RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 ING2Q9H160 280 aa17.22■□□□□ 0.35
SCAMP4-213ENST00000621748 IFT80Q9P2H3 777 aaPredicted RBP17.22■□□□□ 0.35
SCAMP4-213ENST00000621748 KLK4Q9Y5K2 254 aa17.22■□□□□ 0.35
SCAMP4-213ENST00000621748 SPENQ96T58 3664 aaKnown RBP17.22■□□□□ 0.35
SCAMP4-213ENST00000621748 MYO18BQ8IUG5 2567 aa17.22■□□□□ 0.35
SCAMP4-213ENST00000621748 MDC1Q14676 2089 aaKnown RBP17.21■□□□□ 0.35
SCAMP4-213ENST00000621748 CNOT3O75175 753 aaKnown RBP17.21■□□□□ 0.35
SCAMP4-213ENST00000621748 WISP1O95388 367 aa17.21■□□□□ 0.35
SCAMP4-213ENST00000621748 ITGAXP20702 1163 aa17.21■□□□□ 0.35
SCAMP4-213ENST00000621748 GABRB3P28472 473 aa17.21■□□□□ 0.35
SCAMP4-213ENST00000621748 CCL11P51671 97 aa17.21■□□□□ 0.35
SCAMP4-213ENST00000621748 FOXL2P58012 376 aa17.21■□□□□ 0.35
SCAMP4-213ENST00000621748 TLE1Q04724 770 aa17.21■□□□□ 0.35
SCAMP4-213ENST00000621748 BBS9Q3SYG4 887 aa17.21■□□□□ 0.35
SCAMP4-213ENST00000621748 SUSD1Q6UWL2 747 aa17.21■□□□□ 0.35
SCAMP4-213ENST00000621748 TTLL10Q6ZVT0 673 aa17.21■□□□□ 0.35
SCAMP4-213ENST00000621748 ASB18Q6ZVZ8 466 aa17.21■□□□□ 0.35
SCAMP4-213ENST00000621748 C2CD4AQ8NCU7 369 aaPredicted RBP17.21■□□□□ 0.35
SCAMP4-213ENST00000621748 GABPB2Q8TAK5 448 aaPredicted RBP17.21■□□□□ 0.35
SCAMP4-213ENST00000621748 CD200R1Q8TD46 325 aa17.21■□□□□ 0.35
SCAMP4-213ENST00000621748 ASB11Q8WXH4 323 aa17.21■□□□□ 0.35
SCAMP4-213ENST00000621748 INPP5DQ92835 1189 aa17.21■□□□□ 0.35
SCAMP4-213ENST00000621748 PWWP2AQ96N64 755 aa17.21■□□□□ 0.35
SCAMP4-213ENST00000621748 ZNF285Q96NJ3 590 aa17.21■□□□□ 0.35
SCAMP4-213ENST00000621748 C17orf62Q9BQA9 187 aa17.21■□□□□ 0.35
SCAMP4-213ENST00000621748 FAM167BQ9BTA0 163 aa17.21■□□□□ 0.35
SCAMP4-213ENST00000621748 NAT9Q9BTE0 207 aa17.21■□□□□ 0.35
SCAMP4-213ENST00000621748 AARSD1Q9BTE6 412 aaKnown RBP17.21■□□□□ 0.35
SCAMP4-213ENST00000621748 ACAT2Q9BWD1 397 aa17.21■□□□□ 0.35
SCAMP4-213ENST00000621748 EPN3Q9H201 632 aa17.21■□□□□ 0.35
SCAMP4-213ENST00000621748 PLAC1Q9HBJ0 212 aa17.21■□□□□ 0.35
SCAMP4-213ENST00000621748 ACSS2Q9NR19 701 aa17.21■□□□□ 0.35
SCAMP4-213ENST00000621748 SLC22A11Q9NSA0 550 aa17.21■□□□□ 0.35
SCAMP4-213ENST00000621748 ANAPC2Q9UJX6 822 aa17.21■□□□□ 0.35
SCAMP4-213ENST00000621748 PADI2Q9Y2J8 665 aa17.21■□□□□ 0.35
SCAMP4-213ENST00000621748 COMMD10Q9Y6G5 202 aa17.21■□□□□ 0.35
SCAMP4-213ENST00000621748 ESYT3A0FGR9 886 aa17.2■□□□□ 0.34
SCAMP4-213ENST00000621748 CATP04040 527 aaKnown RBP17.2■□□□□ 0.34
SCAMP4-213ENST00000621748 MPC1LP0DKB6 136 aa17.2■□□□□ 0.34
SCAMP4-213ENST00000621748 CASRP41180 1078 aa17.2■□□□□ 0.34
SCAMP4-213ENST00000621748 TIAL1Q01085 375 aaKnown RBP eCLIP17.2■□□□□ 0.34
SCAMP4-213ENST00000621748 SPANXN3Q5MJ09 141 aa17.2■□□□□ 0.34
SCAMP4-213ENST00000621748 HP1BP3Q5SSJ5 553 aaPredicted RBP17.2■□□□□ 0.34
SCAMP4-213ENST00000621748 FRMPD2BQ6IN97 320 aa17.2■□□□□ 0.34
SCAMP4-213ENST00000621748 MRPL14Q6P1L8 145 aaKnown RBP17.2■□□□□ 0.34
SCAMP4-213ENST00000621748 CCDC25Q86WR0 208 aa17.2■□□□□ 0.34
SCAMP4-213ENST00000621748 CPNE9Q8IYJ1 553 aa17.2■□□□□ 0.34
SCAMP4-213ENST00000621748 SMPDL3AQ92484 453 aa17.2■□□□□ 0.34
SCAMP4-213ENST00000621748 LRRC39Q96DD0 335 aa17.2■□□□□ 0.34
SCAMP4-213ENST00000621748 SELENOSQ9BQE4 189 aa17.2■□□□□ 0.34
SCAMP4-213ENST00000621748 ENAMQ9NRM1 1142 aa17.2■□□□□ 0.34
SCAMP4-213ENST00000621748 GPN3Q9UHW5 284 aaPredicted RBP17.2■□□□□ 0.34
SCAMP4-213ENST00000621748 PTRH2Q9Y3E5 179 aaKnown RBP17.2■□□□□ 0.34
SCAMP4-213ENST00000621748 LOC105369274A0A096LPK9 316 aa17.19■□□□□ 0.34
SCAMP4-213ENST00000621748 LOC102723532A0A0G2JNH3 316 aa17.19■□□□□ 0.34
SCAMP4-213ENST00000621748 FITM1A5D6W6 292 aa17.19■□□□□ 0.34
SCAMP4-213ENST00000621748 GFYI3L273 518 aa17.19■□□□□ 0.34
SCAMP4-213ENST00000621748 SRPX2O60687 465 aaPredicted RBP17.19■□□□□ 0.34
SCAMP4-213ENST00000621748 TTC4O95801 387 aa17.19■□□□□ 0.34
SCAMP4-213ENST00000621748 SLC16A8O95907 504 aa17.19■□□□□ 0.34
SCAMP4-213ENST00000621748 TUBBP07437 444 aa17.19■□□□□ 0.34
SCAMP4-213ENST00000621748 ENO3P13929 434 aaPredicted RBP17.19■□□□□ 0.34
SCAMP4-213ENST00000621748 OTX2P32243 289 aa17.19■□□□□ 0.34
SCAMP4-213ENST00000621748 PNLIPRP1P54315 467 aa17.19■□□□□ 0.34
SCAMP4-213ENST00000621748 ARSFP54793 590 aa17.19■□□□□ 0.34
SCAMP4-213ENST00000621748 VSX2P58304 361 aaPredicted RBP17.19■□□□□ 0.34
SCAMP4-213ENST00000621748 KLRB1Q12918 225 aa17.19■□□□□ 0.34
SCAMP4-213ENST00000621748 ATP1A4Q13733 1029 aa17.19■□□□□ 0.34
SCAMP4-213ENST00000621748 SSPNQ14714 243 aa17.19■□□□□ 0.34
SCAMP4-213ENST00000621748 ARHGAP19Q14CB8 494 aa17.19■□□□□ 0.34
SCAMP4-213ENST00000621748 TCTE1Q5JU00 501 aa17.19■□□□□ 0.34
SCAMP4-213ENST00000621748 WASHC2DQ5SRD0 308 aa17.19■□□□□ 0.34
SCAMP4-213ENST00000621748 FBXO42Q6P3S6 717 aa17.19■□□□□ 0.34
SCAMP4-213ENST00000621748 PIWIL4Q7Z3Z4 852 aaKnown RBP17.19■□□□□ 0.34
SCAMP4-213ENST00000621748 OR4N4Q8N0Y3 316 aa17.19■□□□□ 0.34
SCAMP4-213ENST00000621748 FBXO15Q8NCQ5 510 aaPredicted RBP17.19■□□□□ 0.34
SCAMP4-213ENST00000621748 PPFIBP2Q8ND30 876 aa17.19■□□□□ 0.34
SCAMP4-213ENST00000621748 ZNF480Q8WV37 535 aa17.19■□□□□ 0.34
SCAMP4-213ENST00000621748 DLG3Q92796 817 aa17.19■□□□□ 0.34
SCAMP4-213ENST00000621748 NDNQ99608 321 aa17.19■□□□□ 0.34
SCAMP4-213ENST00000621748 WDR83Q9BRX9 315 aaKnown RBP17.19■□□□□ 0.34
SCAMP4-213ENST00000621748 DPH7Q9BTV6 452 aa17.19■□□□□ 0.34
SCAMP4-213ENST00000621748 MLXIPLQ9NP71 852 aa17.19■□□□□ 0.34
SCAMP4-213ENST00000621748 SLC6A20Q9NP91 592 aa17.19■□□□□ 0.34
SCAMP4-213ENST00000621748 CUTCQ9NTM9 273 aa17.19■□□□□ 0.34
SCAMP4-213ENST00000621748 NDOR1Q9UHB4 597 aa17.19■□□□□ 0.34
SCAMP4-213ENST00000621748 DMGDHQ9UI17 866 aaKnown RBP17.19■□□□□ 0.34
SCAMP4-213ENST00000621748 IGKV1-8A0A0C4DH67 115 aa17.18■□□□□ 0.34
SCAMP4-213ENST00000621748 A0A0J9YVX5 310 aa17.18■□□□□ 0.34
SCAMP4-213ENST00000621748 A0A1B0GX78 115 aa17.18■□□□□ 0.34
SCAMP4-213ENST00000621748 OR2A25A4D2G3 310 aa17.18■□□□□ 0.34
SCAMP4-213ENST00000621748 DSCR3O14972 297 aa17.18■□□□□ 0.34
SCAMP4-213ENST00000621748 EIF3HO15372 352 aaKnown RBP eCLIP17.18■□□□□ 0.34
SCAMP4-213ENST00000621748 VPS26AO75436 327 aa17.18■□□□□ 0.34
SCAMP4-213ENST00000621748 SYF2O95926 243 aaKnown RBP17.18■□□□□ 0.34
SCAMP4-213ENST00000621748 AHSGP02765 367 aa17.18■□□□□ 0.34
SCAMP4-213ENST00000621748 CMPK1P30085 196 aa17.18■□□□□ 0.34
SCAMP4-213ENST00000621748 RPA3P35244 121 aaPredicted RBP17.18■□□□□ 0.34
SCAMP4-213ENST00000621748 ELK3P41970 407 aa17.18■□□□□ 0.34
SCAMP4-213ENST00000621748 CARSP49589 748 aaKnown RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms