RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 MRPS30Q9NP92 439 aaKnown RBP16.97■□□□□ 0.31
PTPN11-207ENST00000639857 PPANQ9NQ55 473 aaKnown RBP16.97■□□□□ 0.31
PTPN11-207ENST00000639857 WHRNQ9P202 907 aa16.97■□□□□ 0.31
PTPN11-207ENST00000639857 DHCR7Q9UBM7 475 aaKnown RBP16.97■□□□□ 0.31
PTPN11-207ENST00000639857 NDOR1Q9UHB4 597 aa16.97■□□□□ 0.31
PTPN11-207ENST00000639857 GCN1Q92616 2671 aaKnown RBP16.96■□□□□ 0.31
PTPN11-207ENST00000639857 E7ENX8 843 aa16.96■□□□□ 0.31
PTPN11-207ENST00000639857 J3QKU1 62 aa16.96■□□□□ 0.31
PTPN11-207ENST00000639857 DSCR3O14972 297 aa16.96■□□□□ 0.31
PTPN11-207ENST00000639857 SUV39H1O43463 412 aa16.96■□□□□ 0.31
PTPN11-207ENST00000639857 SLC28A2O43868 658 aa16.96■□□□□ 0.31
PTPN11-207ENST00000639857 CTSVO60911 334 aa16.96■□□□□ 0.31
PTPN11-207ENST00000639857 KLF7O75840 302 aaPredicted RBP16.96■□□□□ 0.31
PTPN11-207ENST00000639857 MCM3P25205 808 aa16.96■□□□□ 0.31
PTPN11-207ENST00000639857 EMP3P54852 163 aa16.96■□□□□ 0.31
PTPN11-207ENST00000639857 TIAL1Q01085 375 aaKnown RBP eCLIP16.96■□□□□ 0.31
PTPN11-207ENST00000639857 TAP2Q03519 686 aa16.96■□□□□ 0.31
PTPN11-207ENST00000639857 PRDX1Q06830 199 aaKnown RBP16.96■□□□□ 0.31
PTPN11-207ENST00000639857 CALCOCO2Q13137 446 aa16.96■□□□□ 0.31
PTPN11-207ENST00000639857 NKAIN1Q4KMZ8 207 aa16.96■□□□□ 0.31
PTPN11-207ENST00000639857 ICE2Q659A1 982 aa16.96■□□□□ 0.31
PTPN11-207ENST00000639857 FAM45BPQ6NSW5 357 aa16.96■□□□□ 0.31
PTPN11-207ENST00000639857 MRPL14Q6P1L8 145 aaKnown RBP16.96■□□□□ 0.31
PTPN11-207ENST00000639857 UBE2R2Q712K3 238 aaPredicted RBP16.96■□□□□ 0.31
PTPN11-207ENST00000639857 PIWIL4Q7Z3Z4 852 aaKnown RBP16.96■□□□□ 0.31
PTPN11-207ENST00000639857 PALM2Q8IXS6 379 aa16.96■□□□□ 0.31
PTPN11-207ENST00000639857 MYO1HQ8N1T3 1032 aa16.96■□□□□ 0.31
PTPN11-207ENST00000639857 TMEM102Q8N9M5 508 aaPredicted RBP16.96■□□□□ 0.31
PTPN11-207ENST00000639857 FAM45AQ8TCE6 357 aa16.96■□□□□ 0.31
PTPN11-207ENST00000639857 MCOLN3Q8TDD5 553 aa16.96■□□□□ 0.31
PTPN11-207ENST00000639857 NACC2Q96BF6 587 aa16.96■□□□□ 0.31
PTPN11-207ENST00000639857 ZFYVE21Q9BQ24 234 aa16.96■□□□□ 0.31
PTPN11-207ENST00000639857 PLCD4Q9BRC7 762 aa16.96■□□□□ 0.31
PTPN11-207ENST00000639857 ERP44Q9BS26 406 aa16.96■□□□□ 0.31
PTPN11-207ENST00000639857 DPH7Q9BTV6 452 aa16.96■□□□□ 0.31
PTPN11-207ENST00000639857 TRIM31Q9BZY9 425 aa16.96■□□□□ 0.31
PTPN11-207ENST00000639857 CUTCQ9NTM9 273 aa16.96■□□□□ 0.31
PTPN11-207ENST00000639857 IFT80Q9P2H3 777 aaPredicted RBP16.96■□□□□ 0.31
PTPN11-207ENST00000639857 ANAPC2Q9UJX6 822 aa16.96■□□□□ 0.31
PTPN11-207ENST00000639857 PCDHGA9Q9Y5G4 932 aaKnown RBP16.96■□□□□ 0.31
PTPN11-207ENST00000639857 EIF3HO15372 352 aaKnown RBP eCLIP16.95■□□□□ 0.3
PTPN11-207ENST00000639857 SYF2O95926 243 aaKnown RBP16.95■□□□□ 0.3
PTPN11-207ENST00000639857 IGHEP01854 428 aa16.95■□□□□ 0.3
PTPN11-207ENST00000639857 ALBP02768 609 aa16.95■□□□□ 0.3
PTPN11-207ENST00000639857 CTSBP07858 339 aa16.95■□□□□ 0.3
PTPN11-207ENST00000639857 EZRP15311 586 aaKnown RBP16.95■□□□□ 0.3
PTPN11-207ENST00000639857 RRADP55042 308 aa16.95■□□□□ 0.3
PTPN11-207ENST00000639857 PDIA2Q13087 525 aaKnown RBP16.95■□□□□ 0.3
PTPN11-207ENST00000639857 SSPNQ14714 243 aa16.95■□□□□ 0.3
PTPN11-207ENST00000639857 RBM20Q5T481 1227 aaKnown RBP16.95■□□□□ 0.3
PTPN11-207ENST00000639857 C1orf189Q5VU69 101 aa16.95■□□□□ 0.3
PTPN11-207ENST00000639857 ZNF425Q6IV72 752 aa16.95■□□□□ 0.3
PTPN11-207ENST00000639857 TRMT10BQ6PF06 316 aaKnown RBP16.95■□□□□ 0.3
PTPN11-207ENST00000639857 SUSD1Q6UWL2 747 aa16.95■□□□□ 0.3
PTPN11-207ENST00000639857 MED25Q71SY5 747 aa16.95■□□□□ 0.3
PTPN11-207ENST00000639857 PRICKLE2Q7Z3G6 844 aa16.95■□□□□ 0.3
PTPN11-207ENST00000639857 SLC26A11Q86WA9 606 aa16.95■□□□□ 0.3
PTPN11-207ENST00000639857 LRRC56Q8IYG6 542 aaPredicted RBP16.95■□□□□ 0.3
PTPN11-207ENST00000639857 OR2Y1Q8NGV0 311 aa16.95■□□□□ 0.3
PTPN11-207ENST00000639857 CCDC138Q96M89 665 aa16.95■□□□□ 0.3
PTPN11-207ENST00000639857 PWWP2AQ96N64 755 aa16.95■□□□□ 0.3
PTPN11-207ENST00000639857 PHACTR1Q9C0D0 580 aa16.95■□□□□ 0.3
PTPN11-207ENST00000639857 PCBD2Q9H0N5 130 aa16.95■□□□□ 0.3
PTPN11-207ENST00000639857 SLC26A1Q9H2B4 701 aa16.95■□□□□ 0.3
PTPN11-207ENST00000639857 WDR54Q9H977 334 aa16.95■□□□□ 0.3
PTPN11-207ENST00000639857 SLC6A20Q9NP91 592 aa16.95■□□□□ 0.3
PTPN11-207ENST00000639857 NSMCE4AQ9NXX6 385 aa16.95■□□□□ 0.3
PTPN11-207ENST00000639857 MOCS1Q9NZB8 636 aa16.95■□□□□ 0.3
PTPN11-207ENST00000639857 ZFATQ9P243 1243 aa16.95■□□□□ 0.3
PTPN11-207ENST00000639857 TAC3Q9UHF0 121 aa16.95■□□□□ 0.3
PTPN11-207ENST00000639857 TLK1Q9UKI8 766 aa16.95■□□□□ 0.3
PTPN11-207ENST00000639857 FDXRP22570 491 aa16.94■□□□□ 0.3
PTPN11-207ENST00000639857 CCND1P24385 295 aa16.94■□□□□ 0.3
PTPN11-207ENST00000639857 HRH2P25021 359 aa16.94■□□□□ 0.3
PTPN11-207ENST00000639857 IMPA1P29218 277 aa16.94■□□□□ 0.3
PTPN11-207ENST00000639857 FOLR3P41439 243 aa16.94■□□□□ 0.3
PTPN11-207ENST00000639857 CDKN2DP55273 166 aa16.94■□□□□ 0.3
PTPN11-207ENST00000639857 IL2P60568 153 aa16.94■□□□□ 0.3
PTPN11-207ENST00000639857 NFKB2Q00653 900 aa16.94■□□□□ 0.3
PTPN11-207ENST00000639857 MGAT5Q09328 741 aa16.94■□□□□ 0.3
PTPN11-207ENST00000639857 PDAP1Q13442 181 aaKnown RBP16.94■□□□□ 0.3
PTPN11-207ENST00000639857 HP1BP3Q5SSJ5 553 aaPredicted RBP16.94■□□□□ 0.3
PTPN11-207ENST00000639857 MLIPQ5VWP3 458 aa16.94■□□□□ 0.3
PTPN11-207ENST00000639857 PAQR3Q6TCH7 311 aa16.94■□□□□ 0.3
PTPN11-207ENST00000639857 TTLL10Q6ZVT0 673 aa16.94■□□□□ 0.3
PTPN11-207ENST00000639857 ZNF572Q7Z3I7 529 aaPredicted RBP16.94■□□□□ 0.3
PTPN11-207ENST00000639857 PAQR7Q86WK9 346 aa16.94■□□□□ 0.3
PTPN11-207ENST00000639857 FBXO36Q8NEA4 188 aa16.94■□□□□ 0.3
PTPN11-207ENST00000639857 EEF1AKMT1Q8WVE0 214 aa16.94■□□□□ 0.3
PTPN11-207ENST00000639857 ACAT2Q9BWD1 397 aa16.94■□□□□ 0.3
PTPN11-207ENST00000639857 ING2Q9H160 280 aa16.94■□□□□ 0.3
PTPN11-207ENST00000639857 PARVBQ9HBI1 364 aa16.94■□□□□ 0.3
PTPN11-207ENST00000639857 ACSS2Q9NR19 701 aa16.94■□□□□ 0.3
PTPN11-207ENST00000639857 NXT1Q9UKK6 140 aaKnown RBP16.94■□□□□ 0.3
PTPN11-207ENST00000639857 VWA7Q9Y334 891 aa16.94■□□□□ 0.3
PTPN11-207ENST00000639857 SNX24Q9Y343 169 aa16.94■□□□□ 0.3
PTPN11-207ENST00000639857 PCDHGB7Q9Y5F8 929 aa16.94■□□□□ 0.3
PTPN11-207ENST00000639857 A0A0J9YVX5 310 aa16.93■□□□□ 0.3
PTPN11-207ENST00000639857 TXNDC9O14530 226 aa16.93■□□□□ 0.3
PTPN11-207ENST00000639857 CEACAM4O75871 244 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms