RNA–Protein interactions for RNA: ENST00000613524.4

SYCP1-209, Transcript of synaptonemal complex protein 1, humanhuman

TSL 1 (best) BASIC

Gene SYCP1, Length 3,034 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-209ENST00000613524 METTL27Q8N6F8 245 aaPredicted RBP4.83□□□□□ -1.64
SYCP1-209ENST00000613524 MGARPQ8TDB4 240 aa4.83□□□□□ -1.64
SYCP1-209ENST00000613524 UTP4Q969X6 686 aaKnown RBP4.83□□□□□ -1.64
SYCP1-209ENST00000613524 RUNDC3BQ96NL0 473 aa4.83□□□□□ -1.64
SYCP1-209ENST00000613524 TRIB3Q96RU7 358 aa4.83□□□□□ -1.64
SYCP1-209ENST00000613524 COPS8Q99627 209 aa4.83□□□□□ -1.64
SYCP1-209ENST00000613524 RTKNQ9BST9 563 aa4.83□□□□□ -1.64
SYCP1-209ENST00000613524 STMN4Q9H169 189 aaPredicted RBP4.83□□□□□ -1.64
SYCP1-209ENST00000613524 LRRC40Q9H9A6 602 aa4.83□□□□□ -1.64
SYCP1-209ENST00000613524 PAK5Q9P286 719 aa4.83□□□□□ -1.64
SYCP1-209ENST00000613524 TMPRSS11EQ9UL52 423 aa4.83□□□□□ -1.64
SYCP1-209ENST00000613524 CLCA2Q9UQC9 943 aa4.83□□□□□ -1.64
SYCP1-209ENST00000613524 CFAP46Q8IYW2 2715 aa4.83□□□□□ -1.64
SYCP1-209ENST00000613524 FAM234BA2RU67 622 aa4.83□□□□□ -1.64
SYCP1-209ENST00000613524 E5RI56 91 aa4.83□□□□□ -1.64
SYCP1-209ENST00000613524 FAM229AH3BQW9 127 aa4.83□□□□□ -1.64
SYCP1-209ENST00000613524 NIPSNAP2O75323 286 aa4.83□□□□□ -1.64
SYCP1-209ENST00000613524 SH3BGRLO75368 114 aa4.83□□□□□ -1.64
SYCP1-209ENST00000613524 AP2A1O95782 977 aa4.83□□□□□ -1.64
SYCP1-209ENST00000613524 TTC4O95801 387 aa4.83□□□□□ -1.64
SYCP1-209ENST00000613524 CCL4P13236 92 aa4.83□□□□□ -1.64
SYCP1-209ENST00000613524 CEACAM1P13688 526 aa4.83□□□□□ -1.64
SYCP1-209ENST00000613524 POLR2CP19387 275 aaPredicted RBP4.83□□□□□ -1.64
SYCP1-209ENST00000613524 CAPN3P20807 821 aa4.83□□□□□ -1.64
SYCP1-209ENST00000613524 KELP23276 732 aa4.83□□□□□ -1.64
SYCP1-209ENST00000613524 PAX7P23759 505 aa4.83□□□□□ -1.64
SYCP1-209ENST00000613524 FOXN2P32314 431 aa4.83□□□□□ -1.64
SYCP1-209ENST00000613524 STT3AP46977 705 aa4.83□□□□□ -1.64
SYCP1-209ENST00000613524 LSSP48449 732 aa4.83□□□□□ -1.64
SYCP1-209ENST00000613524 CYP4F2P78329 520 aa4.83□□□□□ -1.64
SYCP1-209ENST00000613524 CDH17Q12864 832 aa4.83□□□□□ -1.64
SYCP1-209ENST00000613524 PDIA2Q13087 525 aaKnown RBP4.83□□□□□ -1.64
SYCP1-209ENST00000613524 PTK6Q13882 451 aa4.83□□□□□ -1.64
SYCP1-209ENST00000613524 TRIM25Q14258 630 aaKnown RBP4.83□□□□□ -1.64
SYCP1-209ENST00000613524 SEMA3AQ14563 771 aa4.83□□□□□ -1.64
SYCP1-209ENST00000613524 CCNG2Q16589 344 aa4.83□□□□□ -1.64
SYCP1-209ENST00000613524 KYNUQ16719 465 aa4.83□□□□□ -1.64
SYCP1-209ENST00000613524 NEK5Q6P3R8 708 aa4.83□□□□□ -1.64
SYCP1-209ENST00000613524 RANBP10Q6VN20 620 aa4.83□□□□□ -1.64
SYCP1-209ENST00000613524 CERS6Q6ZMG9 384 aa4.83□□□□□ -1.64
SYCP1-209ENST00000613524 SPATA21Q7Z572 469 aa4.83□□□□□ -1.64
SYCP1-209ENST00000613524 ADCK2Q7Z695 626 aa4.83□□□□□ -1.64
SYCP1-209ENST00000613524 TECPR1Q7Z6L1 1165 aa4.83□□□□□ -1.64
SYCP1-209ENST00000613524 ADGRG6Q86SQ4 1221 aa4.83□□□□□ -1.64
SYCP1-209ENST00000613524 VASH2Q86V25 355 aa4.83□□□□□ -1.64
SYCP1-209ENST00000613524 AMZ2Q86W34 360 aa4.83□□□□□ -1.64
SYCP1-209ENST00000613524 MYLK4Q86YV6 388 aaPredicted RBP4.83□□□□□ -1.64
SYCP1-209ENST00000613524 PRSS58Q8IYP2 241 aa4.83□□□□□ -1.64
SYCP1-209ENST00000613524 NAGSQ8N159 534 aa4.83□□□□□ -1.64
SYCP1-209ENST00000613524 VWA5B2Q8N398 1253 aa4.83□□□□□ -1.64
SYCP1-209ENST00000613524 ARL14Q8N4G2 192 aa4.83□□□□□ -1.64
SYCP1-209ENST00000613524 KIF2BQ8N4N8 673 aa4.83□□□□□ -1.64
SYCP1-209ENST00000613524 OXR1Q8N573 874 aa4.83□□□□□ -1.64
SYCP1-209ENST00000613524 DNAJB8Q8NHS0 232 aa4.83□□□□□ -1.64
SYCP1-209ENST00000613524 RSC1A1Q92681 617 aa4.83□□□□□ -1.64
SYCP1-209ENST00000613524 THOC1Q96FV9 657 aaKnown RBP4.83□□□□□ -1.64
SYCP1-209ENST00000613524 CDKN2AIPNLQ96HQ2 116 aa4.83□□□□□ -1.64
SYCP1-209ENST00000613524 UBXN10Q96LJ8 280 aa4.83□□□□□ -1.64
SYCP1-209ENST00000613524 GFM1Q96RP9 751 aaKnown RBP4.83□□□□□ -1.64
SYCP1-209ENST00000613524 NSRP1Q9H0G5 558 aaKnown RBP4.83□□□□□ -1.64
SYCP1-209ENST00000613524 WWP1Q9H0M0 922 aa4.83□□□□□ -1.64
SYCP1-209ENST00000613524 ZMAT4Q9H898 229 aa4.83□□□□□ -1.64
SYCP1-209ENST00000613524 MLXIPLQ9NP71 852 aa4.83□□□□□ -1.64
SYCP1-209ENST00000613524 SMYD2Q9NRG4 433 aa4.83□□□□□ -1.64
SYCP1-209ENST00000613524 HOMER3Q9NSC5 361 aa4.83□□□□□ -1.64
SYCP1-209ENST00000613524 SOHLH2Q9NX45 425 aa4.83□□□□□ -1.64
SYCP1-209ENST00000613524 NINJ2Q9NZG7 142 aa4.83□□□□□ -1.64
SYCP1-209ENST00000613524 IL17CQ9P0M4 197 aa4.83□□□□□ -1.64
SYCP1-209ENST00000613524 LRFN1Q9P244 771 aa4.83□□□□□ -1.64
SYCP1-209ENST00000613524 LGALS13Q9UHV8 139 aa4.83□□□□□ -1.64
SYCP1-209ENST00000613524 SATB2Q9UPW6 733 aa4.83□□□□□ -1.64
SYCP1-209ENST00000613524 ASF1AQ9Y294 204 aa4.83□□□□□ -1.64
SYCP1-209ENST00000613524 ARL2BPQ9Y2Y0 163 aa4.83□□□□□ -1.64
SYCP1-209ENST00000613524 U3KQE9 123 aa4.83□□□□□ -1.64
SYCP1-209ENST00000613524 SCN3AQ9NY46 2000 aa4.82□□□□□ -1.64
SYCP1-209ENST00000613524 NCF1BA6NI72 391 aaPredicted RBP4.82□□□□□ -1.64
SYCP1-209ENST00000613524 NCF1CA8MVU1 366 aaPredicted RBP4.82□□□□□ -1.64
SYCP1-209ENST00000613524 FFAR3O14843 346 aa4.82□□□□□ -1.64
SYCP1-209ENST00000613524 GPR42O15529 346 aa4.82□□□□□ -1.64
SYCP1-209ENST00000613524 TNFSF14O43557 240 aa4.82□□□□□ -1.64
SYCP1-209ENST00000613524 LDB2O43679 373 aa4.82□□□□□ -1.64
SYCP1-209ENST00000613524 B3GALT2O43825 422 aa4.82□□□□□ -1.64
SYCP1-209ENST00000613524 SUN1O94901 812 aa4.82□□□□□ -1.64
SYCP1-209ENST00000613524 ALX3O95076 343 aa4.82□□□□□ -1.64
SYCP1-209ENST00000613524 SLC35G4P0C7Q5 338 aa4.82□□□□□ -1.64
SYCP1-209ENST00000613524 NCF1P14598 390 aaPredicted RBP4.82□□□□□ -1.64
SYCP1-209ENST00000613524 CKMT2P17540 419 aa4.82□□□□□ -1.64
SYCP1-209ENST00000613524 CTSSP25774 331 aa4.82□□□□□ -1.64
SYCP1-209ENST00000613524 ITPKBP27987 946 aa4.82□□□□□ -1.64
SYCP1-209ENST00000613524 GCAP28676 217 aa4.82□□□□□ -1.64
SYCP1-209ENST00000613524 HMGCLP35914 325 aa4.82□□□□□ -1.64
SYCP1-209ENST00000613524 ARL1P40616 181 aaPredicted RBP4.82□□□□□ -1.64
SYCP1-209ENST00000613524 BCL6P41182 706 aa4.82□□□□□ -1.64
SYCP1-209ENST00000613524 ARL4DP49703 201 aa4.82□□□□□ -1.64
SYCP1-209ENST00000613524 CLNS1AP54105 237 aaKnown RBP4.82□□□□□ -1.64
SYCP1-209ENST00000613524 MAP4K2Q12851 820 aa4.82□□□□□ -1.64
SYCP1-209ENST00000613524 LAPTM5Q13571 262 aa4.82□□□□□ -1.64
SYCP1-209ENST00000613524 PEX6Q13608 980 aa4.82□□□□□ -1.64
SYCP1-209ENST00000613524 NR0B2Q15466 257 aa4.82□□□□□ -1.64
SYCP1-209ENST00000613524 ZC3H12BQ5HYM0 836 aaKnown RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms