RNA–Protein interactions for RNA: ENST00000614478.1

GEN1-208, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

Gene GEN1, Length 1,864 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-208ENST00000614478 REP15Q6BDI9 236 aa17.13■□□□□ 0.33
GEN1-208ENST00000614478 SUSD1Q6UWL2 747 aa17.13■□□□□ 0.33
GEN1-208ENST00000614478 GCNT7Q6ZNI0 430 aa17.13■□□□□ 0.33
GEN1-208ENST00000614478 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.13■□□□□ 0.33
GEN1-208ENST00000614478 NEIL2Q969S2 332 aa17.13■□□□□ 0.33
GEN1-208ENST00000614478 C12orf66Q96MD2 445 aa17.13■□□□□ 0.33
GEN1-208ENST00000614478 WDR92Q96MX6 357 aa17.13■□□□□ 0.33
GEN1-208ENST00000614478 FRG2BQ96QU4 278 aa17.13■□□□□ 0.33
GEN1-208ENST00000614478 INSM2Q96T92 566 aaPredicted RBP17.13■□□□□ 0.33
GEN1-208ENST00000614478 ACPTQ9BZG2 426 aa17.13■□□□□ 0.33
GEN1-208ENST00000614478 TRIT1Q9H3H1 467 aaKnown RBP17.13■□□□□ 0.33
GEN1-208ENST00000614478 ANGPTL2Q9UKU9 493 aa17.13■□□□□ 0.33
GEN1-208ENST00000614478 POMPQ9Y244 141 aa17.13■□□□□ 0.33
GEN1-208ENST00000614478 PRR19A6NJB7 356 aa17.12■□□□□ 0.33
GEN1-208ENST00000614478 NR5A2O00482 541 aa17.12■□□□□ 0.33
GEN1-208ENST00000614478 NRP2O60462 931 aa17.12■□□□□ 0.33
GEN1-208ENST00000614478 IGHV4-34P06331 123 aa17.12■□□□□ 0.33
GEN1-208ENST00000614478 IDSP22304 550 aa17.12■□□□□ 0.33
GEN1-208ENST00000614478 HTR1BP28222 390 aa17.12■□□□□ 0.33
GEN1-208ENST00000614478 HOXA6P31267 233 aa17.12■□□□□ 0.33
GEN1-208ENST00000614478 UFM1P61960 85 aa17.12■□□□□ 0.33
GEN1-208ENST00000614478 AP2B1P63010 937 aa17.12■□□□□ 0.33
GEN1-208ENST00000614478 RPL38P63173 70 aaKnown RBP17.12■□□□□ 0.33
GEN1-208ENST00000614478 SMU1Q2TAY7 513 aa17.12■□□□□ 0.33
GEN1-208ENST00000614478 COQ5Q5HYK3 327 aa17.12■□□□□ 0.33
GEN1-208ENST00000614478 IL23RQ5VWK5 629 aa17.12■□□□□ 0.33
GEN1-208ENST00000614478 KIAA0895LQ68EN5 471 aa17.12■□□□□ 0.33
GEN1-208ENST00000614478 GRHL2Q6ISB3 625 aa17.12■□□□□ 0.33
GEN1-208ENST00000614478 DUS1LQ6P1R4 473 aaKnown RBP17.12■□□□□ 0.33
GEN1-208ENST00000614478 TBC1D21Q8IYX1 336 aa17.12■□□□□ 0.33
GEN1-208ENST00000614478 OR1E3Q8WZA6 343 aa17.12■□□□□ 0.33
GEN1-208ENST00000614478 SLC45A3Q96JT2 553 aa17.12■□□□□ 0.33
GEN1-208ENST00000614478 TEX37Q96LM6 180 aa17.12■□□□□ 0.33
GEN1-208ENST00000614478 OR2M4Q96R27 311 aa17.12■□□□□ 0.33
GEN1-208ENST00000614478 LRTM1Q9HBL6 345 aa17.12■□□□□ 0.33
GEN1-208ENST00000614478 CCDC177Q9NQR7 707 aaPredicted RBP17.12■□□□□ 0.33
GEN1-208ENST00000614478 POLR3HQ9Y535 204 aaPredicted RBP17.12■□□□□ 0.33
GEN1-208ENST00000614478 SPAG17Q6Q759 2223 aa17.12■□□□□ 0.33
GEN1-208ENST00000614478 C9JVG2 144 aa17.12■□□□□ 0.33
GEN1-208ENST00000614478 SEC22BO75396 215 aa17.12■□□□□ 0.33
GEN1-208ENST00000614478 SLC22A3O75751 556 aa17.12■□□□□ 0.33
GEN1-208ENST00000614478 KRT36O76013 467 aa17.12■□□□□ 0.33
GEN1-208ENST00000614478 G6PDP11413 515 aa17.12■□□□□ 0.33
GEN1-208ENST00000614478 OXTRP30559 389 aa17.12■□□□□ 0.33
GEN1-208ENST00000614478 HNF4AP41235 474 aa17.12■□□□□ 0.33
GEN1-208ENST00000614478 CCR5P51681 352 aa17.12■□□□□ 0.33
GEN1-208ENST00000614478 LRP8Q14114 963 aa17.12■□□□□ 0.33
GEN1-208ENST00000614478 CCDC6Q16204 474 aa17.12■□□□□ 0.33
GEN1-208ENST00000614478 PIGGQ5H8A4 983 aa17.12■□□□□ 0.33
GEN1-208ENST00000614478 BLOC1S3Q6QNY0 202 aa17.12■□□□□ 0.33
GEN1-208ENST00000614478 TMPRSS11BQ86T26 416 aa17.12■□□□□ 0.33
GEN1-208ENST00000614478 TMEM145Q8NBT3 493 aa17.12■□□□□ 0.33
GEN1-208ENST00000614478 ROPN1LQ96C74 230 aa17.12■□□□□ 0.33
GEN1-208ENST00000614478 PDXPQ96GD0 296 aa17.12■□□□□ 0.33
GEN1-208ENST00000614478 FERD3LQ96RJ6 166 aa17.12■□□□□ 0.33
GEN1-208ENST00000614478 LRFN3Q9BTN0 628 aa17.12■□□□□ 0.33
GEN1-208ENST00000614478 WSB2Q9NYS7 404 aaPredicted RBP17.12■□□□□ 0.33
GEN1-208ENST00000614478 ZIM2Q9NZV7 527 aa17.12■□□□□ 0.33
GEN1-208ENST00000614478 FBXO4Q9UKT5 387 aa17.12■□□□□ 0.33
GEN1-208ENST00000614478 C15orf41Q9Y2V0 281 aa17.12■□□□□ 0.33
GEN1-208ENST00000614478 NDUFAF1Q9Y375 327 aa17.12■□□□□ 0.33
GEN1-208ENST00000614478 DYRK1BQ9Y463 629 aa17.12■□□□□ 0.33
GEN1-208ENST00000614478 HS3ST3A1Q9Y663 406 aa17.12■□□□□ 0.33
GEN1-208ENST00000614478 SERTM1A2A2V5 107 aa17.11■□□□□ 0.33
GEN1-208ENST00000614478 H0Y3Z8 333 aa17.11■□□□□ 0.33
GEN1-208ENST00000614478 VARSP26640 1264 aaKnown RBP17.11■□□□□ 0.33
GEN1-208ENST00000614478 CASP2P42575 452 aa17.11■□□□□ 0.33
GEN1-208ENST00000614478 YPEL5P62699 121 aa17.11■□□□□ 0.33
GEN1-208ENST00000614478 MAD2L1Q13257 205 aaPredicted RBP17.11■□□□□ 0.33
GEN1-208ENST00000614478 ARHGAP19Q14CB8 494 aa17.11■□□□□ 0.33
GEN1-208ENST00000614478 CLCA4Q14CN2 919 aa17.11■□□□□ 0.33
GEN1-208ENST00000614478 CYP20A1Q6UW02 462 aa17.11■□□□□ 0.33
GEN1-208ENST00000614478 SLCO4C1Q6ZQN7 724 aa17.11■□□□□ 0.33
GEN1-208ENST00000614478 ZFAND4Q86XD8 727 aa17.11■□□□□ 0.33
GEN1-208ENST00000614478 C2orf73Q8N5S3 287 aaPredicted RBP17.11■□□□□ 0.33
GEN1-208ENST00000614478 PCYOX1LQ8NBM8 494 aa17.11■□□□□ 0.33
GEN1-208ENST00000614478 SETD7Q8WTS6 366 aaKnown RBP17.11■□□□□ 0.33
GEN1-208ENST00000614478 TSACCQ96A04 125 aaPredicted RBP17.11■□□□□ 0.33
GEN1-208ENST00000614478 CDRT15Q96T59 188 aa17.11■□□□□ 0.33
GEN1-208ENST00000614478 GPR174Q9BXC1 333 aa17.11■□□□□ 0.33
GEN1-208ENST00000614478 C1orf109Q9NX04 203 aa17.11■□□□□ 0.33
GEN1-208ENST00000614478 SH2B3Q9UQQ2 575 aa17.11■□□□□ 0.33
GEN1-208ENST00000614478 EIF3LQ9Y262 564 aaKnown RBP17.11■□□□□ 0.33
GEN1-208ENST00000614478 CACNA1HO95180 2353 aa17.11■□□□□ 0.33
GEN1-208ENST00000614478 FANCMQ8IYD8 2048 aa17.1■□□□□ 0.33
GEN1-208ENST00000614478 CCDC163A0A0D9SF12 145 aa17.1■□□□□ 0.33
GEN1-208ENST00000614478 H0YIV9 168 aa17.1■□□□□ 0.33
GEN1-208ENST00000614478 CFLARO15519 480 aa17.1■□□□□ 0.33
GEN1-208ENST00000614478 ERGP11308 486 aa17.1■□□□□ 0.33
GEN1-208ENST00000614478 CAPN3P20807 821 aa17.1■□□□□ 0.33
GEN1-208ENST00000614478 CD6P30203 668 aa17.1■□□□□ 0.33
GEN1-208ENST00000614478 THOP1P52888 689 aa17.1■□□□□ 0.33
GEN1-208ENST00000614478 E2F2Q14209 437 aa17.1■□□□□ 0.33
GEN1-208ENST00000614478 VPS26BQ4G0F5 336 aa17.1■□□□□ 0.33
GEN1-208ENST00000614478 CATSPEREQ5SY80 951 aa17.1■□□□□ 0.33
GEN1-208ENST00000614478 THEMIS2Q5TEJ8 643 aa17.1■□□□□ 0.33
GEN1-208ENST00000614478 RD3Q7Z3Z2 195 aa17.1■□□□□ 0.33
GEN1-208ENST00000614478 MAML2Q8IZL2 1156 aaPredicted RBP17.1■□□□□ 0.33
GEN1-208ENST00000614478 RNF175Q8N4F7 328 aa17.1■□□□□ 0.33
GEN1-208ENST00000614478 EFCAB3Q8N7B9 438 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms