RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 TOR1BO14657 336 aa15.83■□□□□ 0.13
LDB3-208ENST00000623007 HNRNPRO43390 633 aaKnown RBP15.83■□□□□ 0.13
LDB3-208ENST00000623007 C1GALT1C1LP0DN25 315 aa15.83■□□□□ 0.13
LDB3-208ENST00000623007 ERGP11308 486 aa15.83■□□□□ 0.13
LDB3-208ENST00000623007 DDX5P17844 614 aaKnown RBP15.83■□□□□ 0.13
LDB3-208ENST00000623007 S100A3P33764 101 aa15.83■□□□□ 0.13
LDB3-208ENST00000623007 LTBRP36941 435 aa15.83■□□□□ 0.13
LDB3-208ENST00000623007 PIK3CBP42338 1070 aa15.83■□□□□ 0.13
LDB3-208ENST00000623007 WASP42768 502 aa15.83■□□□□ 0.13
LDB3-208ENST00000623007 NFE2L1Q14494 772 aa15.83■□□□□ 0.13
LDB3-208ENST00000623007 TRIP10Q15642 601 aa15.83■□□□□ 0.13
LDB3-208ENST00000623007 CYP2A13Q16696 494 aa15.83■□□□□ 0.13
LDB3-208ENST00000623007 PAGE3Q5JUK9 113 aa15.83■□□□□ 0.13
LDB3-208ENST00000623007 C6orf10Q5SRN2 563 aa15.83■□□□□ 0.13
LDB3-208ENST00000623007 NANOGP8Q6NSW7 305 aa15.83■□□□□ 0.13
LDB3-208ENST00000623007 NOXRED1Q6NXP6 359 aa15.83■□□□□ 0.13
LDB3-208ENST00000623007 TLDC1Q6P9B6 456 aa15.83■□□□□ 0.13
LDB3-208ENST00000623007 SLCO4C1Q6ZQN7 724 aa15.83■□□□□ 0.13
LDB3-208ENST00000623007 LAS2Q8IYD9 372 aa15.83■□□□□ 0.13
LDB3-208ENST00000623007 IL17RCQ8NAC3 791 aa15.83■□□□□ 0.13
LDB3-208ENST00000623007 PLA2G15Q8NCC3 412 aa15.83■□□□□ 0.13
LDB3-208ENST00000623007 OR14C36Q8NHC7 312 aa15.83■□□□□ 0.13
LDB3-208ENST00000623007 ZDHHC5Q9C0B5 715 aa15.83■□□□□ 0.13
LDB3-208ENST00000623007 KCNH6Q9H252 994 aa15.83■□□□□ 0.13
LDB3-208ENST00000623007 NANOGQ9H9S0 305 aa15.83■□□□□ 0.13
LDB3-208ENST00000623007 IL1RL2Q9HB29 575 aa15.83■□□□□ 0.13
LDB3-208ENST00000623007 CMTM6Q9NX76 183 aa15.83■□□□□ 0.13
LDB3-208ENST00000623007 MAN2B2Q9Y2E5 1009 aa15.83■□□□□ 0.13
LDB3-208ENST00000623007 MTCH2Q9Y6C9 303 aa15.83■□□□□ 0.13
LDB3-208ENST00000623007 PIAS3Q9Y6X2 628 aa15.83■□□□□ 0.13
LDB3-208ENST00000623007 ASPDHA6ND91 283 aa15.83■□□□□ 0.12
LDB3-208ENST00000623007 ACADMP11310 421 aa15.83■□□□□ 0.12
LDB3-208ENST00000623007 SOX9P48436 509 aa15.83■□□□□ 0.12
LDB3-208ENST00000623007 CLCN2P51788 898 aa15.83■□□□□ 0.12
LDB3-208ENST00000623007 ADPRHP54922 357 aa15.83■□□□□ 0.12
LDB3-208ENST00000623007 SEC13P55735 322 aa15.83■□□□□ 0.12
LDB3-208ENST00000623007 TAP2Q03519 686 aa15.83■□□□□ 0.12
LDB3-208ENST00000623007 PTGR1Q14914 329 aa15.83■□□□□ 0.12
LDB3-208ENST00000623007 IRF4Q15306 451 aa15.83■□□□□ 0.12
LDB3-208ENST00000623007 FAM174BQ3ZCQ3 159 aa15.83■□□□□ 0.12
LDB3-208ENST00000623007 IRGCQ6NXR0 463 aa15.83■□□□□ 0.12
LDB3-208ENST00000623007 GPR180Q86V85 440 aa15.83■□□□□ 0.12
LDB3-208ENST00000623007 TMEM132CQ8N3T6 1108 aa15.83■□□□□ 0.12
LDB3-208ENST00000623007 LILRA3Q8N6C8 439 aaPredicted RBP15.83■□□□□ 0.12
LDB3-208ENST00000623007 ICA1LQ8NDH6 482 aa15.83■□□□□ 0.12
LDB3-208ENST00000623007 VPS37AQ8NEZ2 397 aa15.83■□□□□ 0.12
LDB3-208ENST00000623007 DNAJB14Q8TBM8 379 aa15.83■□□□□ 0.12
LDB3-208ENST00000623007 SLC5A11Q8WWX8 675 aa15.83■□□□□ 0.12
LDB3-208ENST00000623007 FOXJ1Q92949 421 aa15.83■□□□□ 0.12
LDB3-208ENST00000623007 SIPA1Q96FS4 1042 aa15.83■□□□□ 0.12
LDB3-208ENST00000623007 OR4K3Q96R72 315 aa15.83■□□□□ 0.12
LDB3-208ENST00000623007 OR52E6Q96RD3 313 aa15.83■□□□□ 0.12
LDB3-208ENST00000623007 NR1H4Q96RI1 486 aaPredicted RBP15.83■□□□□ 0.12
LDB3-208ENST00000623007 UHRF1Q96T88 793 aaPredicted RBP15.83■□□□□ 0.12
LDB3-208ENST00000623007 SLC17A4Q9Y2C5 497 aa15.83■□□□□ 0.12
LDB3-208ENST00000623007 PCDHB3Q9Y5E6 796 aa15.83■□□□□ 0.12
LDB3-208ENST00000623007 RNGTTO60942 597 aaKnown RBP15.82■□□□□ 0.12
LDB3-208ENST00000623007 CAPNS1P04632 268 aa15.82■□□□□ 0.12
LDB3-208ENST00000623007 NPPBP16860 134 aa15.82■□□□□ 0.12
LDB3-208ENST00000623007 TRPC1P48995 793 aa15.82■□□□□ 0.12
LDB3-208ENST00000623007 LIPEQ05469 1076 aa15.82■□□□□ 0.12
LDB3-208ENST00000623007 AAK1Q2M2I8 961 aa15.82■□□□□ 0.12
LDB3-208ENST00000623007 C2orf27AQ580R0 203 aa15.82■□□□□ 0.12
LDB3-208ENST00000623007 HABP4Q5JVS0 413 aaKnown RBP15.82■□□□□ 0.12
LDB3-208ENST00000623007 PRAMEF14Q5SWL7 426 aa15.82■□□□□ 0.12
LDB3-208ENST00000623007 PRAMEF13Q5VWM6 474 aa15.82■□□□□ 0.12
LDB3-208ENST00000623007 IZUMO2Q6UXV1 221 aa15.82■□□□□ 0.12
LDB3-208ENST00000623007 DLEU7Q6UYE1 221 aa15.82■□□□□ 0.12
LDB3-208ENST00000623007 FKBP9P1Q75LS8 142 aa15.82■□□□□ 0.12
LDB3-208ENST00000623007 ST13P5Q8NFI4 369 aaPredicted RBP15.82■□□□□ 0.12
LDB3-208ENST00000623007 OR7G3Q8NG95 312 aa15.82■□□□□ 0.12
LDB3-208ENST00000623007 MTFMTQ96DP5 389 aaKnown RBP15.82■□□□□ 0.12
LDB3-208ENST00000623007 SLC45A3Q96JT2 553 aa15.82■□□□□ 0.12
LDB3-208ENST00000623007 CCDC115Q96NT0 180 aa15.82■□□□□ 0.12
LDB3-208ENST00000623007 YY1AP1Q9H869 796 aa15.82■□□□□ 0.12
LDB3-208ENST00000623007 PELI2Q9HAT8 420 aa15.82■□□□□ 0.12
LDB3-208ENST00000623007 CCM2LQ9NUG4 571 aaPredicted RBP15.82■□□□□ 0.12
LDB3-208ENST00000623007 FAM120CQ9NX05 1096 aaKnown RBP15.82■□□□□ 0.12
LDB3-208ENST00000623007 PACSIN3Q9UKS6 424 aa15.82■□□□□ 0.12
LDB3-208ENST00000623007 WBP11Q9Y2W2 641 aaKnown RBP15.82■□□□□ 0.12
LDB3-208ENST00000623007 HEBP2Q9Y5Z4 205 aa15.82■□□□□ 0.12
LDB3-208ENST00000623007 A0A096LPI6 279 aa15.81■□□□□ 0.12
LDB3-208ENST00000623007 A0A1W2PQU0 124 aa15.81■□□□□ 0.12
LDB3-208ENST00000623007 KLF8O95600 359 aaPredicted RBP15.81■□□□□ 0.12
LDB3-208ENST00000623007 PAK4O96013 591 aaPredicted RBP15.81■□□□□ 0.12
LDB3-208ENST00000623007 SDC1P18827 310 aa15.81■□□□□ 0.12
LDB3-208ENST00000623007 GSTM5P46439 218 aa15.81■□□□□ 0.12
LDB3-208ENST00000623007 GSK3BP49841 420 aa15.81■□□□□ 0.12
LDB3-208ENST00000623007 GTF2A1P52655 376 aaPredicted RBP15.81■□□□□ 0.12
LDB3-208ENST00000623007 MRPS35P82673 323 aaKnown RBP15.81■□□□□ 0.12
LDB3-208ENST00000623007 LRIF1Q5T3J3 769 aa15.81■□□□□ 0.12
LDB3-208ENST00000623007 GALNT18Q6P9A2 607 aa15.81■□□□□ 0.12
LDB3-208ENST00000623007 SLC2A7Q6PXP3 512 aa15.81■□□□□ 0.12
LDB3-208ENST00000623007 NXPE4Q6UWF7 544 aa15.81■□□□□ 0.12
LDB3-208ENST00000623007 TMPRSS11BQ86T26 416 aa15.81■□□□□ 0.12
LDB3-208ENST00000623007 PDSS2Q86YH6 399 aa15.81■□□□□ 0.12
LDB3-208ENST00000623007 SYT12Q8IV01 421 aa15.81■□□□□ 0.12
LDB3-208ENST00000623007 LRRC56Q8IYG6 542 aaPredicted RBP15.81■□□□□ 0.12
LDB3-208ENST00000623007 KIAA2013Q8IYS2 634 aa15.81■□□□□ 0.12
LDB3-208ENST00000623007 OR52E4Q8NGH9 312 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms