RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 RNF31Q96EP0 1072 aa17.57■□□□□ 0.4
LITAF-220ENST00000620789 MED8Q96G25 268 aa17.57■□□□□ 0.4
LITAF-220ENST00000620789 ATG10Q9H0Y0 220 aa17.57■□□□□ 0.4
LITAF-220ENST00000620789 EPB41L4BQ9H329 900 aa17.57■□□□□ 0.4
LITAF-220ENST00000620789 SLC6A20Q9NP91 592 aa17.57■□□□□ 0.4
LITAF-220ENST00000620789 SNX15Q9NRS6 342 aa17.57■□□□□ 0.4
LITAF-220ENST00000620789 ABCF3Q9NUQ8 709 aa17.57■□□□□ 0.4
LITAF-220ENST00000620789 SERTAD3Q9UJW9 196 aa17.57■□□□□ 0.4
LITAF-220ENST00000620789 PLCL2Q9UPR0 1127 aa17.57■□□□□ 0.4
LITAF-220ENST00000620789 SSUH2Q9Y2M2 353 aa17.57■□□□□ 0.4
LITAF-220ENST00000620789 KMT2BQ9UMN6 2715 aaPredicted RBP17.56■□□□□ 0.4
LITAF-220ENST00000620789 KRT38O76015 456 aa17.56■□□□□ 0.4
LITAF-220ENST00000620789 ALDOAP04075 364 aaKnown RBP17.56■□□□□ 0.4
LITAF-220ENST00000620789 CCND1P24385 295 aa17.56■□□□□ 0.4
LITAF-220ENST00000620789 CNTFP26441 200 aa17.56■□□□□ 0.4
LITAF-220ENST00000620789 SERPINB8P50452 374 aa17.56■□□□□ 0.4
LITAF-220ENST00000620789 ATP1A2P50993 1020 aa17.56■□□□□ 0.4
LITAF-220ENST00000620789 ITGA1P56199 1179 aa17.56■□□□□ 0.4
LITAF-220ENST00000620789 VSNL1P62760 191 aa17.56■□□□□ 0.4
LITAF-220ENST00000620789 CDKL1Q00532 357 aa17.56■□□□□ 0.4
LITAF-220ENST00000620789 NAE1Q13564 534 aa17.56■□□□□ 0.4
LITAF-220ENST00000620789 ZXDCQ2QGD7 858 aaPredicted RBP17.56■□□□□ 0.4
LITAF-220ENST00000620789 PRAMEF13Q5VWM6 474 aa17.56■□□□□ 0.4
LITAF-220ENST00000620789 TBC1D1Q86TI0 1168 aaPredicted RBP17.56■□□□□ 0.4
LITAF-220ENST00000620789 CACNA2D3Q8IZS8 1091 aa17.56■□□□□ 0.4
LITAF-220ENST00000620789 NLGN4XQ8N0W4 816 aa17.56■□□□□ 0.4
LITAF-220ENST00000620789 NLGN4YQ8NFZ3 816 aaPredicted RBP17.56■□□□□ 0.4
LITAF-220ENST00000620789 DPH7Q9BTV6 452 aa17.56■□□□□ 0.4
LITAF-220ENST00000620789 SGPP1Q9BX95 441 aa17.56■□□□□ 0.4
LITAF-220ENST00000620789 PCBD2Q9H0N5 130 aa17.56■□□□□ 0.4
LITAF-220ENST00000620789 ANKMY1Q9P2S6 941 aa17.56■□□□□ 0.4
LITAF-220ENST00000620789 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.56■□□□□ 0.4
LITAF-220ENST00000620789 ACOT9Q9Y305 439 aa17.56■□□□□ 0.4
LITAF-220ENST00000620789 PCDHB3Q9Y5E6 796 aa17.56■□□□□ 0.4
LITAF-220ENST00000620789 V9GYY5 206 aaPredicted RBP17.56■□□□□ 0.4
LITAF-220ENST00000620789 A0A087X1B8 175 aa17.55■□□□□ 0.4
LITAF-220ENST00000620789 IGKV1-8A0A0C4DH67 115 aa17.55■□□□□ 0.4
LITAF-220ENST00000620789 TEX51A0A1B0GUA7 166 aa17.55■□□□□ 0.4
LITAF-220ENST00000620789 OR2A25A4D2G3 310 aa17.55■□□□□ 0.4
LITAF-220ENST00000620789 H3BMH7 237 aa17.55■□□□□ 0.4
LITAF-220ENST00000620789 CPNE3O75131 537 aaKnown RBP17.55■□□□□ 0.4
LITAF-220ENST00000620789 C2P06681 752 aa17.55■□□□□ 0.4
LITAF-220ENST00000620789 ANXA5P08758 320 aa17.55■□□□□ 0.4
LITAF-220ENST00000620789 LTA4HP09960 611 aaKnown RBP17.55■□□□□ 0.4
LITAF-220ENST00000620789 TYK2P29597 1187 aa17.55■□□□□ 0.4
LITAF-220ENST00000620789 GMPRP36959 345 aa17.55■□□□□ 0.4
LITAF-220ENST00000620789 DLG1Q12959 904 aa17.55■□□□□ 0.4
LITAF-220ENST00000620789 TGFBIQ15582 683 aa17.55■□□□□ 0.4
LITAF-220ENST00000620789 TAF1BQ53T94 588 aaPredicted RBP17.55■□□□□ 0.4
LITAF-220ENST00000620789 ZC3H12BQ5HYM0 836 aaKnown RBP17.55■□□□□ 0.4
LITAF-220ENST00000620789 BROXQ5VW32 411 aa17.55■□□□□ 0.4
LITAF-220ENST00000620789 CAPN13Q6MZZ7 669 aaPredicted RBP17.55■□□□□ 0.4
LITAF-220ENST00000620789 C6orf15Q6UXA7 325 aaPredicted RBP17.55■□□□□ 0.4
LITAF-220ENST00000620789 MCATQ8IVS2 390 aaKnown RBP17.55■□□□□ 0.4
LITAF-220ENST00000620789 GPR135Q8IZ08 494 aa17.55■□□□□ 0.4
LITAF-220ENST00000620789 ESX1Q8N693 406 aa17.55■□□□□ 0.4
LITAF-220ENST00000620789 GALNT6Q8NCL4 622 aa17.55■□□□□ 0.4
LITAF-220ENST00000620789 OR56A3Q8NH54 315 aa17.55■□□□□ 0.4
LITAF-220ENST00000620789 ISL2Q96A47 359 aa17.55■□□□□ 0.4
LITAF-220ENST00000620789 KIAA1191Q96A73 305 aa17.55■□□□□ 0.4
LITAF-220ENST00000620789 PTERQ96BW5 349 aa17.55■□□□□ 0.4
LITAF-220ENST00000620789 EGFL8Q99944 293 aa17.55■□□□□ 0.4
LITAF-220ENST00000620789 DHRS4Q9BTZ2 278 aa17.55■□□□□ 0.4
LITAF-220ENST00000620789 WDR70Q9NW82 654 aa17.55■□□□□ 0.4
LITAF-220ENST00000620789 EURLQ9NYK6 297 aa17.55■□□□□ 0.4
LITAF-220ENST00000620789 TLK1Q9UKI8 766 aa17.55■□□□□ 0.4
LITAF-220ENST00000620789 PCM1Q15154 2024 aa17.55■□□□□ 0.4
LITAF-220ENST00000620789 ANKRD12Q6UB98 2062 aa17.54■□□□□ 0.4
LITAF-220ENST00000620789 ITPR1Q14643 2758 aa17.54■□□□□ 0.4
LITAF-220ENST00000620789 A0A096LPK6 155 aa17.54■□□□□ 0.4
LITAF-220ENST00000620789 E7EQ34 232 aa17.54■□□□□ 0.4
LITAF-220ENST00000620789 NRP2O60462 931 aa17.54■□□□□ 0.4
LITAF-220ENST00000620789 CTSVO60911 334 aa17.54■□□□□ 0.4
LITAF-220ENST00000620789 OR2B3O76000 313 aa17.54■□□□□ 0.4
LITAF-220ENST00000620789 MT-ND3P03897 115 aa17.54■□□□□ 0.4
LITAF-220ENST00000620789 NTRK1P04629 796 aa17.54■□□□□ 0.4
LITAF-220ENST00000620789 GCAP28676 217 aa17.54■□□□□ 0.4
LITAF-220ENST00000620789 HNMTP50135 292 aa17.54■□□□□ 0.4
LITAF-220ENST00000620789 IRF9Q00978 393 aa17.54■□□□□ 0.4
LITAF-220ENST00000620789 OR4D1Q15615 310 aa17.54■□□□□ 0.4
LITAF-220ENST00000620789 PRAMEF17Q5VTA0 474 aa17.54■□□□□ 0.4
LITAF-220ENST00000620789 ZNF425Q6IV72 752 aa17.54■□□□□ 0.4
LITAF-220ENST00000620789 WDR93Q6P2C0 686 aa17.54■□□□□ 0.4
LITAF-220ENST00000620789 LCTLQ6UWM7 567 aa17.54■□□□□ 0.4
LITAF-220ENST00000620789 RNF44Q7L0R7 432 aa17.54■□□□□ 0.4
LITAF-220ENST00000620789 PAQR7Q86WK9 346 aa17.54■□□□□ 0.4
LITAF-220ENST00000620789 CENPLQ8N0S6 344 aaPredicted RBP17.54■□□□□ 0.4
LITAF-220ENST00000620789 IL22RA1Q8N6P7 574 aa17.54■□□□□ 0.4
LITAF-220ENST00000620789 HNRNPLLQ8WVV9 542 aaKnown RBP17.54■□□□□ 0.4
LITAF-220ENST00000620789 ALKBH8Q96BT7 664 aaKnown RBP17.54■□□□□ 0.4
LITAF-220ENST00000620789 PYCR2Q96C36 320 aa17.54■□□□□ 0.4
LITAF-220ENST00000620789 CCNL2Q96S94 520 aaPredicted RBP17.54■□□□□ 0.4
LITAF-220ENST00000620789 PLCD4Q9BRC7 762 aa17.54■□□□□ 0.4
LITAF-220ENST00000620789 NMRAL1Q9HBL8 299 aa17.54■□□□□ 0.4
LITAF-220ENST00000620789 IGSF5Q9NSI5 407 aa17.54■□□□□ 0.4
LITAF-220ENST00000620789 CUEDC1Q9NWM3 386 aaPredicted RBP17.54■□□□□ 0.4
LITAF-220ENST00000620789 FETUBQ9UGM5 382 aa17.54■□□□□ 0.4
LITAF-220ENST00000620789 SNX7Q9UNH6 387 aa17.54■□□□□ 0.4
LITAF-220ENST00000620789 KRT37O76014 449 aa17.53■□□□□ 0.4
LITAF-220ENST00000620789 CTSBP07858 339 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms