RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 CSNK2A2P19784 350 aaPredicted RBP5.43□□□□□ -1.54
SCN1A-209ENST00000635750 XKP51811 444 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 CDH12P55289 794 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 SLC25A3Q00325 362 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 E2F1Q01094 437 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 GRK1Q15835 563 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 PKDCCQ504Y2 493 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 TEX44Q53QW1 395 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 SPIN4Q56A73 249 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 BBS12Q6ZW61 710 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 SLC26A9Q7LBE3 791 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 ARL14EPQ8N8R7 260 aaPredicted RBP5.43□□□□□ -1.54
SCN1A-209ENST00000635750 GALNT11Q8NCW6 608 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 GRPEL2Q8TAA5 225 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 SPRYD4Q8WW59 207 aaPredicted RBP5.43□□□□□ -1.54
SCN1A-209ENST00000635750 HTRA1Q92743 480 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 BORCS5Q969J3 196 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 PIWIL1Q96J94 861 aaKnown RBP5.43□□□□□ -1.54
SCN1A-209ENST00000635750 TREM1Q9NP99 234 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 ITM2CQ9NQX7 267 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 SLC38A8A6NNN8 435 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 YDJCA8MPS7 323 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 SCAMP1O15126 338 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 SHOXO15266 292 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 LDB2O43679 373 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 GPR37L1O60883 481 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 HOXB2P14652 356 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 CYP3A5P20815 502 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 GRIA2P42262 883 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 SSTP61278 116 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 GBX1Q14549 363 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 FAM110CQ1W6H9 321 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 TIGD5Q53EQ6 642 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 USP43Q70EL4 1123 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 RALGPS2Q86X27 583 aaPredicted RBP5.43□□□□□ -1.54
SCN1A-209ENST00000635750 CLIP4Q8N3C7 705 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 GLB1L3Q8NCI6 653 aaPredicted RBP5.43□□□□□ -1.54
SCN1A-209ENST00000635750 MAFIPQ8WZ33 124 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 GPR21Q99679 349 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 MRPL45Q9BRJ2 306 aaKnown RBP5.43□□□□□ -1.54
SCN1A-209ENST00000635750 ANKRA2Q9H9E1 313 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 PADI3Q9ULW8 664 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 FARSAQ9Y285 508 aaKnown RBP5.43□□□□□ -1.54
SCN1A-209ENST00000635750 PCDHGB6Q9Y5F9 930 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 PCDHGA10Q9Y5H3 936 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 AP1M2Q9Y6Q5 423 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 LOC102723532A0A0G2JNH3 316 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 ANKRD33BA6NCL7 494 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 PPM1BO75688 479 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 ABHD2P08910 425 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 ZBTB48P10074 688 aaPredicted RBP5.43□□□□□ -1.54
SCN1A-209ENST00000635750 PSKH1P11801 424 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 TUBG1P23258 451 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 PTGER3P43115 390 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 BRCC3P46736 316 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 FASLGP48023 281 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 SEPHS1P49903 392 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 SLC26A5P58743 744 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 DLG4P78352 724 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 TLE3Q04726 772 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 TIGD6Q17RP2 521 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 AARDQ4LEZ3 155 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 TIGD2Q4W5G0 525 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 MTX3Q5HYI7 312 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 RBM48Q5RL73 367 aaKnown RBP5.43□□□□□ -1.54
SCN1A-209ENST00000635750 TPGS2Q68CL5 300 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 FCGR1BQ92637 280 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 IRF7Q92985 503 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 GIMAP5Q96F15 307 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 COPS4Q9BT78 406 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 ACTL8Q9H568 366 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 TMEM184CQ9NVA4 438 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 TELO2Q9Y4R8 837 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 CPQQ9Y646 472 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 USP31Q70CQ4 1352 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 C13orf42A0A1B0GVH6 325 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 HSBP1L1C9JCN9 74 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 IFNA1P01562 189 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 ITGB1P05556 798 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 SRPRAP08240 638 aaKnown RBP5.43□□□□□ -1.54
SCN1A-209ENST00000635750 MSL3P1P0C860 447 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 RAB4AP20338 218 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 GLDCP23378 1020 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 ICAM3P32942 547 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 SHMT1P34896 483 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 CDH15P55291 814 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 HSD11B2P80365 405 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 DEFA5Q01523 94 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 BCL2A1Q16548 175 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 ZACNQ401N2 412 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 CRB2Q5IJ48 1285 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 PITRM1Q5JRX3 1037 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 SWT1Q5T5J6 900 aaKnown RBP5.43□□□□□ -1.54
SCN1A-209ENST00000635750 AHSA2Q719I0 299 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 ZNF572Q7Z3I7 529 aaPredicted RBP5.43□□□□□ -1.54
SCN1A-209ENST00000635750 RASGEF1CQ8N431 466 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 STOML3Q8TAV4 291 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 TRIB2Q92519 343 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 TRIM43Q96BQ3 446 aaPredicted RBP5.43□□□□□ -1.54
SCN1A-209ENST00000635750 TREX2Q9BQ50 279 aaPredicted RBP5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms