RNA–Protein interactions for RNA: ENST00000617339.4

SHROOM1-208, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 3,638 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-208ENST00000617339 LAPTM4AQ15012 233 aa14.09□□□□□ -0.15
SHROOM1-208ENST00000617339 C2orf27AQ580R0 203 aa14.09□□□□□ -0.15
SHROOM1-208ENST00000617339 HS3ST5Q8IZT8 346 aa14.09□□□□□ -0.15
SHROOM1-208ENST00000617339 DACH2Q96NX9 599 aa14.09□□□□□ -0.15
SHROOM1-208ENST00000617339 SMURF2Q9HAU4 748 aa14.09□□□□□ -0.15
SHROOM1-208ENST00000617339 COMMD8Q9NX08 183 aa14.09□□□□□ -0.15
SHROOM1-208ENST00000617339 ANAPC2Q9UJX6 822 aa14.09□□□□□ -0.15
SHROOM1-208ENST00000617339 ZNF821O75541 412 aaPredicted RBP14.08□□□□□ -0.15
SHROOM1-208ENST00000617339 EPB42P16452 691 aa14.08□□□□□ -0.15
SHROOM1-208ENST00000617339 FSHRP23945 695 aa14.08□□□□□ -0.15
SHROOM1-208ENST00000617339 SLC6A2P23975 617 aa14.08□□□□□ -0.15
SHROOM1-208ENST00000617339 SMUG1Q53HV7 270 aa14.08□□□□□ -0.15
SHROOM1-208ENST00000617339 GPRC6AQ5T6X5 926 aa14.08□□□□□ -0.15
SHROOM1-208ENST00000617339 ATAD3BQ5T9A4 648 aa14.08□□□□□ -0.15
SHROOM1-208ENST00000617339 XAF1Q6GPH4 301 aa14.08□□□□□ -0.15
SHROOM1-208ENST00000617339 FAM109BQ6ICB4 259 aaPredicted RBP14.08□□□□□ -0.15
SHROOM1-208ENST00000617339 ADNP2Q6IQ32 1131 aa14.08□□□□□ -0.15
SHROOM1-208ENST00000617339 TRMT11Q7Z4G4 463 aaKnown RBP14.08□□□□□ -0.15
SHROOM1-208ENST00000617339 NXPE1Q8N323 547 aa14.08□□□□□ -0.15
SHROOM1-208ENST00000617339 LIX1Q8N485 282 aa14.08□□□□□ -0.15
SHROOM1-208ENST00000617339 ITFG1Q8TB96 612 aa14.08□□□□□ -0.15
SHROOM1-208ENST00000617339 TRIM54Q9BYV2 358 aa14.08□□□□□ -0.15
SHROOM1-208ENST00000617339 ELOVL6Q9H5J4 265 aa14.08□□□□□ -0.15
SHROOM1-208ENST00000617339 CD320Q9NPF0 282 aa14.08□□□□□ -0.15
SHROOM1-208ENST00000617339 SCHIP1Q9P0W5 487 aaPredicted RBP14.08□□□□□ -0.15
SHROOM1-208ENST00000617339 OR7A17O14581 309 aa14.08□□□□□ -0.16
SHROOM1-208ENST00000617339 TAPBPO15533 448 aa14.08□□□□□ -0.16
SHROOM1-208ENST00000617339 SEC14L2O76054 403 aa14.08□□□□□ -0.16
SHROOM1-208ENST00000617339 MLYCDO95822 493 aa14.08□□□□□ -0.16
SHROOM1-208ENST00000617339 C1QCP02747 245 aa14.08□□□□□ -0.16
SHROOM1-208ENST00000617339 ABCB1P08183 1280 aaPredicted RBP14.08□□□□□ -0.16
SHROOM1-208ENST00000617339 TGFBR1P36897 503 aa14.08□□□□□ -0.16
SHROOM1-208ENST00000617339 GSK3BP49841 420 aa14.08□□□□□ -0.16
SHROOM1-208ENST00000617339 OR4D2P58180 307 aa14.08□□□□□ -0.16
SHROOM1-208ENST00000617339 COPZ1P61923 177 aa14.08□□□□□ -0.16
SHROOM1-208ENST00000617339 CCSMST1Q4G0I0 132 aa14.08□□□□□ -0.16
SHROOM1-208ENST00000617339 SPANXN4Q5MJ08 99 aa14.08□□□□□ -0.16
SHROOM1-208ENST00000617339 TMEM215Q68D42 235 aa14.08□□□□□ -0.16
SHROOM1-208ENST00000617339 HSD11B1LQ7Z5J1 315 aa14.08□□□□□ -0.16
SHROOM1-208ENST00000617339 ADAMTSL2Q86TH1 951 aa14.08□□□□□ -0.16
SHROOM1-208ENST00000617339 OR7A2PQ8NGA2 310 aa14.08□□□□□ -0.16
SHROOM1-208ENST00000617339 OR10A6Q8NH74 314 aa14.08□□□□□ -0.16
SHROOM1-208ENST00000617339 IRF7Q92985 503 aa14.08□□□□□ -0.16
SHROOM1-208ENST00000617339 TOX2Q96NM4 488 aa14.08□□□□□ -0.16
SHROOM1-208ENST00000617339 ALG2Q9H553 416 aa14.08□□□□□ -0.16
SHROOM1-208ENST00000617339 GAPDHSO14556 408 aaPredicted RBP14.08□□□□□ -0.16
SHROOM1-208ENST00000617339 DFNA5O60443 496 aa14.08□□□□□ -0.16
SHROOM1-208ENST00000617339 GUCY1B2O75343 617 aa14.08□□□□□ -0.16
SHROOM1-208ENST00000617339 EPHX1P07099 455 aa14.08□□□□□ -0.16
SHROOM1-208ENST00000617339 CTSAP10619 480 aa14.08□□□□□ -0.16
SHROOM1-208ENST00000617339 BMP4P12644 408 aa14.08□□□□□ -0.16
SHROOM1-208ENST00000617339 ACRV1P26436 265 aa14.08□□□□□ -0.16
SHROOM1-208ENST00000617339 PTCHD3Q3KNS1 767 aa14.08□□□□□ -0.16
SHROOM1-208ENST00000617339 UBE2UQ5VVX9 321 aa14.08□□□□□ -0.16
SHROOM1-208ENST00000617339 CYP20A1Q6UW02 462 aa14.08□□□□□ -0.16
SHROOM1-208ENST00000617339 AKAP14Q86UN6 197 aa14.08□□□□□ -0.16
SHROOM1-208ENST00000617339 SPARTQ8N0X7 666 aa14.08□□□□□ -0.16
SHROOM1-208ENST00000617339 SUSD6Q92537 303 aa14.08□□□□□ -0.16
SHROOM1-208ENST00000617339 CHID1Q9BWS9 393 aa14.08□□□□□ -0.16
SHROOM1-208ENST00000617339 WBP1LQ9NX94 342 aa14.08□□□□□ -0.16
SHROOM1-208ENST00000617339 STK16O75716 305 aa14.07□□□□□ -0.16
SHROOM1-208ENST00000617339 CPSF4O95639 269 aaKnown RBP14.07□□□□□ -0.16
SHROOM1-208ENST00000617339 NTRK1P04629 796 aa14.07□□□□□ -0.16
SHROOM1-208ENST00000617339 RFC2P35250 354 aa14.07□□□□□ -0.16
SHROOM1-208ENST00000617339 MEF2AQ02078 507 aaPredicted RBP14.07□□□□□ -0.16
SHROOM1-208ENST00000617339 PRKG2Q13237 762 aa14.07□□□□□ -0.16
SHROOM1-208ENST00000617339 PAGE2Q7Z2X7 111 aa14.07□□□□□ -0.16
SHROOM1-208ENST00000617339 ITCHQ96J02 903 aa14.07□□□□□ -0.16
SHROOM1-208ENST00000617339 DPY30Q9C005 99 aa14.07□□□□□ -0.16
SHROOM1-208ENST00000617339 PRDM8Q9NQV8 689 aa14.07□□□□□ -0.16
SHROOM1-208ENST00000617339 DEC1Q9P2X7 70 aa14.07□□□□□ -0.16
SHROOM1-208ENST00000617339 B3GNT3Q9Y2A9 372 aa14.07□□□□□ -0.16
SHROOM1-208ENST00000617339 ANKRD34BA5PLL1 514 aa14.07□□□□□ -0.16
SHROOM1-208ENST00000617339 GNGT2O14610 69 aa14.07□□□□□ -0.16
SHROOM1-208ENST00000617339 ABCB7O75027 752 aa14.07□□□□□ -0.16
SHROOM1-208ENST00000617339 ARHGEF15O94989 841 aa14.07□□□□□ -0.16
SHROOM1-208ENST00000617339 RPS17P08708 135 aaKnown RBP14.07□□□□□ -0.16
SHROOM1-208ENST00000617339 BMPR1AP36894 532 aa14.07□□□□□ -0.16
SHROOM1-208ENST00000617339 GRSF1Q12849 480 aaKnown RBP eCLIP14.07□□□□□ -0.16
SHROOM1-208ENST00000617339 CARD16Q5EG05 197 aa14.07□□□□□ -0.16
SHROOM1-208ENST00000617339 PROKR1Q8TCW9 393 aa14.07□□□□□ -0.16
SHROOM1-208ENST00000617339 ALOXE3Q9BYJ1 711 aa14.07□□□□□ -0.16
SHROOM1-208ENST00000617339 PTPRZ1P23471 2315 aaPredicted RBP14.07□□□□□ -0.16
SHROOM1-208ENST00000617339 SNPHO15079 494 aa14.07□□□□□ -0.16
SHROOM1-208ENST00000617339 DEAF1O75398 565 aaPredicted RBP14.07□□□□□ -0.16
SHROOM1-208ENST00000617339 TCF3P15923 654 aa14.07□□□□□ -0.16
SHROOM1-208ENST00000617339 CCDC85BQ15834 202 aaPredicted RBP14.07□□□□□ -0.16
SHROOM1-208ENST00000617339 C5orf22Q49AR2 442 aa14.07□□□□□ -0.16
SHROOM1-208ENST00000617339 PSRC1Q6PGN9 363 aaPredicted RBP14.07□□□□□ -0.16
SHROOM1-208ENST00000617339 SPRED1Q7Z699 444 aa14.07□□□□□ -0.16
SHROOM1-208ENST00000617339 RGL4Q8IZJ4 473 aa14.07□□□□□ -0.16
SHROOM1-208ENST00000617339 STK40Q8N2I9 435 aa14.07□□□□□ -0.16
SHROOM1-208ENST00000617339 POC5Q8NA72 575 aa14.07□□□□□ -0.16
SHROOM1-208ENST00000617339 OVCA2Q8WZ82 227 aa14.07□□□□□ -0.16
SHROOM1-208ENST00000617339 TRMT2BQ96GJ1 504 aaKnown RBP14.07□□□□□ -0.16
SHROOM1-208ENST00000617339 CTRCQ99895 268 aa14.07□□□□□ -0.16
SHROOM1-208ENST00000617339 HTATIP2Q9BUP3 242 aa14.07□□□□□ -0.16
SHROOM1-208ENST00000617339 WDR12Q9GZL7 423 aaKnown RBP14.07□□□□□ -0.16
SHROOM1-208ENST00000617339 PARVBQ9HBI1 364 aa14.07□□□□□ -0.16
SHROOM1-208ENST00000617339 GPR45Q9Y5Y3 372 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms