RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 ANXA6P08133 673 aa7.72□□□□□ -1.17
VPS11-209ENST00000622309 HPGDP15428 266 aa7.72□□□□□ -1.17
VPS11-209ENST00000622309 HTR1EP28566 365 aa7.72□□□□□ -1.17
VPS11-209ENST00000622309 KIR2DL3P43628 341 aa7.72□□□□□ -1.17
VPS11-209ENST00000622309 EPHA5P54756 1037 aa7.72□□□□□ -1.17
VPS11-209ENST00000622309 YBX1P67809 324 aaKnown RBP7.72□□□□□ -1.17
VPS11-209ENST00000622309 CYP4F8P98187 520 aa7.72□□□□□ -1.17
VPS11-209ENST00000622309 C17orf67Q0P5P2 114 aa7.72□□□□□ -1.17
VPS11-209ENST00000622309 EXOSC2Q13868 293 aaKnown RBP7.72□□□□□ -1.17
VPS11-209ENST00000622309 SMN1Q16637 294 aaKnown RBP7.72□□□□□ -1.17
VPS11-209ENST00000622309 MAP1SQ66K74 1059 aaPredicted RBP7.72□□□□□ -1.17
VPS11-209ENST00000622309 FAM183BPQ6ZVS7 135 aa7.72□□□□□ -1.17
VPS11-209ENST00000622309 ZSWIM9Q86XI8 627 aa7.72□□□□□ -1.17
VPS11-209ENST00000622309 ADHFE1Q8IWW8 467 aa7.72□□□□□ -1.17
VPS11-209ENST00000622309 CYP4Z2PQ8N1L4 340 aa7.72□□□□□ -1.17
VPS11-209ENST00000622309 STX19Q8N4C7 294 aa7.72□□□□□ -1.17
VPS11-209ENST00000622309 ATG16L2Q8NAA4 619 aa7.72□□□□□ -1.17
VPS11-209ENST00000622309 SLC37A3Q8NCC5 494 aa7.72□□□□□ -1.17
VPS11-209ENST00000622309 NLGN4YQ8NFZ3 816 aaPredicted RBP7.72□□□□□ -1.17
VPS11-209ENST00000622309 FBXO30Q8TB52 745 aa7.72□□□□□ -1.17
VPS11-209ENST00000622309 ARNTL2Q8WYA1 636 aa7.72□□□□□ -1.17
VPS11-209ENST00000622309 ZNF516Q92618 1163 aa7.72□□□□□ -1.17
VPS11-209ENST00000622309 FOXJ1Q92949 421 aa7.72□□□□□ -1.17
VPS11-209ENST00000622309 TEX12Q9BXU0 123 aa7.72□□□□□ -1.17
VPS11-209ENST00000622309 WDR11Q9BZH6 1224 aa7.72□□□□□ -1.17
VPS11-209ENST00000622309 BCL2L14Q9BZR8 327 aa7.72□□□□□ -1.17
VPS11-209ENST00000622309 SLC19A3Q9BZV2 496 aa7.72□□□□□ -1.17
VPS11-209ENST00000622309 C3orf14Q9HBI5 128 aa7.72□□□□□ -1.17
VPS11-209ENST00000622309 MRM3Q9HC36 420 aaKnown RBP7.72□□□□□ -1.17
VPS11-209ENST00000622309 RASSF1Q9NS23 344 aa7.72□□□□□ -1.17
VPS11-209ENST00000622309 ACTR10Q9NZ32 417 aa7.72□□□□□ -1.17
VPS11-209ENST00000622309 LTBP1Q14766 1721 aa7.72□□□□□ -1.17
VPS11-209ENST00000622309 THSD7BQ9C0I4 1608 aa7.72□□□□□ -1.17
VPS11-209ENST00000622309 A0A1W2PP18 115 aa7.72□□□□□ -1.17
VPS11-209ENST00000622309 hCG_1807616A0A1W2PRN6 198 aa7.72□□□□□ -1.17
VPS11-209ENST00000622309 SERTM1A2A2V5 107 aa7.72□□□□□ -1.17
VPS11-209ENST00000622309 H7C2Y5 167 aa7.72□□□□□ -1.17
VPS11-209ENST00000622309 GSTA4O15217 222 aa7.72□□□□□ -1.17
VPS11-209ENST00000622309 FABP7O15540 132 aa7.72□□□□□ -1.17
VPS11-209ENST00000622309 KIAA0513O60268 411 aa7.72□□□□□ -1.17
VPS11-209ENST00000622309 HOXD8P13378 290 aaPredicted RBP7.72□□□□□ -1.17
VPS11-209ENST00000622309 DARSP14868 501 aaKnown RBP7.72□□□□□ -1.17
VPS11-209ENST00000622309 HRH2P25021 359 aa7.72□□□□□ -1.17
VPS11-209ENST00000622309 ACSL1P33121 698 aa7.72□□□□□ -1.17
VPS11-209ENST00000622309 NRIP1P48552 1158 aa7.72□□□□□ -1.17
VPS11-209ENST00000622309 KPNA2P52292 529 aaKnown RBP7.72□□□□□ -1.17
VPS11-209ENST00000622309 HOXC5Q00444 222 aa7.72□□□□□ -1.17
VPS11-209ENST00000622309 ADAM15Q13444 863 aa7.72□□□□□ -1.17
VPS11-209ENST00000622309 MRPL58Q14197 206 aaKnown RBP7.72□□□□□ -1.17
VPS11-209ENST00000622309 FAM102BQ5T8I3 360 aa7.72□□□□□ -1.17
VPS11-209ENST00000622309 TRILQ7L0X0 811 aa7.72□□□□□ -1.17
VPS11-209ENST00000622309 LRRC8DQ7L1W4 858 aa7.72□□□□□ -1.17
VPS11-209ENST00000622309 SLC46A3Q7Z3Q1 461 aa7.72□□□□□ -1.17
VPS11-209ENST00000622309 GALNT10Q86SR1 603 aa7.72□□□□□ -1.17
VPS11-209ENST00000622309 STX12Q86Y82 276 aa7.72□□□□□ -1.17
VPS11-209ENST00000622309 RBFAQ8N0V3 343 aa7.72□□□□□ -1.17
VPS11-209ENST00000622309 SPATA6LQ8N4H0 392 aa7.72□□□□□ -1.17
VPS11-209ENST00000622309 OR5K1Q8NHB7 308 aa7.72□□□□□ -1.17
VPS11-209ENST00000622309 GPR151Q8TDV0 419 aa7.72□□□□□ -1.17
VPS11-209ENST00000622309 CA5BP1Q8WTZ4 195 aa7.72□□□□□ -1.17
VPS11-209ENST00000622309 DCAF4Q8WV16 495 aa7.72□□□□□ -1.17
VPS11-209ENST00000622309 COPS5Q92905 334 aa7.72□□□□□ -1.17
VPS11-209ENST00000622309 MYDGFQ969H8 173 aa7.72□□□□□ -1.17
VPS11-209ENST00000622309 C18orf25Q96B23 403 aaPredicted RBP7.72□□□□□ -1.17
VPS11-209ENST00000622309 MTERF3Q96E29 417 aa7.72□□□□□ -1.17
VPS11-209ENST00000622309 C19orf60Q96EN9 201 aa7.72□□□□□ -1.17
VPS11-209ENST00000622309 UCN2Q96RP3 112 aa7.72□□□□□ -1.17
VPS11-209ENST00000622309 DNAJC11Q9NVH1 559 aa7.72□□□□□ -1.17
VPS11-209ENST00000622309 MBD2Q9UBB5 411 aa7.72□□□□□ -1.17
VPS11-209ENST00000622309 AGO1Q9UL18 857 aaKnown RBP7.72□□□□□ -1.17
VPS11-209ENST00000622309 LRRC37AA6NMS7 1700 aa7.72□□□□□ -1.17
VPS11-209ENST00000622309 A0A0A6YYJ9 748 aa7.71□□□□□ -1.17
VPS11-209ENST00000622309 FAM240BA0A1B0GVZ2 78 aa7.71□□□□□ -1.17
VPS11-209ENST00000622309 MROH6A6NGR9 719 aa7.71□□□□□ -1.17
VPS11-209ENST00000622309 KRBOX1C9JBD0 128 aa7.71□□□□□ -1.17
VPS11-209ENST00000622309 HNRNPDLO14979 420 aaKnown RBP7.71□□□□□ -1.17
VPS11-209ENST00000622309 GATCO43716 136 aaKnown RBP7.71□□□□□ -1.17
VPS11-209ENST00000622309 PSMD10O75832 226 aa7.71□□□□□ -1.17
VPS11-209ENST00000622309 ACSM4P0C7M7 580 aa7.71□□□□□ -1.17
VPS11-209ENST00000622309 ATP5F1P24539 256 aaPredicted RBP7.71□□□□□ -1.17
VPS11-209ENST00000622309 IGFBP5P24593 272 aa7.71□□□□□ -1.17
VPS11-209ENST00000622309 HLA-FP30511 346 aa7.71□□□□□ -1.17
VPS11-209ENST00000622309 PGGT1BP53609 377 aa7.71□□□□□ -1.17
VPS11-209ENST00000622309 HUNKP57058 714 aa7.71□□□□□ -1.17
VPS11-209ENST00000622309 OR4D2P58180 307 aa7.71□□□□□ -1.17
VPS11-209ENST00000622309 CDO1Q16878 200 aa7.71□□□□□ -1.17
VPS11-209ENST00000622309 TDRD10Q5VZ19 366 aaKnown RBP7.71□□□□□ -1.17
VPS11-209ENST00000622309 CLEC6AQ6EIG7 209 aa7.71□□□□□ -1.17
VPS11-209ENST00000622309 MZT2BQ6NZ67 158 aa7.71□□□□□ -1.17
VPS11-209ENST00000622309 TMEM151AQ8N4L1 468 aa7.71□□□□□ -1.17
VPS11-209ENST00000622309 CDYL2Q8N8U2 506 aa7.71□□□□□ -1.17
VPS11-209ENST00000622309 C3orf58Q8NDZ4 430 aa7.71□□□□□ -1.17
VPS11-209ENST00000622309 MYLPFQ96A32 169 aa7.71□□□□□ -1.17
VPS11-209ENST00000622309 PDLIM5Q96HC4 596 aaKnown RBP7.71□□□□□ -1.17
VPS11-209ENST00000622309 MRPL57Q9BQC6 102 aaKnown RBP7.71□□□□□ -1.17
VPS11-209ENST00000622309 COPS4Q9BT78 406 aa7.71□□□□□ -1.17
VPS11-209ENST00000622309 APOBEC3GQ9HC16 384 aaKnown RBP7.71□□□□□ -1.17
VPS11-209ENST00000622309 NSMCE4AQ9NXX6 385 aa7.71□□□□□ -1.17
VPS11-209ENST00000622309 ZNF70Q9UC06 446 aaPredicted RBP7.71□□□□□ -1.17
VPS11-209ENST00000622309 ZMIZ1Q9ULJ6 1067 aa7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms