RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 TEAD4Q15561 434 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 PLPP4Q5VZY2 271 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 CXorf57Q6NSI4 855 aaKnown RBP5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 GDPD4Q6W3E5 623 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 PHYKPLQ8IUZ5 450 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 SVOPLQ8N434 492 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 C2orf73Q8N5S3 287 aaPredicted RBP5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 IRF7Q92985 503 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 FATE1Q969F0 183 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 MYEOVQ96EZ4 313 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 MYOCQ99972 504 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 COPS4Q9BT78 406 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 KLHL25Q9H0H3 589 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 MARCH5Q9NX47 278 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 ABCA4P78363 2273 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 OR10H3O60404 316 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 PRMT3O60678 531 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 EFCAB14O75071 495 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 SRCP12931 536 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 ANXA8P13928 327 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 TYRP14679 529 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 ITGA2P17301 1181 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 ENGP17813 658 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 C1DQ13901 141 aaKnown RBP5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 ZNF829Q3KNS6 432 aaPredicted RBP5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 KANK2Q63ZY3 851 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 MED27Q6P2C8 311 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 LRRC70Q7Z2Q7 622 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 PAGE2Q7Z2X7 111 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 DEPDC4Q8N2C3 294 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 ING5Q8WYH8 240 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 HSPBAP1Q96EW2 488 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 PDLIM5Q96HC4 596 aaKnown RBP5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 TEX37Q96LM6 180 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 KCNH6Q9H252 994 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 KAT8Q9H7Z6 458 aaKnown RBP5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 TRIM45Q9H8W5 580 aaPredicted RBP5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 GIMAP4Q9NUV9 329 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 COL24A1Q17RW2 1714 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 XIRP1Q702N8 1843 aaKnown RBP5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 E2F3O00716 465 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 TSPAN6O43657 245 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 PCDH7O60245 1069 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 KRT75O95678 551 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 PTPN2P17706 415 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 RFX3P48380 749 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 CLCN2P51788 898 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 MRPL58Q14197 206 aaKnown RBP5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 FNDC3BQ53EP0 1204 aaKnown RBP5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 CRTC1Q6UUV9 634 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 RD3Q7Z3Z2 195 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 TICAM1Q8IUC6 712 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 SLC39A11Q8N1S5 342 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 CHST14Q8NCH0 376 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 TFGQ92734 400 aaPredicted RBP5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 MAGEB10Q96LZ2 347 aaPredicted RBP5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 BBS4Q96RK4 519 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 PKMYT1Q99640 499 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 TCF25Q9BQ70 676 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 ABCB10Q9NRK6 738 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 IMP3Q9NV31 184 aaKnown RBP5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 DAPK2Q9UIK4 370 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 USP22Q9UPT9 525 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 NOTCH3Q9UM47 2321 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 GRXCR2A6NFK2 248 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 TNFRSF11BO00300 401 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 KPNA4O00629 521 aaPredicted RBP5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 TRIM24O15164 1050 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 NDUFS2O75306 463 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 TSPAN12O95859 305 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 TGFB1P01137 390 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 GBAP04062 536 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 EPHX1P07099 455 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 MMP2P08253 660 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 TNNI3P19429 210 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 GRIA2P42262 883 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 WASP42768 502 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 ANXA11P50995 505 aaKnown RBP5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 MANFP55145 182 aaKnown RBP5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 SLBPQ14493 270 aaKnown RBP eCLIP5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 CCDC85BQ15834 202 aaPredicted RBP5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 EGFLAMQ63HQ2 1017 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 ZNF773Q6PK81 442 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 CASP12Q6UXS9 341 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.48□□□□□ -1.534e-6■■■■□ 19.8
SYNCRIP-204ENST00000616122 SLCO6A1Q86UG4 719 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 C11orf74Q86VG3 221 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 ZZZ3Q8IYH5 903 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 FIBINQ8TAL6 211 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 ZNF641Q96N77 438 aaPredicted RBP5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 CCDC177Q9NQR7 707 aaPredicted RBP5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 FARSBQ9NSD9 589 aaKnown RBP5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 FAM120CQ9NX05 1096 aaKnown RBP5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 TRPS1Q9UHF7 1281 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 ZNF451Q9Y4E5 1061 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 PLCE1Q9P212 2302 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 THSD7AQ9UPZ6 1657 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 PNMA8CA0A1B0GUJ8 204 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 ABCB7O75027 752 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 RPN2P04844 631 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms