RNA–Protein interactions for RNA: ENST00000617767.4

CPNE4-214, Transcript of copine 4, humanhuman

TSL 2 BASIC

Gene CPNE4, Length 3,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-214ENST00000617767 LINC00523Q86TU6 105 aa5.43□□□□□ -1.54
CPNE4-214ENST00000617767 HORMAD1Q86X24 394 aa5.43□□□□□ -1.54
CPNE4-214ENST00000617767 LYSMD2Q8IV50 215 aa5.43□□□□□ -1.54
CPNE4-214ENST00000617767 TRPV3Q8NET8 790 aa5.43□□□□□ -1.54
CPNE4-214ENST00000617767 OR4D10Q8NGI6 311 aa5.43□□□□□ -1.54
CPNE4-214ENST00000617767 HEXDCQ8WVB3 486 aa5.43□□□□□ -1.54
CPNE4-214ENST00000617767 RIPOR3Q96MK2 946 aa5.43□□□□□ -1.54
CPNE4-214ENST00000617767 NAT9Q9BTE0 207 aa5.43□□□□□ -1.54
CPNE4-214ENST00000617767 CWH43Q9H720 699 aa5.43□□□□□ -1.54
CPNE4-214ENST00000617767 SYNDIG1Q9H7V2 258 aa5.43□□□□□ -1.54
CPNE4-214ENST00000617767 BRD9Q9H8M2 597 aa5.43□□□□□ -1.54
CPNE4-214ENST00000617767 DCDC2Q9UHG0 476 aa5.43□□□□□ -1.54
CPNE4-214ENST00000617767 TMPRSS11EQ9UL52 423 aa5.43□□□□□ -1.54
CPNE4-214ENST00000617767 ENTPD4Q9Y227 616 aa5.43□□□□□ -1.54
CPNE4-214ENST00000617767 ACOT9Q9Y305 439 aa5.43□□□□□ -1.54
CPNE4-214ENST00000617767 SLC9B1P1A6NJY1 282 aa5.42□□□□□ -1.54
CPNE4-214ENST00000617767 PER2O15055 1255 aa5.42□□□□□ -1.54
CPNE4-214ENST00000617767 TRIM24O15164 1050 aa5.42□□□□□ -1.54
CPNE4-214ENST00000617767 AKR7A2O43488 359 aa5.42□□□□□ -1.54
CPNE4-214ENST00000617767 TNFRSF21O75509 655 aa5.42□□□□□ -1.54
CPNE4-214ENST00000617767 STC2O76061 302 aa5.42□□□□□ -1.54
CPNE4-214ENST00000617767 LTA4HP09960 611 aaKnown RBP5.42□□□□□ -1.54
CPNE4-214ENST00000617767 F8A1P23610 371 aa5.42□□□□□ -1.54
CPNE4-214ENST00000617767 HTR3AP46098 478 aa5.42□□□□□ -1.54
CPNE4-214ENST00000617767 SLC11A2P49281 568 aa5.42□□□□□ -1.54
CPNE4-214ENST00000617767 HOXA1P49639 335 aaPredicted RBP5.42□□□□□ -1.54
CPNE4-214ENST00000617767 CASP6P55212 293 aa5.42□□□□□ -1.54
CPNE4-214ENST00000617767 RAB14P61106 215 aa5.42□□□□□ -1.54
CPNE4-214ENST00000617767 GABREP78334 506 aa5.42□□□□□ -1.54
CPNE4-214ENST00000617767 GRSF1Q12849 480 aaKnown RBP eCLIP5.42□□□□□ -1.54
CPNE4-214ENST00000617767 SERINC3Q13530 473 aa5.42□□□□□ -1.54
CPNE4-214ENST00000617767 CATSPEREQ5SY80 951 aa5.42□□□□□ -1.54
CPNE4-214ENST00000617767 NXNL2Q5VZ03 156 aa5.42□□□□□ -1.54
CPNE4-214ENST00000617767 PDPK2PQ6A1A2 396 aa5.42□□□□□ -1.54
CPNE4-214ENST00000617767 PYHIN1Q6K0P9 492 aa5.42□□□□□ -1.54
CPNE4-214ENST00000617767 TIGD7Q6NT04 549 aaPredicted RBP5.42□□□□□ -1.54
CPNE4-214ENST00000617767 SYCE2Q6PIF2 218 aa5.42□□□□□ -1.54
CPNE4-214ENST00000617767 MAVSQ7Z434 540 aa5.42□□□□□ -1.54
CPNE4-214ENST00000617767 SNX20Q7Z614 316 aa5.42□□□□□ -1.54
CPNE4-214ENST00000617767 CENPLQ8N0S6 344 aaPredicted RBP5.42□□□□□ -1.54
CPNE4-214ENST00000617767 ZNF527Q8NB42 609 aa5.42□□□□□ -1.54
CPNE4-214ENST00000617767 NANPQ8TBE9 248 aa5.42□□□□□ -1.54
CPNE4-214ENST00000617767 PIWIL2Q8TC59 973 aaKnown RBP5.42□□□□□ -1.54
CPNE4-214ENST00000617767 MCOLN3Q8TDD5 553 aa5.42□□□□□ -1.54
CPNE4-214ENST00000617767 RNF170Q96K19 258 aa5.42□□□□□ -1.54
CPNE4-214ENST00000617767 FYTTD1Q96QD9 318 aaKnown RBP5.42□□□□□ -1.54
CPNE4-214ENST00000617767 OR52B2Q96RD2 323 aa5.42□□□□□ -1.54
CPNE4-214ENST00000617767 VAT1Q99536 393 aa5.42□□□□□ -1.54
CPNE4-214ENST00000617767 GDF15Q99988 308 aa5.42□□□□□ -1.54
CPNE4-214ENST00000617767 TRIM62Q9BVG3 475 aa5.42□□□□□ -1.54
CPNE4-214ENST00000617767 GATA5Q9BWX5 397 aaPredicted RBP5.42□□□□□ -1.54
CPNE4-214ENST00000617767 POLE3Q9NRF9 147 aa5.42□□□□□ -1.54
CPNE4-214ENST00000617767 SMOXQ9NWM0 555 aa5.42□□□□□ -1.54
CPNE4-214ENST00000617767 HPF1Q9NWY4 346 aa5.42□□□□□ -1.54
CPNE4-214ENST00000617767 CXXC1Q9P0U4 656 aaPredicted RBP5.42□□□□□ -1.54
CPNE4-214ENST00000617767 GIMAP2Q9UG22 337 aa5.42□□□□□ -1.54
CPNE4-214ENST00000617767 WARS2Q9UGM6 360 aaKnown RBP5.42□□□□□ -1.54
CPNE4-214ENST00000617767 TRMT6Q9UJA5 497 aaKnown RBP5.42□□□□□ -1.54
CPNE4-214ENST00000617767 SLC6A14Q9UN76 642 aa5.42□□□□□ -1.54
CPNE4-214ENST00000617767 ANAPC1Q9H1A4 1944 aa5.42□□□□□ -1.54
CPNE4-214ENST00000617767 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.42□□□□□ -1.54
CPNE4-214ENST00000617767 TMEM238LA0A1B0GVL6 79 aa5.42□□□□□ -1.54
CPNE4-214ENST00000617767 PMS2P1A4D2B8 440 aa5.42□□□□□ -1.54
CPNE4-214ENST00000617767 POM121CA8CG34 1229 aa5.42□□□□□ -1.54
CPNE4-214ENST00000617767 ERI2A8K979 691 aaKnown RBP5.42□□□□□ -1.54
CPNE4-214ENST00000617767 H7C4K7 107 aa5.42□□□□□ -1.54
CPNE4-214ENST00000617767 PPP6CO00743 305 aa5.42□□□□□ -1.54
CPNE4-214ENST00000617767 INSIG1O15503 277 aa5.42□□□□□ -1.54
CPNE4-214ENST00000617767 CFLARO15519 480 aa5.42□□□□□ -1.54
CPNE4-214ENST00000617767 ARHGEF9O43307 516 aa5.42□□□□□ -1.54
CPNE4-214ENST00000617767 OR1I1O60431 355 aa5.42□□□□□ -1.54
CPNE4-214ENST00000617767 SNAPINO95295 136 aa5.42□□□□□ -1.54
CPNE4-214ENST00000617767 SIX3O95343 332 aaPredicted RBP5.42□□□□□ -1.54
CPNE4-214ENST00000617767 PRAMEF12O95522 483 aa5.42□□□□□ -1.54
CPNE4-214ENST00000617767 TSHRP16473 764 aa5.42□□□□□ -1.54
CPNE4-214ENST00000617767 HMGA1P17096 107 aaKnown RBP5.42□□□□□ -1.54
CPNE4-214ENST00000617767 POU1F1P28069 291 aa5.42□□□□□ -1.54
CPNE4-214ENST00000617767 DGKQP52824 942 aa5.42□□□□□ -1.54
CPNE4-214ENST00000617767 AP1S2P56377 157 aa5.42□□□□□ -1.54
CPNE4-214ENST00000617767 ILF2Q12905 390 aaKnown RBP5.42□□□□□ -1.54
CPNE4-214ENST00000617767 ZNF177Q13360 481 aaPredicted RBP5.42□□□□□ -1.54
CPNE4-214ENST00000617767 CDH18Q13634 790 aa5.42□□□□□ -1.54
CPNE4-214ENST00000617767 RIN1Q13671 783 aa5.42□□□□□ -1.54
CPNE4-214ENST00000617767 FLOT2Q14254 428 aa5.42□□□□□ -1.54
CPNE4-214ENST00000617767 ZNF273Q14593 569 aa5.42□□□□□ -1.54
CPNE4-214ENST00000617767 ARL13AQ5H913 290 aaPredicted RBP5.42□□□□□ -1.54
CPNE4-214ENST00000617767 ARMC12Q5T9G4 340 aa5.42□□□□□ -1.54
CPNE4-214ENST00000617767 PLPP4Q5VZY2 271 aa5.42□□□□□ -1.54
CPNE4-214ENST00000617767 STEAP3Q658P3 488 aa5.42□□□□□ -1.54
CPNE4-214ENST00000617767 SLC6A19Q695T7 634 aa5.42□□□□□ -1.54
CPNE4-214ENST00000617767 C5orf46Q6UWT4 87 aa5.42□□□□□ -1.54
CPNE4-214ENST00000617767 SCML4Q8N228 414 aa5.42□□□□□ -1.54
CPNE4-214ENST00000617767 NAT16Q8N8M0 369 aa5.42□□□□□ -1.54
CPNE4-214ENST00000617767 TDRD5Q8NAT2 981 aaKnown RBP5.42□□□□□ -1.54
CPNE4-214ENST00000617767 OR4K2Q8NGD2 314 aa5.42□□□□□ -1.54
CPNE4-214ENST00000617767 OR13J1Q8NGT2 312 aa5.42□□□□□ -1.54
CPNE4-214ENST00000617767 ZNF461Q8TAF7 563 aa5.42□□□□□ -1.54
CPNE4-214ENST00000617767 CA5BP1Q8WTZ4 195 aa5.42□□□□□ -1.54
CPNE4-214ENST00000617767 DEDD2Q8WXF8 326 aa5.42□□□□□ -1.54
CPNE4-214ENST00000617767 SPACA7Q96KW9 195 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms