RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 SYTL1Q8IYJ3 562 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 PLD6Q8N2A8 252 aaKnown RBP5.47□□□□□ -1.53
CPNE3-208ENST00000614678 MR1Q95460 341 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 TUBB2BQ9BVA1 445 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 C12orf65Q9H3J6 166 aaKnown RBP5.47□□□□□ -1.53
CPNE3-208ENST00000614678 ZBTB20Q9HC78 741 aaPredicted RBP5.47□□□□□ -1.53
CPNE3-208ENST00000614678 NINJ2Q9NZG7 142 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 BTRCQ9Y297 605 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 CENPEQ02224 2701 aa5.46□□□□□ -1.53
CPNE3-208ENST00000614678 LRRK2Q5S007 2527 aa5.46□□□□□ -1.53
CPNE3-208ENST00000614678 SPTAN1Q13813 2472 aaKnown RBP5.46□□□□□ -1.53
CPNE3-208ENST00000614678 GSTM1P09488 218 aa5.46□□□□□ -1.54
CPNE3-208ENST00000614678 ZNF37AP17032 561 aaPredicted RBP5.46□□□□□ -1.54
CPNE3-208ENST00000614678 SHMT2P34897 504 aa5.46□□□□□ -1.54
CPNE3-208ENST00000614678 AGTR2P50052 363 aa5.46□□□□□ -1.54
CPNE3-208ENST00000614678 GSTM4Q03013 218 aa5.46□□□□□ -1.54
CPNE3-208ENST00000614678 NAE1Q13564 534 aa5.46□□□□□ -1.54
CPNE3-208ENST00000614678 UAP1Q16222 522 aaPredicted RBP5.46□□□□□ -1.54
CPNE3-208ENST00000614678 MLIPQ5VWP3 458 aa5.46□□□□□ -1.54
CPNE3-208ENST00000614678 C6orf15Q6UXA7 325 aaPredicted RBP5.46□□□□□ -1.54
CPNE3-208ENST00000614678 CEACAM20Q6UY09 585 aa5.46□□□□□ -1.54
CPNE3-208ENST00000614678 PALM2Q8IXS6 379 aa5.46□□□□□ -1.54
CPNE3-208ENST00000614678 ENDOVQ8N8Q3 282 aaKnown RBP5.46□□□□□ -1.54
CPNE3-208ENST00000614678 OR9A1PQ8NGU1 263 aa5.46□□□□□ -1.54
CPNE3-208ENST00000614678 OR2L8Q8NGY9 312 aa5.46□□□□□ -1.54
CPNE3-208ENST00000614678 RBCK1Q9BYM8 510 aa5.46□□□□□ -1.54
CPNE3-208ENST00000614678 AICDAQ9GZX7 198 aa5.46□□□□□ -1.54
CPNE3-208ENST00000614678 CDC42EP4Q9H3Q1 356 aaKnown RBP5.46□□□□□ -1.54
CPNE3-208ENST00000614678 PDE7BQ9NP56 450 aa5.46□□□□□ -1.54
CPNE3-208ENST00000614678 IRAK4Q9NWZ3 460 aa5.46□□□□□ -1.54
CPNE3-208ENST00000614678 OR6C2Q9NZP2 312 aa5.46□□□□□ -1.54
CPNE3-208ENST00000614678 WHRNQ9P202 907 aa5.46□□□□□ -1.54
CPNE3-208ENST00000614678 CTNNAL1Q9UBT7 734 aa5.46□□□□□ -1.54
CPNE3-208ENST00000614678 ACSL6Q9UKU0 697 aa5.46□□□□□ -1.54
CPNE3-208ENST00000614678 UTP11Q9Y3A2 253 aaKnown RBP5.46□□□□□ -1.54
CPNE3-208ENST00000614678 A0A0J9YY10 115 aa5.46□□□□□ -1.54
CPNE3-208ENST00000614678 OR2B3O76000 313 aa5.46□□□□□ -1.54
CPNE3-208ENST00000614678 GCAP28676 217 aa5.46□□□□□ -1.54
CPNE3-208ENST00000614678 HNF4AP41235 474 aa5.46□□□□□ -1.54
CPNE3-208ENST00000614678 PNLIPRP1P54315 467 aa5.46□□□□□ -1.54
CPNE3-208ENST00000614678 ITGA1P56199 1179 aa5.46□□□□□ -1.54
CPNE3-208ENST00000614678 TMPRSS3P57727 454 aa5.46□□□□□ -1.54
CPNE3-208ENST00000614678 MGAT5Q09328 741 aa5.46□□□□□ -1.54
CPNE3-208ENST00000614678 CALCOCO2Q13137 446 aa5.46□□□□□ -1.54
CPNE3-208ENST00000614678 TBR1Q16650 682 aa5.46□□□□□ -1.54
CPNE3-208ENST00000614678 PPP1R3AQ16821 1122 aa5.46□□□□□ -1.54
CPNE3-208ENST00000614678 DNAJC21Q5F1R6 531 aaKnown RBP5.46□□□□□ -1.54
CPNE3-208ENST00000614678 VWA2Q5GFL6 755 aa5.46□□□□□ -1.54
CPNE3-208ENST00000614678 FAM198BQ6UWH4 519 aa5.46□□□□□ -1.54
CPNE3-208ENST00000614678 PCGF5Q86SE9 256 aa5.46□□□□□ -1.54
CPNE3-208ENST00000614678 MCATQ8IVS2 390 aaKnown RBP5.46□□□□□ -1.54
CPNE3-208ENST00000614678 KCT2Q8NC54 265 aa5.46□□□□□ -1.54
CPNE3-208ENST00000614678 TCF12Q99081 682 aa5.46□□□□□ -1.54
CPNE3-208ENST00000614678 ASPSCR1Q9BZE9 553 aa5.46□□□□□ -1.54
CPNE3-208ENST00000614678 EPB41L4BQ9H329 900 aa5.46□□□□□ -1.54
CPNE3-208ENST00000614678 EURLQ9NYK6 297 aa5.46□□□□□ -1.54
CPNE3-208ENST00000614678 TRMT6Q9UJA5 497 aaKnown RBP5.46□□□□□ -1.54
CPNE3-208ENST00000614678 CSAG2Q9Y5P2 127 aa5.46□□□□□ -1.54
CPNE3-208ENST00000614678 A0A0G2JN53 185 aa5.46□□□□□ -1.54
CPNE3-208ENST00000614678 A0A1B0GTL3 188 aa5.46□□□□□ -1.54
CPNE3-208ENST00000614678 FAM187AA6NFU0 413 aa5.46□□□□□ -1.54
CPNE3-208ENST00000614678 ZNF860A6NHJ4 632 aa5.46□□□□□ -1.54
CPNE3-208ENST00000614678 A6NL46 340 aa5.46□□□□□ -1.54
CPNE3-208ENST00000614678 MYO1CO00159 1063 aa5.46□□□□□ -1.54
CPNE3-208ENST00000614678 KLF7O75840 302 aaPredicted RBP5.46□□□□□ -1.54
CPNE3-208ENST00000614678 VARSP26640 1264 aaKnown RBP5.46□□□□□ -1.54
CPNE3-208ENST00000614678 CD97P48960 835 aa5.46□□□□□ -1.54
CPNE3-208ENST00000614678 PDAP1Q13442 181 aaKnown RBP5.46□□□□□ -1.54
CPNE3-208ENST00000614678 WASHC2DQ5SRD0 308 aa5.46□□□□□ -1.54
CPNE3-208ENST00000614678 RIPOR1Q6ZS17 1223 aa5.46□□□□□ -1.54
CPNE3-208ENST00000614678 COX15Q7KZN9 410 aa5.46□□□□□ -1.54
CPNE3-208ENST00000614678 MAATS1Q7Z4T9 603 aa5.46□□□□□ -1.54
CPNE3-208ENST00000614678 ADCK2Q7Z695 626 aa5.46□□□□□ -1.54
CPNE3-208ENST00000614678 RBM12BQ8IXT5 1001 aaKnown RBP5.46□□□□□ -1.54
CPNE3-208ENST00000614678 SEC14L1Q92503 715 aa5.46□□□□□ -1.54
CPNE3-208ENST00000614678 SLC39A7Q92504 469 aa5.46□□□□□ -1.54
CPNE3-208ENST00000614678 INPP5DQ92835 1189 aa5.46□□□□□ -1.54
CPNE3-208ENST00000614678 RAD51AP1Q96B01 352 aa5.46□□□□□ -1.54
CPNE3-208ENST00000614678 C8orf44Q96CB5 159 aa5.46□□□□□ -1.54
CPNE3-208ENST00000614678 C10orf90Q96M02 699 aa5.46□□□□□ -1.54
CPNE3-208ENST00000614678 TTC1Q99614 292 aa5.46□□□□□ -1.54
CPNE3-208ENST00000614678 FAM167BQ9BTA0 163 aa5.46□□□□□ -1.54
CPNE3-208ENST00000614678 CCDC68Q9H2F9 335 aa5.46□□□□□ -1.54
CPNE3-208ENST00000614678 SOX17Q9H6I2 414 aaPredicted RBP5.46□□□□□ -1.54
CPNE3-208ENST00000614678 ACTR5Q9H9F9 607 aaPredicted RBP5.46□□□□□ -1.54
CPNE3-208ENST00000614678 AKAP7Q9P0M2 348 aaPredicted RBP5.46□□□□□ -1.54
CPNE3-208ENST00000614678 HEBP2Q9Y5Z4 205 aa5.46□□□□□ -1.54
CPNE3-208ENST00000614678 MYOCOSA0A1B0GUC4 107 aa5.45□□□□□ -1.54
CPNE3-208ENST00000614678 FAM159BA6NKW6 160 aa5.45□□□□□ -1.54
CPNE3-208ENST00000614678 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.45□□□□□ -1.54
CPNE3-208ENST00000614678 H0YGG7 62 aa5.45□□□□□ -1.54
CPNE3-208ENST00000614678 SMAPO00193 183 aa5.45□□□□□ -1.54
CPNE3-208ENST00000614678 WISP3O95389 354 aaPredicted RBP5.45□□□□□ -1.54
CPNE3-208ENST00000614678 CELA2AP08217 269 aa5.45□□□□□ -1.54
CPNE3-208ENST00000614678 ERGP11308 486 aa5.45□□□□□ -1.54
CPNE3-208ENST00000614678 ARF3P61204 181 aaPredicted RBP5.45□□□□□ -1.54
CPNE3-208ENST00000614678 OLR1P78380 273 aa5.45□□□□□ -1.54
CPNE3-208ENST00000614678 CSHL1Q14406 222 aa5.45□□□□□ -1.54
CPNE3-208ENST00000614678 FAAH2Q6GMR7 532 aa5.45□□□□□ -1.54
CPNE3-208ENST00000614678 ZNF517Q6ZMY9 492 aaPredicted RBP5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms