RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 SLC5A11Q8WWX8 675 aa14.84□□□□□ -0.03
CLN6-219ENST00000637329 NEIL2Q969S2 332 aa14.84□□□□□ -0.03
CLN6-219ENST00000637329 CMTM5Q96DZ9 223 aa14.84□□□□□ -0.03
CLN6-219ENST00000637329 CATSPER2Q96P56 530 aa14.84□□□□□ -0.03
CLN6-219ENST00000637329 FRG2BQ96QU4 278 aa14.84□□□□□ -0.03
CLN6-219ENST00000637329 ELOVL6Q9H5J4 265 aa14.84□□□□□ -0.03
CLN6-219ENST00000637329 PELI2Q9HAT8 420 aa14.84□□□□□ -0.03
CLN6-219ENST00000637329 POT1Q9NUX5 634 aa14.84□□□□□ -0.03
CLN6-219ENST00000637329 TMEM45AQ9NWC5 275 aa14.84□□□□□ -0.03
CLN6-219ENST00000637329 CIDEBQ9UHD4 219 aa14.84□□□□□ -0.03
CLN6-219ENST00000637329 TAGLN3Q9UI15 199 aa14.84□□□□□ -0.03
CLN6-219ENST00000637329 INVSQ9Y283 1065 aa14.84□□□□□ -0.03
CLN6-219ENST00000637329 TSC22D4Q9Y3Q8 395 aa14.84□□□□□ -0.03
CLN6-219ENST00000637329 PCDHGA11Q9Y5H2 935 aa14.84□□□□□ -0.03
CLN6-219ENST00000637329 PTGDR2Q9Y5Y4 395 aa14.84□□□□□ -0.03
CLN6-219ENST00000637329 ATP6AP2A0A1C7CYW4 349 aa14.83□□□□□ -0.04
CLN6-219ENST00000637329 MED19A0JLT2 244 aaPredicted RBP14.83□□□□□ -0.04
CLN6-219ENST00000637329 FAM221BA6H8Z2 402 aa14.83□□□□□ -0.04
CLN6-219ENST00000637329 FFAR3O14843 346 aa14.83□□□□□ -0.04
CLN6-219ENST00000637329 LSM1O15116 133 aaKnown RBP14.83□□□□□ -0.04
CLN6-219ENST00000637329 VILLO15195 856 aa14.83□□□□□ -0.04
CLN6-219ENST00000637329 GPR42O15529 346 aa14.83□□□□□ -0.04
CLN6-219ENST00000637329 ATP6AP2O75787 350 aa14.83□□□□□ -0.04
CLN6-219ENST00000637329 RSL1D1O76021 490 aaKnown RBP14.83□□□□□ -0.04
CLN6-219ENST00000637329 WNT1P04628 370 aa14.83□□□□□ -0.04
CLN6-219ENST00000637329 CTSEP14091 401 aa14.83□□□□□ -0.04
CLN6-219ENST00000637329 ACPPP15309 386 aa14.83□□□□□ -0.04
CLN6-219ENST00000637329 NPPBP16860 134 aa14.83□□□□□ -0.04
CLN6-219ENST00000637329 PRPH2P23942 346 aa14.83□□□□□ -0.04
CLN6-219ENST00000637329 AFF3P51826 1226 aaKnown RBP14.83□□□□□ -0.04
CLN6-219ENST00000637329 NXPH1P58417 271 aa14.83□□□□□ -0.04
CLN6-219ENST00000637329 NCALDP61601 193 aa14.83□□□□□ -0.04
CLN6-219ENST00000637329 DMWDQ09019 674 aa14.83□□□□□ -0.04
CLN6-219ENST00000637329 GRIK2Q13002 908 aa14.83□□□□□ -0.04
CLN6-219ENST00000637329 KLF10Q13118 480 aa14.83□□□□□ -0.04
CLN6-219ENST00000637329 PRKG2Q13237 762 aa14.83□□□□□ -0.04
CLN6-219ENST00000637329 FASTKQ14296 549 aaKnown RBP14.83□□□□□ -0.04
CLN6-219ENST00000637329 ABRAXAS2Q15018 415 aa14.83□□□□□ -0.04
CLN6-219ENST00000637329 ELOCQ15369 112 aa14.83□□□□□ -0.04
CLN6-219ENST00000637329 NR6A1Q15406 480 aa14.83□□□□□ -0.04
CLN6-219ENST00000637329 MAPRE2Q15555 327 aa14.83□□□□□ -0.04
CLN6-219ENST00000637329 ZRSR2Q15696 482 aaKnown RBP14.83□□□□□ -0.04
CLN6-219ENST00000637329 CPSF6Q16630 551 aaKnown RBP eCLIP14.83□□□□□ -0.04
CLN6-219ENST00000637329 THEMIS2Q5TEJ8 643 aa14.83□□□□□ -0.04
CLN6-219ENST00000637329 TMEM198Q66K66 360 aa14.83□□□□□ -0.04
CLN6-219ENST00000637329 TMPRSS11BQ86T26 416 aa14.83□□□□□ -0.04
CLN6-219ENST00000637329 C17orf64Q86WR6 236 aa14.83□□□□□ -0.04
CLN6-219ENST00000637329 RBM12BQ8IXT5 1001 aaKnown RBP14.83□□□□□ -0.04
CLN6-219ENST00000637329 UBE2E3Q969T4 207 aa14.83□□□□□ -0.04
CLN6-219ENST00000637329 CXorf40BQ96DE9 158 aa14.83□□□□□ -0.04
CLN6-219ENST00000637329 NSL1Q96IY1 281 aa14.83□□□□□ -0.04
CLN6-219ENST00000637329 IL17FQ96PD4 163 aa14.83□□□□□ -0.04
CLN6-219ENST00000637329 LRRC61Q9BV99 259 aa14.83□□□□□ -0.04
CLN6-219ENST00000637329 PITHD1Q9GZP4 211 aaPredicted RBP14.83□□□□□ -0.04
CLN6-219ENST00000637329 LRMDAQ9H2I8 198 aa14.83□□□□□ -0.04
CLN6-219ENST00000637329 BRF2Q9HAW0 419 aa14.83□□□□□ -0.04
CLN6-219ENST00000637329 ARL8BQ9NVJ2 186 aa14.83□□□□□ -0.04
CLN6-219ENST00000637329 ASIC5Q9NY37 505 aa14.83□□□□□ -0.04
CLN6-219ENST00000637329 SCHIP1Q9P0W5 487 aaPredicted RBP14.83□□□□□ -0.04
CLN6-219ENST00000637329 TAAR2Q9P1P5 351 aa14.83□□□□□ -0.04
CLN6-219ENST00000637329 FBXO4Q9UKT5 387 aa14.83□□□□□ -0.04
CLN6-219ENST00000637329 ZNF490Q9ULM2 529 aaPredicted RBP14.83□□□□□ -0.04
CLN6-219ENST00000637329 PLAGL1Q9UM63 463 aa14.83□□□□□ -0.04
CLN6-219ENST00000637329 ICKQ9UPZ9 632 aa14.83□□□□□ -0.04
CLN6-219ENST00000637329 SLCO1B1Q9Y6L6 691 aa14.83□□□□□ -0.04
CLN6-219ENST00000637329 SCAMP1O15126 338 aa14.82□□□□□ -0.04
CLN6-219ENST00000637329 PRAMEF4O60810 478 aa14.82□□□□□ -0.04
CLN6-219ENST00000637329 CCNDBP1O95273 360 aa14.82□□□□□ -0.04
CLN6-219ENST00000637329 CBX6O95503 412 aa14.82□□□□□ -0.04
CLN6-219ENST00000637329 C1GALT1C1LP0DN25 315 aa14.82□□□□□ -0.04
CLN6-219ENST00000637329 T-ENOLP0DO92 83 aa14.82□□□□□ -0.04
CLN6-219ENST00000637329 ESRRAP11474 423 aaPredicted RBP14.82□□□□□ -0.04
CLN6-219ENST00000637329 JUNDP17535 347 aa14.82□□□□□ -0.04
CLN6-219ENST00000637329 XRCC1P18887 633 aaPredicted RBP14.82□□□□□ -0.04
CLN6-219ENST00000637329 CD22P20273 847 aa14.82□□□□□ -0.04
CLN6-219ENST00000637329 SERPINB1P30740 379 aa14.82□□□□□ -0.04
CLN6-219ENST00000637329 FNTBP49356 437 aa14.82□□□□□ -0.04
CLN6-219ENST00000637329 ACADVLP49748 655 aa14.82□□□□□ -0.04
CLN6-219ENST00000637329 NAA25Q14CX7 972 aa14.82□□□□□ -0.04
CLN6-219ENST00000637329 IMPG1Q17R60 797 aa14.82□□□□□ -0.04
CLN6-219ENST00000637329 PRAMEF9Q5VWM5 478 aa14.82□□□□□ -0.04
CLN6-219ENST00000637329 IYDQ6PHW0 289 aa14.82□□□□□ -0.04
CLN6-219ENST00000637329 NXPE4Q6UWF7 544 aa14.82□□□□□ -0.04
CLN6-219ENST00000637329 Q6ZSR9 355 aa14.82□□□□□ -0.04
CLN6-219ENST00000637329 C1orf210Q8IVY1 113 aa14.82□□□□□ -0.04
CLN6-219ENST00000637329 LINC01555Q8NAE3 123 aa14.82□□□□□ -0.04
CLN6-219ENST00000637329 OR2T11Q8NH01 316 aa14.82□□□□□ -0.04
CLN6-219ENST00000637329 CCL4L1Q8NHW4 92 aa14.82□□□□□ -0.04
CLN6-219ENST00000637329 WDR20Q8TBZ3 569 aa14.82□□□□□ -0.04
CLN6-219ENST00000637329 GAB3Q8WWW8 586 aa14.82□□□□□ -0.04
CLN6-219ENST00000637329 SELENOMQ8WWX9 145 aa14.82□□□□□ -0.04
CLN6-219ENST00000637329 METTL2AQ96IZ6 378 aaKnown RBP14.82□□□□□ -0.04
CLN6-219ENST00000637329 BRINP2Q9C0B6 783 aa14.82□□□□□ -0.04
CLN6-219ENST00000637329 MIR1-1HGQ9H1L0 117 aa14.82□□□□□ -0.04
CLN6-219ENST00000637329 AIG1Q9NVV5 245 aa14.82□□□□□ -0.04
CLN6-219ENST00000637329 OR6C2Q9NZP2 312 aa14.82□□□□□ -0.04
CLN6-219ENST00000637329 CCL27Q9Y4X3 112 aa14.82□□□□□ -0.04
CLN6-219ENST00000637329 ANKRD12Q6UB98 2062 aa14.81□□□□□ -0.04
CLN6-219ENST00000637329 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.81□□□□□ -0.04
CLN6-219ENST00000637329 A0A1W2PPV9 198 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms