RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 DCDC1P59894 354 aa12.03□□□□□ -0.48
CIITA-212ENST00000618207 UBE3AQ05086 875 aa12.03□□□□□ -0.48
CIITA-212ENST00000618207 SLC14A1Q13336 389 aa12.03□□□□□ -0.48
CIITA-212ENST00000618207 PLCL1Q15111 1095 aa12.03□□□□□ -0.48
CIITA-212ENST00000618207 TCEA2Q15560 299 aa12.03□□□□□ -0.48
CIITA-212ENST00000618207 HNRNPA1L2Q32P51 320 aaKnown RBP12.03□□□□□ -0.48
CIITA-212ENST00000618207 LRRC23Q53EV4 343 aaPredicted RBP12.03□□□□□ -0.48
CIITA-212ENST00000618207 PPP4R4Q6NUP7 873 aa12.03□□□□□ -0.48
CIITA-212ENST00000618207 GPR180Q86V85 440 aa12.03□□□□□ -0.48
CIITA-212ENST00000618207 ETFBKMTQ8IXQ9 262 aa12.03□□□□□ -0.48
CIITA-212ENST00000618207 PLPP6Q8IY26 295 aa12.03□□□□□ -0.48
CIITA-212ENST00000618207 TCAIMQ8N3R3 496 aa12.03□□□□□ -0.48
CIITA-212ENST00000618207 MIPOL1Q8TD10 442 aa12.03□□□□□ -0.48
CIITA-212ENST00000618207 NEIL2Q969S2 332 aa12.03□□□□□ -0.48
CIITA-212ENST00000618207 TIFAQ96CG3 184 aa12.03□□□□□ -0.48
CIITA-212ENST00000618207 FOPNLQ96NB1 174 aa12.03□□□□□ -0.48
CIITA-212ENST00000618207 SH2B3Q9UQQ2 575 aa12.03□□□□□ -0.48
CIITA-212ENST00000618207 U3KQV3 271 aa12.03□□□□□ -0.48
CIITA-212ENST00000618207 KIF26AQ9ULI4 1882 aaPredicted RBP12.03□□□□□ -0.48
CIITA-212ENST00000618207 PLXNA2O75051 1894 aa12.02□□□□□ -0.48
CIITA-212ENST00000618207 NFATC1O95644 943 aa12.02□□□□□ -0.48
CIITA-212ENST00000618207 SOD1P00441 154 aa12.02□□□□□ -0.48
CIITA-212ENST00000618207 CAPNS1P04632 268 aa12.02□□□□□ -0.48
CIITA-212ENST00000618207 ANXA6P08133 673 aa12.02□□□□□ -0.48
CIITA-212ENST00000618207 AMD1P17707 334 aa12.02□□□□□ -0.48
CIITA-212ENST00000618207 FSHRP23945 695 aa12.02□□□□□ -0.48
CIITA-212ENST00000618207 PRLHRP49683 370 aa12.02□□□□□ -0.48
CIITA-212ENST00000618207 NHSL2Q5HYW2 709 aa12.02□□□□□ -0.48
CIITA-212ENST00000618207 IER5LQ5T953 404 aa12.02□□□□□ -0.48
CIITA-212ENST00000618207 ANKRD34AQ69YU3 496 aa12.02□□□□□ -0.48
CIITA-212ENST00000618207 C16orf87Q6PH81 154 aa12.02□□□□□ -0.48
CIITA-212ENST00000618207 ZNF621Q6ZSS3 439 aa12.02□□□□□ -0.48
CIITA-212ENST00000618207 ZNF786Q8N393 782 aa12.02□□□□□ -0.48
CIITA-212ENST00000618207 METTL25Q8N6Q8 603 aa12.02□□□□□ -0.48
CIITA-212ENST00000618207 SUSD6Q92537 303 aa12.02□□□□□ -0.48
CIITA-212ENST00000618207 SMARCD2Q92925 531 aa12.02□□□□□ -0.48
CIITA-212ENST00000618207 FAM120BQ96EK7 910 aaKnown RBP12.02□□□□□ -0.48
CIITA-212ENST00000618207 ATXN10Q9UBB4 475 aa12.02□□□□□ -0.48
CIITA-212ENST00000618207 MAGEL2Q9UJ55 1249 aa12.02□□□□□ -0.48
CIITA-212ENST00000618207 VPS4AQ9UN37 437 aa12.02□□□□□ -0.48
CIITA-212ENST00000618207 PCDHB3Q9Y5E6 796 aa12.02□□□□□ -0.48
CIITA-212ENST00000618207 SLC5A10A0PJK1 596 aa12.02□□□□□ -0.49
CIITA-212ENST00000618207 DYTNA2CJ06 578 aa12.02□□□□□ -0.49
CIITA-212ENST00000618207 DLGAP1O14490 977 aa12.02□□□□□ -0.49
CIITA-212ENST00000618207 RFXANKO14593 260 aa12.02□□□□□ -0.49
CIITA-212ENST00000618207 ATP6V1G1O75348 118 aa12.02□□□□□ -0.49
CIITA-212ENST00000618207 PSIP1O75475 530 aaKnown RBP12.02□□□□□ -0.49
CIITA-212ENST00000618207 SNAP29O95721 258 aa12.02□□□□□ -0.49
CIITA-212ENST00000618207 ASLP04424 464 aa12.02□□□□□ -0.49
CIITA-212ENST00000618207 JUPP14923 745 aa12.02□□□□□ -0.49
CIITA-212ENST00000618207 CLDN8P56748 225 aa12.02□□□□□ -0.49
CIITA-212ENST00000618207 ROR2Q01974 943 aaKnown RBP12.02□□□□□ -0.49
CIITA-212ENST00000618207 NKG7Q16617 165 aa12.02□□□□□ -0.49
CIITA-212ENST00000618207 GAB4Q2WGN9 574 aa12.02□□□□□ -0.49
CIITA-212ENST00000618207 CNPY1Q3B7I2 92 aa12.02□□□□□ -0.49
CIITA-212ENST00000618207 NADK2Q4G0N4 442 aa12.02□□□□□ -0.49
CIITA-212ENST00000618207 PROSER1Q86XN7 944 aa12.02□□□□□ -0.49
CIITA-212ENST00000618207 CLECL1Q8IZS7 167 aa12.02□□□□□ -0.49
CIITA-212ENST00000618207 L3MBTL4Q8NA19 623 aa12.02□□□□□ -0.49
CIITA-212ENST00000618207 PHOSPHO2Q8TCD6 241 aa12.02□□□□□ -0.49
CIITA-212ENST00000618207 FAM129BQ96TA1 746 aa12.02□□□□□ -0.49
CIITA-212ENST00000618207 TRIM4Q9C037 500 aa12.02□□□□□ -0.49
CIITA-212ENST00000618207 REXO4Q9GZR2 422 aaKnown RBP12.02□□□□□ -0.49
CIITA-212ENST00000618207 SPATA7Q9P0W8 599 aa12.02□□□□□ -0.49
CIITA-212ENST00000618207 KLHL42Q9P2K6 505 aa12.02□□□□□ -0.49
CIITA-212ENST00000618207 TDRKHQ9Y2W6 561 aaKnown RBP12.02□□□□□ -0.49
CIITA-212ENST00000618207 ELOVL7A1L3X0 281 aa12.01□□□□□ -0.49
CIITA-212ENST00000618207 EIF3FO00303 357 aaPredicted RBP12.01□□□□□ -0.49
CIITA-212ENST00000618207 HOXC11O43248 304 aaPredicted RBP12.01□□□□□ -0.49
CIITA-212ENST00000618207 PRKD3O94806 890 aa12.01□□□□□ -0.49
CIITA-212ENST00000618207 PCDH8O95206 1070 aa12.01□□□□□ -0.49
CIITA-212ENST00000618207 PCCBP05166 539 aa12.01□□□□□ -0.49
CIITA-212ENST00000618207 ABCB1P08183 1280 aaPredicted RBP12.01□□□□□ -0.49
CIITA-212ENST00000618207 COX7A2P14406 83 aa12.01□□□□□ -0.49
CIITA-212ENST00000618207 GGT1P19440 569 aa12.01□□□□□ -0.49
CIITA-212ENST00000618207 SOX9P48436 509 aa12.01□□□□□ -0.49
CIITA-212ENST00000618207 CHRNB3Q05901 458 aa12.01□□□□□ -0.49
CIITA-212ENST00000618207 ACSM2AQ08AH3 577 aa12.01□□□□□ -0.49
CIITA-212ENST00000618207 SP140Q13342 867 aa12.01□□□□□ -0.49
CIITA-212ENST00000618207 HKDC1Q2TB90 917 aa12.01□□□□□ -0.49
CIITA-212ENST00000618207 ACSM2BQ68CK6 577 aa12.01□□□□□ -0.49
CIITA-212ENST00000618207 FAM180BQ6P0A1 224 aa12.01□□□□□ -0.49
CIITA-212ENST00000618207 STK32CQ86UX6 486 aa12.01□□□□□ -0.49
CIITA-212ENST00000618207 C1orf52Q8N6N3 182 aaKnown RBP12.01□□□□□ -0.49
CIITA-212ENST00000618207 GLB1L3Q8NCI6 653 aaPredicted RBP12.01□□□□□ -0.49
CIITA-212ENST00000618207 ZNF548Q8NEK5 533 aaPredicted RBP12.01□□□□□ -0.49
CIITA-212ENST00000618207 ZNF480Q8WV37 535 aa12.01□□□□□ -0.49
CIITA-212ENST00000618207 FBXL8Q96CD0 374 aa12.01□□□□□ -0.49
CIITA-212ENST00000618207 CHFRQ96EP1 664 aa12.01□□□□□ -0.49
CIITA-212ENST00000618207 HIC2Q96JB3 615 aa12.01□□□□□ -0.49
CIITA-212ENST00000618207 PANX1Q96RD7 426 aa12.01□□□□□ -0.49
CIITA-212ENST00000618207 C9orf16Q9BUW7 83 aa12.01□□□□□ -0.49
CIITA-212ENST00000618207 ADI1Q9BV57 179 aa12.01□□□□□ -0.49
CIITA-212ENST00000618207 MTIF3Q9H2K0 278 aaKnown RBP12.01□□□□□ -0.49
CIITA-212ENST00000618207 LTB4R2Q9NPC1 389 aa12.01□□□□□ -0.49
CIITA-212ENST00000618207 TM7SF3Q9NS93 570 aa12.01□□□□□ -0.49
CIITA-212ENST00000618207 DKK3Q9UBP4 350 aa12.01□□□□□ -0.49
CIITA-212ENST00000618207 VPS29Q9UBQ0 182 aa12.01□□□□□ -0.49
CIITA-212ENST00000618207 CNOT11Q9UKZ1 510 aaKnown RBP12.01□□□□□ -0.49
CIITA-212ENST00000618207 YBX2Q9Y2T7 364 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms