RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 PDCD4Q53EL6 469 aaKnown RBP12.3□□□□□ -0.44
TNFAIP3-209ENST00000619035 LIPJQ5W064 366 aa12.3□□□□□ -0.44
TNFAIP3-209ENST00000619035 C8orf82Q6P1X6 216 aaPredicted RBP12.3□□□□□ -0.44
TNFAIP3-209ENST00000619035 BLOC1S3Q6QNY0 202 aa12.3□□□□□ -0.44
TNFAIP3-209ENST00000619035 DCUN1D3Q8IWE4 304 aa12.3□□□□□ -0.44
TNFAIP3-209ENST00000619035 OR2T34Q8NGX1 318 aa12.3□□□□□ -0.44
TNFAIP3-209ENST00000619035 RAD51AP1Q96B01 352 aa12.3□□□□□ -0.44
TNFAIP3-209ENST00000619035 MTERF1Q99551 399 aaKnown RBP12.3□□□□□ -0.44
TNFAIP3-209ENST00000619035 FGF22Q9HCT0 170 aa12.3□□□□□ -0.44
TNFAIP3-209ENST00000619035 SLC52A3Q9NQ40 469 aa12.3□□□□□ -0.44
TNFAIP3-209ENST00000619035 ITM2CQ9NQX7 267 aa12.3□□□□□ -0.44
TNFAIP3-209ENST00000619035 SLAMF8Q9P0V8 285 aa12.3□□□□□ -0.44
TNFAIP3-209ENST00000619035 TMEM181Q9P2C4 612 aa12.3□□□□□ -0.44
TNFAIP3-209ENST00000619035 EBF1Q9UH73 591 aa12.3□□□□□ -0.44
TNFAIP3-209ENST00000619035 CYP8B1Q9UNU6 501 aa12.3□□□□□ -0.44
TNFAIP3-209ENST00000619035 EIF3LQ9Y262 564 aaKnown RBP12.3□□□□□ -0.44
TNFAIP3-209ENST00000619035 SLC17A4Q9Y2C5 497 aa12.3□□□□□ -0.44
TNFAIP3-209ENST00000619035 WDR37Q9Y2I8 494 aa12.3□□□□□ -0.44
TNFAIP3-209ENST00000619035 NDUFAF1Q9Y375 327 aa12.3□□□□□ -0.44
TNFAIP3-209ENST00000619035 BBIP1A8MTZ0 92 aa12.29□□□□□ -0.44
TNFAIP3-209ENST00000619035 IGLV3-19P01714 112 aa12.29□□□□□ -0.44
TNFAIP3-209ENST00000619035 POLR2JP52435 117 aaKnown RBP12.29□□□□□ -0.44
TNFAIP3-209ENST00000619035 AQP4P55087 323 aa12.29□□□□□ -0.44
TNFAIP3-209ENST00000619035 TAP2Q03519 686 aa12.29□□□□□ -0.44
TNFAIP3-209ENST00000619035 PTGR1Q14914 329 aa12.29□□□□□ -0.44
TNFAIP3-209ENST00000619035 PAGE3Q5JUK9 113 aa12.29□□□□□ -0.44
TNFAIP3-209ENST00000619035 CATSPEREQ5SY80 951 aa12.29□□□□□ -0.44
TNFAIP3-209ENST00000619035 ENPP7Q6UWV6 458 aa12.29□□□□□ -0.44
TNFAIP3-209ENST00000619035 SYT13Q7L8C5 426 aa12.29□□□□□ -0.44
TNFAIP3-209ENST00000619035 RD3Q7Z3Z2 195 aa12.29□□□□□ -0.44
TNFAIP3-209ENST00000619035 LILRA2Q8N149 483 aa12.29□□□□□ -0.44
TNFAIP3-209ENST00000619035 PCYOX1LQ8NBM8 494 aa12.29□□□□□ -0.44
TNFAIP3-209ENST00000619035 OR5K2Q8NHB8 316 aa12.29□□□□□ -0.44
TNFAIP3-209ENST00000619035 FAM110BQ8TC76 370 aa12.29□□□□□ -0.44
TNFAIP3-209ENST00000619035 PROKR1Q8TCW9 393 aa12.29□□□□□ -0.44
TNFAIP3-209ENST00000619035 SPDL1Q96EA4 605 aa12.29□□□□□ -0.44
TNFAIP3-209ENST00000619035 C12orf66Q96MD2 445 aa12.29□□□□□ -0.44
TNFAIP3-209ENST00000619035 ANKRD27Q96NW4 1050 aa12.29□□□□□ -0.44
TNFAIP3-209ENST00000619035 ACAT2Q9BWD1 397 aa12.29□□□□□ -0.44
TNFAIP3-209ENST00000619035 CARS2Q9HA77 564 aaKnown RBP12.29□□□□□ -0.44
TNFAIP3-209ENST00000619035 CCDC177Q9NQR7 707 aaPredicted RBP12.29□□□□□ -0.44
TNFAIP3-209ENST00000619035 IMP3Q9NV31 184 aaKnown RBP12.29□□□□□ -0.44
TNFAIP3-209ENST00000619035 C2orf42Q9NWW7 574 aa12.29□□□□□ -0.44
TNFAIP3-209ENST00000619035 C1orf109Q9NX04 203 aa12.29□□□□□ -0.44
TNFAIP3-209ENST00000619035 SH2B3Q9UQQ2 575 aa12.29□□□□□ -0.44
TNFAIP3-209ENST00000619035 DYRK1BQ9Y463 629 aa12.29□□□□□ -0.44
TNFAIP3-209ENST00000619035 AK5Q9Y6K8 562 aa12.29□□□□□ -0.44
TNFAIP3-209ENST00000619035 PRSS38A1L453 326 aa12.28□□□□□ -0.44
TNFAIP3-209ENST00000619035 CCDC154A6NI56 674 aa12.28□□□□□ -0.44
TNFAIP3-209ENST00000619035 PDZK1P1A8MUH7 402 aa12.28□□□□□ -0.44
TNFAIP3-209ENST00000619035 FXYD1O00168 92 aa12.28□□□□□ -0.44
TNFAIP3-209ENST00000619035 NME4O00746 187 aa12.28□□□□□ -0.44
TNFAIP3-209ENST00000619035 TOR1BO14657 336 aa12.28□□□□□ -0.44
TNFAIP3-209ENST00000619035 SH3BGRLO75368 114 aa12.28□□□□□ -0.44
TNFAIP3-209ENST00000619035 SEMA4FO95754 770 aa12.28□□□□□ -0.44
TNFAIP3-209ENST00000619035 RPN2P04844 631 aa12.28□□□□□ -0.44
TNFAIP3-209ENST00000619035 CHRNB1P11230 501 aa12.28□□□□□ -0.44
TNFAIP3-209ENST00000619035 PCNAP12004 261 aa12.28□□□□□ -0.44
TNFAIP3-209ENST00000619035 HNRNPA2B1P22626 353 aaKnown RBP12.28□□□□□ -0.44
TNFAIP3-209ENST00000619035 KELP23276 732 aa12.28□□□□□ -0.44
TNFAIP3-209ENST00000619035 PLIN5Q00G26 463 aa12.28□□□□□ -0.44
TNFAIP3-209ENST00000619035 DMPKQ09013 629 aa12.28□□□□□ -0.44
TNFAIP3-209ENST00000619035 MAD2L1Q13257 205 aaPredicted RBP12.28□□□□□ -0.44
TNFAIP3-209ENST00000619035 RCAN2Q14206 197 aa12.28□□□□□ -0.44
TNFAIP3-209ENST00000619035 TRIM25Q14258 630 aaKnown RBP12.28□□□□□ -0.44
TNFAIP3-209ENST00000619035 UBXN2BQ14CS0 331 aa12.28□□□□□ -0.44
TNFAIP3-209ENST00000619035 GRAMD1BQ3KR37 738 aa12.28□□□□□ -0.44
TNFAIP3-209ENST00000619035 PYCR3Q53H96 274 aa12.28□□□□□ -0.44
TNFAIP3-209ENST00000619035 C6orf10Q5SRN2 563 aa12.28□□□□□ -0.44
TNFAIP3-209ENST00000619035 PRPF38BQ5VTL8 546 aaKnown RBP12.28□□□□□ -0.44
TNFAIP3-209ENST00000619035 CACHD1Q5VU97 1274 aa12.28□□□□□ -0.44
TNFAIP3-209ENST00000619035 PQLC1Q8N2U9 271 aa12.28□□□□□ -0.44
TNFAIP3-209ENST00000619035 LIX1Q8N485 282 aa12.28□□□□□ -0.44
TNFAIP3-209ENST00000619035 CLHC1Q8NHS4 586 aa12.28□□□□□ -0.44
TNFAIP3-209ENST00000619035 PDXPQ96GD0 296 aa12.28□□□□□ -0.44
TNFAIP3-209ENST00000619035 SHDQ96IW2 340 aa12.28□□□□□ -0.44
TNFAIP3-209ENST00000619035 NELL2Q99435 816 aa12.28□□□□□ -0.44
TNFAIP3-209ENST00000619035 TIMM29Q9BSF4 260 aa12.28□□□□□ -0.44
TNFAIP3-209ENST00000619035 TRIT1Q9H3H1 467 aaKnown RBP12.28□□□□□ -0.44
TNFAIP3-209ENST00000619035 LMAN1LQ9HAT1 526 aa12.28□□□□□ -0.44
TNFAIP3-209ENST00000619035 ZIM2Q9NZV7 527 aa12.28□□□□□ -0.44
TNFAIP3-209ENST00000619035 WNT16Q9UBV4 365 aa12.28□□□□□ -0.44
TNFAIP3-209ENST00000619035 CD300AQ9UGN4 299 aa12.28□□□□□ -0.44
TNFAIP3-209ENST00000619035 ACSL5Q9ULC5 683 aa12.28□□□□□ -0.44
TNFAIP3-209ENST00000619035 UGDHO60701 494 aa12.28□□□□□ -0.44
TNFAIP3-209ENST00000619035 RSL1D1O76021 490 aaKnown RBP12.28□□□□□ -0.44
TNFAIP3-209ENST00000619035 NPPBP16860 134 aa12.28□□□□□ -0.44
TNFAIP3-209ENST00000619035 PCDH1Q08174 1060 aa12.28□□□□□ -0.44
TNFAIP3-209ENST00000619035 GRIK2Q13002 908 aa12.28□□□□□ -0.44
TNFAIP3-209ENST00000619035 ADNP2Q6IQ32 1131 aa12.28□□□□□ -0.44
TNFAIP3-209ENST00000619035 GRHL2Q6ISB3 625 aa12.28□□□□□ -0.44
TNFAIP3-209ENST00000619035 ZFAND4Q86XD8 727 aa12.28□□□□□ -0.44
TNFAIP3-209ENST00000619035 ZNF687Q8N1G0 1237 aa12.28□□□□□ -0.44
TNFAIP3-209ENST00000619035 DNAJB14Q8TBM8 379 aa12.28□□□□□ -0.44
TNFAIP3-209ENST00000619035 ASB9Q96DX5 294 aa12.28□□□□□ -0.44
TNFAIP3-209ENST00000619035 GUCD1Q96NT3 240 aa12.28□□□□□ -0.44
TNFAIP3-209ENST00000619035 HHIPQ96QV1 700 aa12.28□□□□□ -0.44
TNFAIP3-209ENST00000619035 FERD3LQ96RJ6 166 aa12.28□□□□□ -0.44
TNFAIP3-209ENST00000619035 PKP2Q99959 881 aa12.28□□□□□ -0.44
TNFAIP3-209ENST00000619035 GPATCH1Q9BRR8 931 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms