RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 TRHDEQ9UKU6 1024 aa7.52□□□□□ -1.2
CLK1-215ENST00000621181 ICKQ9UPZ9 632 aa7.52□□□□□ -1.2
CLK1-215ENST00000621181 ASF1AQ9Y294 204 aa7.52□□□□□ -1.2
CLK1-215ENST00000621181 CCDC168Q8NDH2 2452 aa7.52□□□□□ -1.21
CLK1-215ENST00000621181 NUP210LQ5VU65 1888 aa7.52□□□□□ -1.21
CLK1-215ENST00000621181 A0A0J9YY10 115 aa7.52□□□□□ -1.21
CLK1-215ENST00000621181 AGAP14A8MT82 685 aa7.52□□□□□ -1.21
CLK1-215ENST00000621181 E7EVH7 732 aa7.52□□□□□ -1.21
CLK1-215ENST00000621181 CTSBP07858 339 aa7.52□□□□□ -1.21
CLK1-215ENST00000621181 STSP08842 583 aa7.52□□□□□ -1.21
CLK1-215ENST00000621181 CHRM5P08912 532 aaPredicted RBP7.52□□□□□ -1.21
CLK1-215ENST00000621181 GRNP28799 593 aaKnown RBP7.52□□□□□ -1.21
CLK1-215ENST00000621181 SLC1A1P43005 524 aa7.52□□□□□ -1.21
CLK1-215ENST00000621181 PLTPP55058 493 aa7.52□□□□□ -1.21
CLK1-215ENST00000621181 XIAPP98170 497 aa7.52□□□□□ -1.21
CLK1-215ENST00000621181 ACTN3Q08043 901 aaPredicted RBP7.52□□□□□ -1.21
CLK1-215ENST00000621181 BOP1Q14137 746 aaKnown RBP7.52□□□□□ -1.21
CLK1-215ENST00000621181 SPRED3Q2MJR0 410 aa7.52□□□□□ -1.21
CLK1-215ENST00000621181 TFDP3Q5H9I0 405 aa7.52□□□□□ -1.21
CLK1-215ENST00000621181 FCRL6Q6DN72 434 aa7.52□□□□□ -1.21
CLK1-215ENST00000621181 UNC5AQ6ZN44 842 aa7.52□□□□□ -1.21
CLK1-215ENST00000621181 TMEM151BQ8IW70 566 aa7.52□□□□□ -1.21
CLK1-215ENST00000621181 PARP9Q8IXQ6 854 aa7.52□□□□□ -1.21
CLK1-215ENST00000621181 BCORP1Q8N888 145 aa7.52□□□□□ -1.21
CLK1-215ENST00000621181 OR5AR1Q8NGP9 310 aa7.52□□□□□ -1.21
CLK1-215ENST00000621181 DENND1AQ8TEH3 1009 aa7.52□□□□□ -1.21
CLK1-215ENST00000621181 DLG3Q92796 817 aa7.52□□□□□ -1.21
CLK1-215ENST00000621181 VPS50Q96JG6 964 aa7.52□□□□□ -1.21
CLK1-215ENST00000621181 MAGEB10Q96LZ2 347 aaPredicted RBP7.52□□□□□ -1.21
CLK1-215ENST00000621181 FERMT1Q9BQL6 677 aa7.52□□□□□ -1.21
CLK1-215ENST00000621181 CHRNA10Q9GZZ6 450 aa7.52□□□□□ -1.21
CLK1-215ENST00000621181 LHPPQ9H008 270 aa7.52□□□□□ -1.21
CLK1-215ENST00000621181 GBA3Q9H227 469 aa7.52□□□□□ -1.21
CLK1-215ENST00000621181 CCDC134Q9H6E4 229 aa7.52□□□□□ -1.21
CLK1-215ENST00000621181 CNOT10Q9H9A5 744 aaKnown RBP7.52□□□□□ -1.21
CLK1-215ENST00000621181 OR6C2Q9NZP2 312 aa7.52□□□□□ -1.21
CLK1-215ENST00000621181 PLCL2Q9UPR0 1127 aa7.52□□□□□ -1.21
CLK1-215ENST00000621181 TDRKHQ9Y2W6 561 aaKnown RBP7.52□□□□□ -1.21
CLK1-215ENST00000621181 NEU2Q9Y3R4 380 aa7.52□□□□□ -1.21
CLK1-215ENST00000621181 TACC2O95359 2948 aa7.52□□□□□ -1.21
CLK1-215ENST00000621181 PCNX1Q96RV3 2341 aa7.51□□□□□ -1.21
CLK1-215ENST00000621181 A0A1B0GX78 115 aa7.51□□□□□ -1.21
CLK1-215ENST00000621181 CCDC78A2IDD5 438 aa7.51□□□□□ -1.21
CLK1-215ENST00000621181 ISM1B1AKI9 464 aa7.51□□□□□ -1.21
CLK1-215ENST00000621181 CCL22O00626 93 aa7.51□□□□□ -1.21
CLK1-215ENST00000621181 KDM1AO60341 852 aa7.51□□□□□ -1.21
CLK1-215ENST00000621181 JRKO75564 520 aa7.51□□□□□ -1.21
CLK1-215ENST00000621181 PIM1P11309 404 aaPredicted RBP7.51□□□□□ -1.21
CLK1-215ENST00000621181 ACRV1P26436 265 aa7.51□□□□□ -1.21
CLK1-215ENST00000621181 HNRNPH1P31943 449 aaKnown RBP7.51□□□□□ -1.21
CLK1-215ENST00000621181 GABRA4P48169 554 aa7.51□□□□□ -1.21
CLK1-215ENST00000621181 OLIG2Q13516 323 aa7.51□□□□□ -1.21
CLK1-215ENST00000621181 SLC29A2Q14542 456 aa7.51□□□□□ -1.21
CLK1-215ENST00000621181 GPR33Q49SQ1 333 aa7.51□□□□□ -1.21
CLK1-215ENST00000621181 ITPRIPL1Q6GPH6 555 aa7.51□□□□□ -1.21
CLK1-215ENST00000621181 CCDC137Q6PK04 289 aaKnown RBP7.51□□□□□ -1.21
CLK1-215ENST00000621181 IGFL2Q6UWQ7 119 aa7.51□□□□□ -1.21
CLK1-215ENST00000621181 RANBP10Q6VN20 620 aa7.51□□□□□ -1.21
CLK1-215ENST00000621181 SHISA6Q6ZSJ9 500 aa7.51□□□□□ -1.21
CLK1-215ENST00000621181 TTLL10Q6ZVT0 673 aa7.51□□□□□ -1.21
CLK1-215ENST00000621181 MICALCLQ6ZW33 695 aa7.51□□□□□ -1.21
CLK1-215ENST00000621181 TAS2R42Q7RTR8 314 aa7.51□□□□□ -1.21
CLK1-215ENST00000621181 GDF7Q7Z4P5 450 aa7.51□□□□□ -1.21
CLK1-215ENST00000621181 CCDC50Q8IVM0 306 aa7.51□□□□□ -1.21
CLK1-215ENST00000621181 CLDN19Q8N6F1 224 aa7.51□□□□□ -1.21
CLK1-215ENST00000621181 FKBP10Q96AY3 582 aa7.51□□□□□ -1.21
CLK1-215ENST00000621181 THOC3Q96J01 351 aaKnown RBP7.51□□□□□ -1.21
CLK1-215ENST00000621181 SEC16BQ96JE7 1060 aa7.51□□□□□ -1.21
CLK1-215ENST00000621181 RUNDC3BQ96NL0 473 aa7.51□□□□□ -1.21
CLK1-215ENST00000621181 QKIQ96PU8 341 aaKnown RBP eCLIP7.51□□□□□ -1.21
CLK1-215ENST00000621181 SLX1AQ9BQ83 275 aa7.51□□□□□ -1.21
CLK1-215ENST00000621181 WDR54Q9H977 334 aa7.51□□□□□ -1.21
CLK1-215ENST00000621181 MRM3Q9HC36 420 aaKnown RBP7.51□□□□□ -1.21
CLK1-215ENST00000621181 PPANQ9NQ55 473 aaKnown RBP7.51□□□□□ -1.21
CLK1-215ENST00000621181 SPHK1Q9NYA1 384 aa7.51□□□□□ -1.21
CLK1-215ENST00000621181 ZDHHC3Q9NYG2 299 aa7.51□□□□□ -1.21
CLK1-215ENST00000621181 POLG2Q9UHN1 485 aa7.51□□□□□ -1.21
CLK1-215ENST00000621181 AAR2Q9Y312 384 aaKnown RBP7.51□□□□□ -1.21
CLK1-215ENST00000621181 IGLV3-16A0A075B6K0 115 aa7.5□□□□□ -1.21
CLK1-215ENST00000621181 DYTNA2CJ06 578 aa7.5□□□□□ -1.21
CLK1-215ENST00000621181 HACD1B0YJ81 288 aa7.5□□□□□ -1.21
CLK1-215ENST00000621181 H7C0C1 242 aa7.5□□□□□ -1.21
CLK1-215ENST00000621181 SOCS6O14544 535 aa7.5□□□□□ -1.21
CLK1-215ENST00000621181 LIN7AO14910 233 aaPredicted RBP7.5□□□□□ -1.21
CLK1-215ENST00000621181 RIPK2O43353 540 aa7.5□□□□□ -1.21
CLK1-215ENST00000621181 ALBP02768 609 aa7.5□□□□□ -1.21
CLK1-215ENST00000621181 ITGAXP20702 1163 aa7.5□□□□□ -1.21
CLK1-215ENST00000621181 MAGP20916 626 aa7.5□□□□□ -1.21
CLK1-215ENST00000621181 MC4RP32245 332 aa7.5□□□□□ -1.21
CLK1-215ENST00000621181 ATP5OP48047 213 aa7.5□□□□□ -1.21
CLK1-215ENST00000621181 CDKN1CP49918 316 aaPredicted RBP7.5□□□□□ -1.21
CLK1-215ENST00000621181 ZNF140P52738 457 aaPredicted RBP7.5□□□□□ -1.21
CLK1-215ENST00000621181 ARSFP54793 590 aa7.5□□□□□ -1.21
CLK1-215ENST00000621181 RWDD2BP57060 319 aa7.5□□□□□ -1.21
CLK1-215ENST00000621181 KCNK10P57789 538 aa7.5□□□□□ -1.21
CLK1-215ENST00000621181 ARG2P78540 354 aa7.5□□□□□ -1.21
CLK1-215ENST00000621181 OTUD4Q01804 1114 aaKnown RBP7.5□□□□□ -1.21
CLK1-215ENST00000621181 IFT88Q13099 833 aa7.5□□□□□ -1.21
CLK1-215ENST00000621181 PRPSAP1Q14558 356 aa7.5□□□□□ -1.21
CLK1-215ENST00000621181 KIR2DS3Q14952 304 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms