RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 HEXDCQ8WVB3 486 aa17.44■□□□□ 0.38
CACNA1A-227ENST00000636549 SOX30O94993 753 aa17.44■□□□□ 0.38
CACNA1A-227ENST00000636549 S100A2P29034 98 aa17.44■□□□□ 0.38
CACNA1A-227ENST00000636549 LEPRP48357 1165 aaKnown RBP17.44■□□□□ 0.38
CACNA1A-227ENST00000636549 NIPA1Q7RTP0 329 aa17.44■□□□□ 0.38
CACNA1A-227ENST00000636549 HAO2Q9NYQ3 351 aa17.44■□□□□ 0.38
CACNA1A-227ENST00000636549 DNAJA1P31689 397 aaKnown RBP17.44■□□□□ 0.38
CACNA1A-227ENST00000636549 CDH15P55291 814 aa17.44■□□□□ 0.38
CACNA1A-227ENST00000636549 NET1Q7Z628 596 aaPredicted RBP17.44■□□□□ 0.38
CACNA1A-227ENST00000636549 MFSD2AQ8NA29 543 aa17.44■□□□□ 0.38
CACNA1A-227ENST00000636549 CASTOR1Q8WTX7 329 aa17.44■□□□□ 0.38
CACNA1A-227ENST00000636549 LRRIQ1Q96JM4 1722 aa17.44■□□□□ 0.38
CACNA1A-227ENST00000636549 NKX2-4Q9H2Z4 354 aa17.44■□□□□ 0.38
CACNA1A-227ENST00000636549 PCDHB1Q9Y5F3 818 aa17.44■□□□□ 0.38
CACNA1A-227ENST00000636549 MEIS2O14770 477 aa17.43■□□□□ 0.38
CACNA1A-227ENST00000636549 DHFRP00374 187 aa17.43■□□□□ 0.38
CACNA1A-227ENST00000636549 TTMPQ5BVD1 217 aa17.43■□□□□ 0.38
CACNA1A-227ENST00000636549 PIWIL4Q7Z3Z4 852 aaKnown RBP17.43■□□□□ 0.38
CACNA1A-227ENST00000636549 OR52E4Q8NGH9 312 aa17.43■□□□□ 0.38
CACNA1A-227ENST00000636549 GPATCH1Q9BRR8 931 aaKnown RBP17.43■□□□□ 0.38
CACNA1A-227ENST00000636549 NUAK1O60285 661 aa17.43■□□□□ 0.38
CACNA1A-227ENST00000636549 BMP1P13497 986 aa17.43■□□□□ 0.38
CACNA1A-227ENST00000636549 VAMP1P23763 118 aa17.43■□□□□ 0.38
CACNA1A-227ENST00000636549 PPP1R8Q12972 351 aaKnown RBP17.43■□□□□ 0.38
CACNA1A-227ENST00000636549 TMEM192Q8IY95 271 aa17.43■□□□□ 0.38
CACNA1A-227ENST00000636549 DQX1Q8TE96 717 aaKnown RBP17.43■□□□□ 0.38
CACNA1A-227ENST00000636549 TCF12Q99081 682 aa17.43■□□□□ 0.38
CACNA1A-227ENST00000636549 ZNF670Q9BS34 389 aa17.43■□□□□ 0.38
CACNA1A-227ENST00000636549 TLR9Q9NR96 1032 aa17.43■□□□□ 0.38
CACNA1A-227ENST00000636549 GSTT1P30711 240 aa17.43■□□□□ 0.38
CACNA1A-227ENST00000636549 STK32AQ8WU08 396 aa17.43■□□□□ 0.38
CACNA1A-227ENST00000636549 RFT1Q96AA3 541 aa17.43■□□□□ 0.38
CACNA1A-227ENST00000636549 SLC35A5Q9BS91 424 aa17.43■□□□□ 0.38
CACNA1A-227ENST00000636549 FANCFQ9NPI8 374 aa17.43■□□□□ 0.38
CACNA1A-227ENST00000636549 WASF3Q9UPY6 502 aa17.43■□□□□ 0.38
CACNA1A-227ENST00000636549 WNT9AO14904 365 aa17.43■□□□□ 0.38
CACNA1A-227ENST00000636549 LRTOMTQ8WZ04 291 aa17.43■□□□□ 0.38
CACNA1A-227ENST00000636549 GPR34Q9UPC5 381 aa17.43■□□□□ 0.38
CACNA1A-227ENST00000636549 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.43■□□□□ 0.38
CACNA1A-227ENST00000636549 SPARCP09486 303 aa17.43■□□□□ 0.38
CACNA1A-227ENST00000636549 ZNF35P13682 527 aa17.43■□□□□ 0.38
CACNA1A-227ENST00000636549 BRMS1LQ5PSV4 323 aa17.43■□□□□ 0.38
CACNA1A-227ENST00000636549 NT5DC1Q5TFE4 455 aa17.43■□□□□ 0.38
CACNA1A-227ENST00000636549 BBS12Q6ZW61 710 aa17.43■□□□□ 0.38
CACNA1A-227ENST00000636549 SPATA19Q7Z5L4 167 aa17.43■□□□□ 0.38
CACNA1A-227ENST00000636549 S100PBPQ96BU1 408 aa17.43■□□□□ 0.38
CACNA1A-227ENST00000636549 NSMCE3Q96MG7 304 aa17.43■□□□□ 0.38
CACNA1A-227ENST00000636549 IL4I1Q96RQ9 567 aa17.43■□□□□ 0.38
CACNA1A-227ENST00000636549 SP140LQ9H930 580 aa17.43■□□□□ 0.38
CACNA1A-227ENST00000636549 TREM1Q9NP99 234 aa17.43■□□□□ 0.38
CACNA1A-227ENST00000636549 ZNF701Q9NV72 531 aaPredicted RBP17.43■□□□□ 0.38
CACNA1A-227ENST00000636549 BCORL1Q5H9F3 1711 aa17.42■□□□□ 0.38
CACNA1A-227ENST00000636549 SHOXO15266 292 aa17.42■□□□□ 0.38
CACNA1A-227ENST00000636549 PTDSS1P48651 473 aaKnown RBP17.42■□□□□ 0.38
CACNA1A-227ENST00000636549 CTBP2P56545 445 aa17.42■□□□□ 0.38
CACNA1A-227ENST00000636549 HEPACAMQ14CZ8 416 aa17.42■□□□□ 0.38
CACNA1A-227ENST00000636549 TCAIMQ8N3R3 496 aa17.42■□□□□ 0.38
CACNA1A-227ENST00000636549 TMEM121BQ9BXQ6 578 aaPredicted RBP17.42■□□□□ 0.38
CACNA1A-227ENST00000636549 FASTKD3Q14CZ7 662 aaKnown RBP17.42■□□□□ 0.38
CACNA1A-227ENST00000636549 VHLLQ6RSH7 139 aa17.42■□□□□ 0.38
CACNA1A-227ENST00000636549 PTCH2Q9Y6C5 1203 aa17.42■□□□□ 0.38
CACNA1A-227ENST00000636549 SNAP91O60641 907 aa17.42■□□□□ 0.38
CACNA1A-227ENST00000636549 PRAMEF12O95522 483 aa17.42■□□□□ 0.38
CACNA1A-227ENST00000636549 SLC1A2P43004 574 aa17.42■□□□□ 0.38
CACNA1A-227ENST00000636549 FXYD6P3P58550 94 aa17.42■□□□□ 0.38
CACNA1A-227ENST00000636549 ZACNQ401N2 412 aa17.42■□□□□ 0.38
CACNA1A-227ENST00000636549 CMTM8Q8IZV2 173 aa17.42■□□□□ 0.38
CACNA1A-227ENST00000636549 FRS2Q8WU20 508 aa17.42■□□□□ 0.38
CACNA1A-227ENST00000636549 CYP3A7-CYP3A51PA0A087WV96 503 aa17.42■□□□□ 0.38
CACNA1A-227ENST00000636549 SOX14O95416 240 aa17.42■□□□□ 0.38
CACNA1A-227ENST00000636549 CYP3A7P24462 503 aa17.42■□□□□ 0.38
CACNA1A-227ENST00000636549 ATXN7L3Q14CW9 347 aaPredicted RBP17.42■□□□□ 0.38
CACNA1A-227ENST00000636549 FAM174BQ3ZCQ3 159 aa17.42■□□□□ 0.38
CACNA1A-227ENST00000636549 PDSS1Q5T2R2 415 aa17.42■□□□□ 0.38
CACNA1A-227ENST00000636549 GBA3Q9H227 469 aa17.42■□□□□ 0.38
CACNA1A-227ENST00000636549 NDST3O95803 873 aa17.42■□□□□ 0.38
CACNA1A-227ENST00000636549 PDCD4Q53EL6 469 aaKnown RBP17.42■□□□□ 0.38
CACNA1A-227ENST00000636549 SPRYD7Q5W111 196 aa17.42■□□□□ 0.38
CACNA1A-227ENST00000636549 SHISA6Q6ZSJ9 500 aa17.42■□□□□ 0.38
CACNA1A-227ENST00000636549 ZNF283Q8N7M2 679 aa17.42■□□□□ 0.38
CACNA1A-227ENST00000636549 TEX13DA0A0J9YY54 714 aaPredicted RBP17.42■□□□□ 0.38
CACNA1A-227ENST00000636549 GLTPD2A6NH11 291 aa17.42■□□□□ 0.38
CACNA1A-227ENST00000636549 PLK4O00444 970 aa17.42■□□□□ 0.38
CACNA1A-227ENST00000636549 BDH1Q02338 343 aa17.42■□□□□ 0.38
CACNA1A-227ENST00000636549 USF2Q15853 346 aaPredicted RBP17.42■□□□□ 0.38
CACNA1A-227ENST00000636549 DUSP28Q4G0W2 176 aa17.42■□□□□ 0.38
CACNA1A-227ENST00000636549 C3orf33Q6P1S2 294 aa17.42■□□□□ 0.38
CACNA1A-227ENST00000636549 DENND2DQ9H6A0 471 aaPredicted RBP17.42■□□□□ 0.38
CACNA1A-227ENST00000636549 GRHPRQ9UBQ7 328 aa17.42■□□□□ 0.38
CACNA1A-227ENST00000636549 AP3M1Q9Y2T2 418 aa17.42■□□□□ 0.38
CACNA1A-227ENST00000636549 CLDN7O95471 211 aa17.41■□□□□ 0.38
CACNA1A-227ENST00000636549 ZNF267Q14586 743 aaPredicted RBP17.41■□□□□ 0.38
CACNA1A-227ENST00000636549 NFKBIDQ8NI38 313 aa17.41■□□□□ 0.38
CACNA1A-227ENST00000636549 C1orf21Q9H246 121 aa17.41■□□□□ 0.38
CACNA1A-227ENST00000636549 CUEDC1Q9NWM3 386 aaPredicted RBP17.41■□□□□ 0.38
CACNA1A-227ENST00000636549 NDUFA13Q9P0J0 144 aa17.41■□□□□ 0.38
CACNA1A-227ENST00000636549 IQGAP3Q86VI3 1631 aa17.41■□□□□ 0.38
CACNA1A-227ENST00000636549 MDFIC2A0A1B0GVS7 189 aa17.41■□□□□ 0.38
CACNA1A-227ENST00000636549 DIRAS1O95057 198 aa17.41■□□□□ 0.38
CACNA1A-227ENST00000636549 RLN2P04090 185 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms