RNA–Protein interactions for RNA: ENST00000613795.4

CLCN3-211, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,874 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-211ENST00000613795 AVL9Q8NBF6 648 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 SLC35B2Q8TB61 432 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 SNAPC3Q92966 411 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 CNDP2Q96KP4 475 aaKnown RBP6.72□□□□□ -1.33
CLCN3-211ENST00000613795 SEMA3CQ99985 751 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 RETREG1Q9H6L5 497 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 ENPP5Q9UJA9 477 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 NOCTQ9UK39 431 aaKnown RBP6.72□□□□□ -1.33
CLCN3-211ENST00000613795 CNTNAP1P78357 1384 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 TRAPPC13A5PLN9 417 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 MAGEB17A8MXT2 336 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 TSTD3H0UI37 97 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 SGCEO43556 437 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 KERAO60938 352 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 SLC25A12O75746 678 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 PAHP00439 452 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 GOT1P17174 413 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 SPAM1P38567 509 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 RFX3P48380 749 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 NRG1Q02297 640 aaPredicted RBP6.72□□□□□ -1.33
CLCN3-211ENST00000613795 XKR6Q5GH73 641 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 RABL3Q5HYI8 236 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 LRRC66Q68CR7 880 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 ZNF730Q6ZMV8 503 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 LRRC69Q6ZNQ3 347 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 PAQR7Q86WK9 346 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 XYLT1Q86Y38 959 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 RPLP0P6Q8NHW5 317 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 PIGXQ8TBF5 258 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 BRSK1Q8TDC3 778 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 MTG2Q9H4K7 406 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 THUMPD1Q9NXG2 353 aaKnown RBP6.72□□□□□ -1.33
CLCN3-211ENST00000613795 MAP10Q9P2G4 905 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 RIMKLBQ9ULI2 386 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 FARSAQ9Y285 508 aaKnown RBP6.72□□□□□ -1.33
CLCN3-211ENST00000613795 ASB4Q9Y574 426 aa6.72□□□□□ -1.33
CLCN3-211ENST00000613795 MRPL42Q9Y6G3 142 aaKnown RBP6.72□□□□□ -1.33
CLCN3-211ENST00000613795 RIIAD1A6NNX1 92 aa6.71□□□□□ -1.33
CLCN3-211ENST00000613795 KCNA5P22460 613 aa6.71□□□□□ -1.33
CLCN3-211ENST00000613795 IL4RP24394 825 aa6.71□□□□□ -1.33
CLCN3-211ENST00000613795 ECHS1P30084 290 aa6.71□□□□□ -1.33
CLCN3-211ENST00000613795 L1CAMP32004 1257 aa6.71□□□□□ -1.33
CLCN3-211ENST00000613795 CEBPGP53567 150 aa6.71□□□□□ -1.33
CLCN3-211ENST00000613795 DEFA6Q01524 100 aa6.71□□□□□ -1.33
CLCN3-211ENST00000613795 MADCAM1Q13477 382 aa6.71□□□□□ -1.33
CLCN3-211ENST00000613795 SPRED3Q2MJR0 410 aa6.71□□□□□ -1.33
CLCN3-211ENST00000613795 TEX44Q53QW1 395 aa6.71□□□□□ -1.33
CLCN3-211ENST00000613795 CERCAMQ5T4B2 595 aa6.71□□□□□ -1.33
CLCN3-211ENST00000613795 DESI1Q6ICB0 168 aa6.71□□□□□ -1.33
CLCN3-211ENST00000613795 SERPINA13PQ6UXR4 307 aa6.71□□□□□ -1.33
CLCN3-211ENST00000613795 PGAP1Q75T13 922 aa6.71□□□□□ -1.33
CLCN3-211ENST00000613795 NIPA2Q8N8Q9 360 aa6.71□□□□□ -1.33
CLCN3-211ENST00000613795 ZSCAN1Q8NBB4 408 aa6.71□□□□□ -1.33
CLCN3-211ENST00000613795 C7orf57Q8NEG2 295 aa6.71□□□□□ -1.33
CLCN3-211ENST00000613795 KCTD13Q8WZ19 329 aa6.71□□□□□ -1.33
CLCN3-211ENST00000613795 NCSTNQ92542 709 aa6.71□□□□□ -1.33
CLCN3-211ENST00000613795 TRIM43Q96BQ3 446 aaPredicted RBP6.71□□□□□ -1.33
CLCN3-211ENST00000613795 PYURFQ96I23 114 aa6.71□□□□□ -1.33
CLCN3-211ENST00000613795 ZNF599Q96NL3 588 aa6.71□□□□□ -1.33
CLCN3-211ENST00000613795 ARPC5LQ9BPX5 153 aa6.71□□□□□ -1.33
CLCN3-211ENST00000613795 ZNF436Q9C0F3 470 aaPredicted RBP6.71□□□□□ -1.33
CLCN3-211ENST00000613795 MFSD1Q9H3U5 465 aa6.71□□□□□ -1.33
CLCN3-211ENST00000613795 RNF121Q9H920 327 aa6.71□□□□□ -1.33
CLCN3-211ENST00000613795 GPN2Q9H9Y4 310 aaPredicted RBP6.71□□□□□ -1.33
CLCN3-211ENST00000613795 ACTR10Q9NZ32 417 aa6.71□□□□□ -1.33
CLCN3-211ENST00000613795 NDOR1Q9UHB4 597 aa6.71□□□□□ -1.33
CLCN3-211ENST00000613795 MYOCOSA0A1B0GUC4 107 aa6.71□□□□□ -1.33
CLCN3-211ENST00000613795 A0A1B0GVC2 190 aa6.71□□□□□ -1.33
CLCN3-211ENST00000613795 ANKRD34BA5PLL1 514 aa6.71□□□□□ -1.33
CLCN3-211ENST00000613795 C5orf51A6NDU8 294 aa6.71□□□□□ -1.33
CLCN3-211ENST00000613795 SULT1C2O00338 296 aa6.71□□□□□ -1.33
CLCN3-211ENST00000613795 FOXD2O60548 495 aaPredicted RBP6.71□□□□□ -1.33
CLCN3-211ENST00000613795 ARF4P18085 180 aaPredicted RBP6.71□□□□□ -1.33
CLCN3-211ENST00000613795 CD6P30203 668 aa6.71□□□□□ -1.33
CLCN3-211ENST00000613795 RPL4P36578 427 aaKnown RBP6.71□□□□□ -1.33
CLCN3-211ENST00000613795 RPS5P46782 204 aaKnown RBP6.71□□□□□ -1.33
CLCN3-211ENST00000613795 MTPNP58546 118 aa6.71□□□□□ -1.33
CLCN3-211ENST00000613795 BEX3Q00994 111 aa6.71□□□□□ -1.33
CLCN3-211ENST00000613795 GRK1Q15835 563 aa6.71□□□□□ -1.33
CLCN3-211ENST00000613795 ZNF311Q5JNZ3 666 aa6.71□□□□□ -1.33
CLCN3-211ENST00000613795 NKAPLQ5M9Q1 402 aa6.71□□□□□ -1.33
CLCN3-211ENST00000613795 TAPT1Q6NXT6 567 aa6.71□□□□□ -1.33
CLCN3-211ENST00000613795 FAM98AQ8NCA5 519 aaKnown RBP6.71□□□□□ -1.33
CLCN3-211ENST00000613795 WDR48Q8TAF3 677 aa6.71□□□□□ -1.33
CLCN3-211ENST00000613795 GTPBP3Q969Y2 492 aaKnown RBP6.71□□□□□ -1.33
CLCN3-211ENST00000613795 NEDD4LQ96PU5 975 aa6.71□□□□□ -1.33
CLCN3-211ENST00000613795 TMEM175Q9BSA9 504 aa6.71□□□□□ -1.33
CLCN3-211ENST00000613795 C14orf119Q9NWQ9 140 aa6.71□□□□□ -1.33
CLCN3-211ENST00000613795 SMPD4Q9NXE4 827 aa6.71□□□□□ -1.33
CLCN3-211ENST00000613795 SEC14L3Q9UDX4 400 aa6.71□□□□□ -1.33
CLCN3-211ENST00000613795 KCNN3Q9UGI6 736 aa6.71□□□□□ -1.33
CLCN3-211ENST00000613795 A0A1W2PP18 115 aa6.71□□□□□ -1.34
CLCN3-211ENST00000613795 OR10H2O60403 315 aa6.71□□□□□ -1.34
CLCN3-211ENST00000613795 NME6O75414 186 aaPredicted RBP6.71□□□□□ -1.34
CLCN3-211ENST00000613795 LRCH4O75427 683 aa6.71□□□□□ -1.34
CLCN3-211ENST00000613795 ARL6IP5O75915 188 aa6.71□□□□□ -1.34
CLCN3-211ENST00000613795 NDST3O95803 873 aa6.71□□□□□ -1.34
CLCN3-211ENST00000613795 HLA-DQA2P01906 255 aa6.71□□□□□ -1.34
CLCN3-211ENST00000613795 C8GP07360 202 aa6.71□□□□□ -1.34
CLCN3-211ENST00000613795 RAB3BP20337 219 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms