□□□□□ -1.21
NECAP1-221ENST00000639955 CFAP97Q9P2B7 532 aa7.5□□□□□ -1.21
NECAP1-221ENST00000639955 DNAJB9Q9UBS3 223 aa7.5□□□□□ -1.21
NECAP1-221ENST00000639955 PADI4Q9UM07 663 aa7.5□□□□□ -1.21
NECAP1-221ENST00000639955 UPK1AO00322 258 aa7.5□□□□□ -1.21
NECAP1-221ENST00000639955 AOC2O75106 756 aa7.5□□□□□ -1.21
NECAP1-221ENST00000639955 ADAMTS4O75173 837 aa7.5□□□□□ -1.21
NECAP1-221ENST00000639955 ANXA5P08758 320 aa7.5□□□□□ -1.21
NECAP1-221ENST00000639955 DGKAP23743 735 aa7.5□□□□□ -1.21
NECAP1-221ENST00000639955 GABRR2P28476 465 aa7.5□□□□□ -1.21
NECAP1-221ENST00000639955 TPTEP56180 551 aa7.5□□□□□ -1.21
NECAP1-221ENST00000639955 ADARB1P78563 741 aaKnown RBP7.5□□□□□ -1.21
NECAP1-221ENST00000639955 VLDLRP98155 873 aa7.5□□□□□ -1.21
NECAP1-221ENST00000639955 MVKQ03426 396 aa7.5□□□□□ -1.21
NECAP1-221ENST00000639955 UBE3AQ05086 875 aa7.5□□□□□ -1.21
NECAP1-221ENST00000639955 GPR17Q13304 367 aa7.5□□□□□ -1.21
NECAP1-221ENST00000639955 NAE1Q13564 534 aa7.5□□□□□ -1.21
NECAP1-221ENST00000639955 DPY19L1Q2PZI1 675 aa7.5□□□□□ -1.21
NECAP1-221ENST00000639955 ZNF829Q3KNS6 432 aaPredicted RBP7.5□□□□□ -1.21
NECAP1-221ENST00000639955 CCSMST1Q4G0I0 132 aa7.5□□□□□ -1.21
NECAP1-221ENST00000639955 RUNDC3AQ59EK9 446 aa7.5□□□□□ -1.21
NECAP1-221ENST00000639955 ZNF697Q5TEC3 545 aa7.5□□□□□ -1.21
NECAP1-221ENST00000639955 CXorf57Q6NSI4 855 aaKnown RBP7.5□□□□□ -1.21
NECAP1-221ENST00000639955 BORAQ6PGQ7 559 aa7.5□□□□□ -1.21
NECAP1-221ENST00000639955 CYP2U1Q7Z449 544 aa7.5□□□□□ -1.21
NECAP1-221ENST00000639955 ZSWIM9Q86XI8 627 aa7.5□□□□□ -1.21
NECAP1-221ENST00000639955 RBFAQ8N0V3 343 aa7.5□□□□□ -1.21
NECAP1-221ENST00000639955 TMEM132CQ8N3T6 1108 aa7.5□□□□□ -1.21
NECAP1-221ENST00000639955 TTC29Q8NA56 475 aaPredicted RBP7.5□□□□□ -1.21
NECAP1-221ENST00000639955 FUBP3Q96I24 572 aaKnown RBP eCLIP7.5□□□□□ -1.21
NECAP1-221ENST00000639955 UROC1Q96N76 676 aa7.5□□□□□ -1.21
NECAP1-221ENST00000639955 CD320Q9NPF0 282 aa7.5□□□□□ -1.21
NECAP1-221ENST00000639955 ABCB8Q9NUT2 735 aa7.5□□□□□ -1.21
NECAP1-221ENST00000639955 FAIMQ9NVQ4 179 aa7.5□□□□□ -1.21
NECAP1-221ENST00000639955 C1orf109Q9NX04 203 aa7.5□□□□□ -1.21
NECAP1-221ENST00000639955 GNPTGQ9UJJ9 305 aa7.5□□□□□ -1.21
NECAP1-221ENST00000639955 DHRS7Q9Y394 339 aa7.5□□□□□ -1.21
NECAP1-221ENST00000639955 DNMT3AQ9Y6K1 912 aaPredicted RBP7.5□□□□□ -1.21
NECAP1-221ENST00000639955 ZSWIM8A7E2V4 1837 aa7.49□□□□□ -1.21
NECAP1-221ENST00000639955 RFXAPO00287 272 aa7.49□□□□□ -1.21
NECAP1-221ENST00000639955 STX16O14662 325 aa7.49□□□□□ -1.21
NECAP1-221ENST00000639955 WISP3O95389 354 aaPredicted RBP7.49□□□□□ -1.21
NECAP1-221ENST00000639955 CLDN9O95484 217 aa7.49□□□□□ -1.21
NECAP1-221ENST00000639955 GALTP07902 379 aa7.49□□□□□ -1.21
NECAP1-221ENST00000639955 XPAP23025 273 aaPredicted RBP7.49□□□□□ -1.21
NECAP1-221ENST00000639955 KIR3DL1P43629 444 aa7.49□□□□□ -1.21
NECAP1-221ENST00000639955 BDKRB1P46663 353 aa7.49□□□□□ -1.21
NECAP1-221ENST00000639955 PSMD8P48556 350 aa7.49□□□□□ -1.21
NECAP1-221ENST00000639955 RPS26P62854 115 aaKnown RBP7.49□□□□□ -1.21
NECAP1-221ENST00000639955 EMX1Q04741 257 aaPredicted RBP7.49□□□□□ -1.21
NECAP1-221ENST00000639955 XAF1Q6GPH4 301 aa7.49□□□□□ -1.21
NECAP1-221ENST00000639955 BBS7Q8IWZ6 715 aa7.49□□□□□ -1.21
NECAP1-221ENST00000639955 PACRGLQ8N7B6 248 aa7.49□□□□□ -1.21
NECAP1-221ENST00000639955 GOLM1Q8NBJ4 401 aa7.49□□□□□ -1.21
NECAP1-221ENST00000639955 BPIFB1Q8TDL5 484 aa7.49□□□□□ -1.21
NECAP1-221ENST00000639955 HSH2DQ96JZ2 352 aa7.49□□□□□ -1.21
NECAP1-221ENST00000639955 COPS8Q99627 209 aa7.49□□□□□ -1.21
NECAP1-221ENST00000639955 NUSAP1Q9BXS6 441 aaKnown RBP7.49□□□□□ -1.21
NECAP1-221ENST00000639955 ZBTB20Q9HC78 741 aaPredicted RBP7.49□□□□□ -1.21
NECAP1-221ENST00000639955 TRIM39Q9HCM9 518 aa7.49□□□□□ -1.21
NECAP1-221ENST00000639955 SLC52A3Q9NQ40 469 aa7.49□□□□□ -1.21
NECAP1-221ENST00000639955 MAP4K5Q9Y4K4 846 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms