RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 GPR135Q8IZ08 494 aa16.05■□□□□ 0.16
CBWD3-211ENST00000615061 SPATA6LQ8N4H0 392 aa16.05■□□□□ 0.16
CBWD3-211ENST00000615061 ZNF655Q8N720 491 aaPredicted RBP16.05■□□□□ 0.16
CBWD3-211ENST00000615061 MR1Q95460 341 aa16.05■□□□□ 0.16
CBWD3-211ENST00000615061 ZUFSPQ96AP4 578 aa16.05■□□□□ 0.16
CBWD3-211ENST00000615061 MRRFQ96E11 262 aaKnown RBP16.05■□□□□ 0.16
CBWD3-211ENST00000615061 SLC45A3Q96JT2 553 aa16.05■□□□□ 0.16
CBWD3-211ENST00000615061 FMO2Q99518 471 aa16.05■□□□□ 0.16
CBWD3-211ENST00000615061 RHOXF2Q9BQY4 288 aa16.05■□□□□ 0.16
CBWD3-211ENST00000615061 CDC42EP4Q9H3Q1 356 aaKnown RBP16.05■□□□□ 0.16
CBWD3-211ENST00000615061 SYNPO2LQ9H987 977 aa16.05■□□□□ 0.16
CBWD3-211ENST00000615061 GPAMQ9HCL2 828 aa16.05■□□□□ 0.16
CBWD3-211ENST00000615061 MRPS30Q9NP92 439 aaKnown RBP16.05■□□□□ 0.16
CBWD3-211ENST00000615061 STARD5Q9NSY2 213 aa16.05■□□□□ 0.16
CBWD3-211ENST00000615061 INTS7Q9NVH2 962 aaKnown RBP16.05■□□□□ 0.16
CBWD3-211ENST00000615061 IRAK4Q9NWZ3 460 aa16.05■□□□□ 0.16
CBWD3-211ENST00000615061 UTP6Q9NYH9 597 aaKnown RBP16.05■□□□□ 0.16
CBWD3-211ENST00000615061 A0A0J9YVX5 310 aa16.05■□□□□ 0.16
CBWD3-211ENST00000615061 MEN1O00255 615 aa16.05■□□□□ 0.16
CBWD3-211ENST00000615061 CDC7O00311 574 aa16.05■□□□□ 0.16
CBWD3-211ENST00000615061 SLC16A5O15375 505 aa16.05■□□□□ 0.16
CBWD3-211ENST00000615061 KATNA1O75449 491 aa16.05■□□□□ 0.16
CBWD3-211ENST00000615061 CMPK1P30085 196 aa16.05■□□□□ 0.16
CBWD3-211ENST00000615061 HSD17B2P37059 387 aa16.05■□□□□ 0.16
CBWD3-211ENST00000615061 ATP1A1-AS1Q5TC04 95 aa16.05■□□□□ 0.16
CBWD3-211ENST00000615061 THEMIS2Q5TEJ8 643 aa16.05■□□□□ 0.16
CBWD3-211ENST00000615061 ICE2Q659A1 982 aa16.05■□□□□ 0.16
CBWD3-211ENST00000615061 FRMPD2BQ6IN97 320 aa16.05■□□□□ 0.16
CBWD3-211ENST00000615061 PCSK4Q6UW60 755 aa16.05■□□□□ 0.16
CBWD3-211ENST00000615061 SBSNQ6UWP8 590 aa16.05■□□□□ 0.16
CBWD3-211ENST00000615061 ZNF517Q6ZMY9 492 aaPredicted RBP16.05■□□□□ 0.16
CBWD3-211ENST00000615061 DSELQ8IZU8 1212 aa16.05■□□□□ 0.16
CBWD3-211ENST00000615061 STARD8Q92502 1023 aa16.05■□□□□ 0.16
CBWD3-211ENST00000615061 PDLIM5Q96HC4 596 aaKnown RBP16.05■□□□□ 0.16
CBWD3-211ENST00000615061 CCDC138Q96M89 665 aa16.05■□□□□ 0.16
CBWD3-211ENST00000615061 GPR22Q99680 433 aa16.05■□□□□ 0.16
CBWD3-211ENST00000615061 CHST8Q9H2A9 424 aa16.05■□□□□ 0.16
CBWD3-211ENST00000615061 CUEDC1Q9NWM3 386 aaPredicted RBP16.05■□□□□ 0.16
CBWD3-211ENST00000615061 DHCR7Q9UBM7 475 aaKnown RBP16.05■□□□□ 0.16
CBWD3-211ENST00000615061 MED13Q9UHV7 2174 aa16.04■□□□□ 0.16
CBWD3-211ENST00000615061 NPEPPSL1A6NEC2 478 aa16.04■□□□□ 0.16
CBWD3-211ENST00000615061 ZNF839A8K0R7 811 aa16.04■□□□□ 0.16
CBWD3-211ENST00000615061 TARM1B6A8C7 271 aa16.04■□□□□ 0.16
CBWD3-211ENST00000615061 ZSCAN9O15535 394 aaPredicted RBP16.04■□□□□ 0.16
CBWD3-211ENST00000615061 FKBP9O95302 570 aa16.04■□□□□ 0.16
CBWD3-211ENST00000615061 WISP3O95389 354 aaPredicted RBP16.04■□□□□ 0.16
CBWD3-211ENST00000615061 GUCA1CO95843 209 aa16.04■□□□□ 0.16
CBWD3-211ENST00000615061 PRKAR1AP10644 381 aa16.04■□□□□ 0.16
CBWD3-211ENST00000615061 RPS18P62269 152 aaKnown RBP16.04■□□□□ 0.16
CBWD3-211ENST00000615061 POU4F1Q01851 419 aa16.04■□□□□ 0.16
CBWD3-211ENST00000615061 PRDX1Q06830 199 aaKnown RBP16.04■□□□□ 0.16
CBWD3-211ENST00000615061 USP10Q14694 798 aaKnown RBP16.04■□□□□ 0.16
CBWD3-211ENST00000615061 C1orf189Q5VU69 101 aa16.04■□□□□ 0.16
CBWD3-211ENST00000615061 AGTRAPQ6RW13 159 aa16.04■□□□□ 0.16
CBWD3-211ENST00000615061 ZSCAN1Q8NBB4 408 aa16.04■□□□□ 0.16
CBWD3-211ENST00000615061 ALKBH8Q96BT7 664 aaKnown RBP16.04■□□□□ 0.16
CBWD3-211ENST00000615061 MED8Q96G25 268 aa16.04■□□□□ 0.16
CBWD3-211ENST00000615061 SLC7A5P2Q9GIP4 190 aa16.04■□□□□ 0.16
CBWD3-211ENST00000615061 ARL15Q9NXU5 204 aa16.04■□□□□ 0.16
CBWD3-211ENST00000615061 NFU1Q9UMS0 254 aa16.04■□□□□ 0.16
CBWD3-211ENST00000615061 SH2B3Q9UQQ2 575 aa16.04■□□□□ 0.16
CBWD3-211ENST00000615061 KLK4Q9Y5K2 254 aa16.04■□□□□ 0.16
CBWD3-211ENST00000615061 LOC105369274A0A096LPK9 316 aa16.03■□□□□ 0.16
CBWD3-211ENST00000615061 LOC102723532A0A0G2JNH3 316 aa16.03■□□□□ 0.16
CBWD3-211ENST00000615061 OR2A25A4D2G3 310 aa16.03■□□□□ 0.16
CBWD3-211ENST00000615061 ACSL3O95573 720 aa16.03■□□□□ 0.16
CBWD3-211ENST00000615061 SLC12A2P55011 1212 aa16.03■□□□□ 0.16
CBWD3-211ENST00000615061 NAE1Q13564 534 aa16.03■□□□□ 0.16
CBWD3-211ENST00000615061 DNASE1L3Q13609 305 aa16.03■□□□□ 0.16
CBWD3-211ENST00000615061 PPP1R3AQ16821 1122 aa16.03■□□□□ 0.16
CBWD3-211ENST00000615061 GRTP1Q5TC63 336 aa16.03■□□□□ 0.16
CBWD3-211ENST00000615061 FAM69BQ5VUD6 431 aa16.03■□□□□ 0.16
CBWD3-211ENST00000615061 FBXO42Q6P3S6 717 aa16.03■□□□□ 0.16
CBWD3-211ENST00000615061 RELL1Q8IUW5 271 aa16.03■□□□□ 0.16
CBWD3-211ENST00000615061 OR4N4Q8N0Y3 316 aa16.03■□□□□ 0.16
CBWD3-211ENST00000615061 NKAPQ8N5F7 415 aaKnown RBP16.03■□□□□ 0.16
CBWD3-211ENST00000615061 PYCR2Q96C36 320 aa16.03■□□□□ 0.16
CBWD3-211ENST00000615061 FAM129AQ9BZQ8 928 aa16.03■□□□□ 0.16
CBWD3-211ENST00000615061 CCDC177Q9NQR7 707 aaPredicted RBP16.03■□□□□ 0.16
CBWD3-211ENST00000615061 COL6A6A6NMZ7 2263 aa16.03■□□□□ 0.16
CBWD3-211ENST00000615061 KLK3P07288 261 aaPredicted RBP16.03■□□□□ 0.16
CBWD3-211ENST00000615061 HIST1H2AGP0C0S8 130 aaPredicted RBP16.03■□□□□ 0.16
CBWD3-211ENST00000615061 HIST1H2ADP20671 130 aa16.03■□□□□ 0.16
CBWD3-211ENST00000615061 SPRP35270 261 aaPredicted RBP16.03■□□□□ 0.16
CBWD3-211ENST00000615061 VSX2P58304 361 aaPredicted RBP16.03■□□□□ 0.16
CBWD3-211ENST00000615061 NFKB2Q00653 900 aa16.03■□□□□ 0.16
CBWD3-211ENST00000615061 SLMAPQ14BN4 828 aa16.03■□□□□ 0.16
CBWD3-211ENST00000615061 TSNQ15631 228 aaKnown RBP16.03■□□□□ 0.16
CBWD3-211ENST00000615061 PRAMEF13Q5VWM6 474 aa16.03■□□□□ 0.16
CBWD3-211ENST00000615061 ZNF385CQ66K41 422 aaPredicted RBP16.03■□□□□ 0.16
CBWD3-211ENST00000615061 C16orf46Q6P387 395 aa16.03■□□□□ 0.16
CBWD3-211ENST00000615061 CMC1Q7Z7K0 106 aa16.03■□□□□ 0.16
CBWD3-211ENST00000615061 PAQR7Q86WK9 346 aa16.03■□□□□ 0.16
CBWD3-211ENST00000615061 PLD3Q8IV08 490 aa16.03■□□□□ 0.16
CBWD3-211ENST00000615061 DTWD1Q8N5C7 304 aa16.03■□□□□ 0.16
CBWD3-211ENST00000615061 TTC9Q92623 222 aa16.03■□□□□ 0.16
CBWD3-211ENST00000615061 EXTL1Q92935 676 aa16.03■□□□□ 0.16
CBWD3-211ENST00000615061 HIST1H2AHQ96KK5 128 aa16.03■□□□□ 0.16
CBWD3-211ENST00000615061 LRFN5Q96NI6 719 aa16.03■□□□□ 0.16
CBWD3-211ENST00000615061 HIST1H2AJQ99878 128 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms