RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 PRKNO60260 465 aaPredicted RBP10.2□□□□□ -0.78
VPS11-208ENST00000621676 ERAL1O75616 437 aaKnown RBP10.2□□□□□ -0.78
VPS11-208ENST00000621676 GABRG2P18507 467 aa10.2□□□□□ -0.78
VPS11-208ENST00000621676 CSNK1EP49674 416 aaKnown RBP10.2□□□□□ -0.78
VPS11-208ENST00000621676 CSRP3P50461 194 aa10.2□□□□□ -0.78
VPS11-208ENST00000621676 ACSM2AQ08AH3 577 aa10.2□□□□□ -0.78
VPS11-208ENST00000621676 TAF11Q15544 211 aa10.2□□□□□ -0.78
VPS11-208ENST00000621676 ACSM2BQ68CK6 577 aa10.2□□□□□ -0.78
VPS11-208ENST00000621676 SULT1C3Q6IMI6 304 aa10.2□□□□□ -0.78
VPS11-208ENST00000621676 TAF8Q7Z7C8 310 aa10.2□□□□□ -0.78
VPS11-208ENST00000621676 LRRTM4Q86VH4 590 aa10.2□□□□□ -0.78
VPS11-208ENST00000621676 OR1E3Q8WZA6 343 aa10.2□□□□□ -0.78
VPS11-208ENST00000621676 HLA-CQ95604 372 aa10.2□□□□□ -0.78
VPS11-208ENST00000621676 OR52E6Q96RD3 313 aa10.2□□□□□ -0.78
VPS11-208ENST00000621676 NUDT4Q9NZJ9 180 aa10.2□□□□□ -0.78
VPS11-208ENST00000621676 KCNE2Q9Y6J6 123 aa10.2□□□□□ -0.78
VPS11-208ENST00000621676 A0A0J9YVX5 310 aa10.2□□□□□ -0.78
VPS11-208ENST00000621676 A8MU76 341 aa10.2□□□□□ -0.78
VPS11-208ENST00000621676 PDLIM1O00151 329 aa10.2□□□□□ -0.78
VPS11-208ENST00000621676 MANBAO00462 879 aa10.2□□□□□ -0.78
VPS11-208ENST00000621676 MBTPS2O43462 519 aa10.2□□□□□ -0.78
VPS11-208ENST00000621676 CDC123O75794 336 aaPredicted RBP10.2□□□□□ -0.78
VPS11-208ENST00000621676 WISP3O95389 354 aaPredicted RBP10.2□□□□□ -0.78
VPS11-208ENST00000621676 CKMT2P17540 419 aa10.2□□□□□ -0.78
VPS11-208ENST00000621676 AOC1P19801 751 aa10.2□□□□□ -0.78
VPS11-208ENST00000621676 ALDH4A1P30038 563 aa10.2□□□□□ -0.78
VPS11-208ENST00000621676 SOAT1P35610 550 aa10.2□□□□□ -0.78
VPS11-208ENST00000621676 SUOXP51687 545 aa10.2□□□□□ -0.78
VPS11-208ENST00000621676 FOXL2P58012 376 aa10.2□□□□□ -0.78
VPS11-208ENST00000621676 DNAJB13P59910 316 aa10.2□□□□□ -0.78
VPS11-208ENST00000621676 CTBSQ01459 385 aa10.2□□□□□ -0.78
VPS11-208ENST00000621676 SLC14A2Q15849 920 aa10.2□□□□□ -0.78
VPS11-208ENST00000621676 LDLRAP1Q5SW96 308 aa10.2□□□□□ -0.78
VPS11-208ENST00000621676 OTUD3Q5T2D3 398 aaPredicted RBP10.2□□□□□ -0.78
VPS11-208ENST00000621676 PRSS58Q8IYP2 241 aa10.2□□□□□ -0.78
VPS11-208ENST00000621676 OR2T3Q8NH03 318 aa10.2□□□□□ -0.78
VPS11-208ENST00000621676 HUS1BQ8NHY5 278 aa10.2□□□□□ -0.78
VPS11-208ENST00000621676 PROKR1Q8TCW9 393 aa10.2□□□□□ -0.78
VPS11-208ENST00000621676 PEX13Q92968 403 aa10.2□□□□□ -0.78
VPS11-208ENST00000621676 MIEF2Q96C03 454 aa10.2□□□□□ -0.78
VPS11-208ENST00000621676 L3HYPDHQ96EM0 354 aa10.2□□□□□ -0.78
VPS11-208ENST00000621676 LYSMD1Q96S90 227 aa10.2□□□□□ -0.78
VPS11-208ENST00000621676 GPRC5BQ9NZH0 403 aa10.2□□□□□ -0.78
VPS11-208ENST00000621676 MUTYHQ9UIF7 546 aa10.2□□□□□ -0.78
VPS11-208ENST00000621676 CROTQ9UKG9 612 aa10.2□□□□□ -0.78
VPS11-208ENST00000621676 DOLKQ9UPQ8 538 aa10.2□□□□□ -0.78
VPS11-208ENST00000621676 PSMG1O95456 288 aa10.19□□□□□ -0.78
VPS11-208ENST00000621676 PEX2P28328 305 aa10.19□□□□□ -0.78
VPS11-208ENST00000621676 POLR2JP52435 117 aaKnown RBP10.19□□□□□ -0.78
VPS11-208ENST00000621676 IST1P53990 364 aa10.19□□□□□ -0.78
VPS11-208ENST00000621676 HYAL2Q12891 473 aa10.19□□□□□ -0.78
VPS11-208ENST00000621676 ZNF750Q32MQ0 723 aa10.19□□□□□ -0.78
VPS11-208ENST00000621676 AMZ1Q400G9 498 aa10.19□□□□□ -0.78
VPS11-208ENST00000621676 USP53Q70EK8 1073 aa10.19□□□□□ -0.78
VPS11-208ENST00000621676 LCA5Q86VQ0 697 aa10.19□□□□□ -0.78
VPS11-208ENST00000621676 TRIM48Q8IWZ4 208 aa10.19□□□□□ -0.78
VPS11-208ENST00000621676 OR4N5Q8IXE1 308 aa10.19□□□□□ -0.78
VPS11-208ENST00000621676 AMER3Q8N944 861 aa10.19□□□□□ -0.78
VPS11-208ENST00000621676 TSTD1Q8NFU3 115 aa10.19□□□□□ -0.78
VPS11-208ENST00000621676 MAL2Q969L2 176 aa10.19□□□□□ -0.78
VPS11-208ENST00000621676 BIRC7Q96CA5 298 aa10.19□□□□□ -0.78
VPS11-208ENST00000621676 MSLNLQ96KJ4 702 aa10.19□□□□□ -0.78
VPS11-208ENST00000621676 MAP10Q9P2G4 905 aa10.19□□□□□ -0.78
VPS11-208ENST00000621676 BTBD3Q9Y2F9 522 aa10.19□□□□□ -0.78
VPS11-208ENST00000621676 SNX11Q9Y5W9 270 aa10.19□□□□□ -0.78
VPS11-208ENST00000621676 MGRN1O60291 552 aa10.19□□□□□ -0.78
VPS11-208ENST00000621676 ATP5HO75947 161 aa10.19□□□□□ -0.78
VPS11-208ENST00000621676 C1orf105O95561 183 aa10.19□□□□□ -0.78
VPS11-208ENST00000621676 CLIC3O95833 236 aa10.19□□□□□ -0.78
VPS11-208ENST00000621676 KRT6AP02538 564 aa10.19□□□□□ -0.78
VPS11-208ENST00000621676 KRT6BP04259 564 aa10.19□□□□□ -0.78
VPS11-208ENST00000621676 BCKDHAP12694 445 aa10.19□□□□□ -0.78
VPS11-208ENST00000621676 KRT6CP48668 564 aa10.19□□□□□ -0.78
VPS11-208ENST00000621676 SNRPNP63162 240 aaKnown RBP10.19□□□□□ -0.78
VPS11-208ENST00000621676 FRG1Q14331 258 aaKnown RBP10.19□□□□□ -0.78
VPS11-208ENST00000621676 C16orf72Q14CZ0 275 aa10.19□□□□□ -0.78
VPS11-208ENST00000621676 CBARPQ8N350 705 aaPredicted RBP10.19□□□□□ -0.78
VPS11-208ENST00000621676 DDHD1Q8NEL9 900 aa10.19□□□□□ -0.78
VPS11-208ENST00000621676 WDR48Q8TAF3 677 aa10.19□□□□□ -0.78
VPS11-208ENST00000621676 NRG4Q8WWG1 115 aa10.19□□□□□ -0.78
VPS11-208ENST00000621676 ECSITQ9BQ95 431 aa10.19□□□□□ -0.78
VPS11-208ENST00000621676 SLC12A9Q9BXP2 914 aa10.19□□□□□ -0.78
VPS11-208ENST00000621676 SMOC1Q9H4F8 434 aa10.19□□□□□ -0.78
VPS11-208ENST00000621676 MEAF6Q9HAF1 191 aa10.19□□□□□ -0.78
VPS11-208ENST00000621676 IL21RQ9HBE5 538 aa10.19□□□□□ -0.78
VPS11-208ENST00000621676 PHPT1Q9NRX4 125 aaPredicted RBP10.19□□□□□ -0.78
VPS11-208ENST00000621676 RAPGEFL1Q9UHV5 662 aa10.19□□□□□ -0.78
VPS11-208ENST00000621676 LNPEPQ9UIQ6 1025 aa10.19□□□□□ -0.78
VPS11-208ENST00000621676 MAGED1Q9Y5V3 778 aaPredicted RBP10.19□□□□□ -0.78
VPS11-208ENST00000621676 MTCL1Q9Y4B5 1905 aaKnown RBP10.19□□□□□ -0.78
VPS11-208ENST00000621676 CACNB4O00305 520 aaPredicted RBP10.18□□□□□ -0.78
VPS11-208ENST00000621676 ARNTLO00327 626 aa10.18□□□□□ -0.78
VPS11-208ENST00000621676 H2AFYO75367 372 aaKnown RBP10.18□□□□□ -0.78
VPS11-208ENST00000621676 SMNDC1O75940 238 aaKnown RBP eCLIP10.18□□□□□ -0.78
VPS11-208ENST00000621676 OPN1SWP03999 348 aa10.18□□□□□ -0.78
VPS11-208ENST00000621676 CTSEP14091 401 aa10.18□□□□□ -0.78
VPS11-208ENST00000621676 TAP2Q03519 686 aa10.18□□□□□ -0.78
VPS11-208ENST00000621676 MAP7Q14244 749 aa10.18□□□□□ -0.78
VPS11-208ENST00000621676 LRRC23Q53EV4 343 aaPredicted RBP10.18□□□□□ -0.78
VPS11-208ENST00000621676 MTX3Q5HYI7 312 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms