RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 CDH1P12830 882 aa16.04■□□□□ 0.16
CNOT3-208ENST00000613073 SPNP16150 400 aa16.04■□□□□ 0.16
CNOT3-208ENST00000613073 SLC6A2P23975 617 aa16.04■□□□□ 0.16
CNOT3-208ENST00000613073 GSTM2P28161 218 aa16.04■□□□□ 0.16
CNOT3-208ENST00000613073 PHC1P78364 1004 aa16.04■□□□□ 0.16
CNOT3-208ENST00000613073 B4GALNT1Q00973 533 aa16.04■□□□□ 0.16
CNOT3-208ENST00000613073 ADPRMQ3LIE5 342 aa16.04■□□□□ 0.16
CNOT3-208ENST00000613073 LCN8Q6JVE9 175 aa16.04■□□□□ 0.16
CNOT3-208ENST00000613073 IL27RAQ6UWB1 636 aa16.04■□□□□ 0.16
CNOT3-208ENST00000613073 PAGE2Q7Z2X7 111 aa16.04■□□□□ 0.16
CNOT3-208ENST00000613073 CBARPQ8N350 705 aaPredicted RBP16.04■□□□□ 0.16
CNOT3-208ENST00000613073 SKA2Q8WVK7 121 aaPredicted RBP16.04■□□□□ 0.16
CNOT3-208ENST00000613073 ZNF382Q96SR6 550 aa16.04■□□□□ 0.16
CNOT3-208ENST00000613073 COPS8Q99627 209 aa16.04■□□□□ 0.16
CNOT3-208ENST00000613073 DKK3Q9UBP4 350 aa16.04■□□□□ 0.16
CNOT3-208ENST00000613073 PMF1-BGLAPU3KQ54 211 aa16.04■□□□□ 0.16
CNOT3-208ENST00000613073 FXYD1O00168 92 aa16.04■□□□□ 0.16
CNOT3-208ENST00000613073 PFKLP17858 780 aa16.04■□□□□ 0.16
CNOT3-208ENST00000613073 RECQLP46063 649 aaPredicted RBP16.04■□□□□ 0.16
CNOT3-208ENST00000613073 GP2P55259 537 aaKnown RBP16.04■□□□□ 0.16
CNOT3-208ENST00000613073 UFM1P61960 85 aa16.04■□□□□ 0.16
CNOT3-208ENST00000613073 NCS1P62166 190 aa16.04■□□□□ 0.16
CNOT3-208ENST00000613073 ZNF77Q15935 545 aa16.04■□□□□ 0.16
CNOT3-208ENST00000613073 LYPLAL1Q5VWZ2 237 aa16.04■□□□□ 0.16
CNOT3-208ENST00000613073 GDPD4Q6W3E5 623 aa16.04■□□□□ 0.16
CNOT3-208ENST00000613073 MACC1Q6ZN28 852 aa16.04■□□□□ 0.16
CNOT3-208ENST00000613073 THAP5Q7Z6K1 395 aa16.04■□□□□ 0.16
CNOT3-208ENST00000613073 FNDC5Q8NAU1 212 aa16.04■□□□□ 0.16
CNOT3-208ENST00000613073 MINDY2Q8NBR6 621 aa16.04■□□□□ 0.16
CNOT3-208ENST00000613073 S100ZQ8WXG8 99 aa16.04■□□□□ 0.16
CNOT3-208ENST00000613073 SCAMP4Q969E2 229 aa16.04■□□□□ 0.16
CNOT3-208ENST00000613073 CHID1Q9BWS9 393 aa16.04■□□□□ 0.16
CNOT3-208ENST00000613073 GPR45Q9Y5Y3 372 aa16.04■□□□□ 0.16
CNOT3-208ENST00000613073 NOBOXO60393 691 aa16.03■□□□□ 0.16
CNOT3-208ENST00000613073 MFN2O95140 757 aa16.03■□□□□ 0.16
CNOT3-208ENST00000613073 CEBPBP17676 345 aa16.03■□□□□ 0.16
CNOT3-208ENST00000613073 POLR2EP19388 210 aaKnown RBP16.03■□□□□ 0.16
CNOT3-208ENST00000613073 CD40LGP29965 261 aa16.03■□□□□ 0.16
CNOT3-208ENST00000613073 NSG1P42857 185 aa16.03■□□□□ 0.16
CNOT3-208ENST00000613073 CLK3P49761 638 aaKnown RBP16.03■□□□□ 0.16
CNOT3-208ENST00000613073 GSK3BP49841 420 aa16.03■□□□□ 0.16
CNOT3-208ENST00000613073 RACK1P63244 317 aaKnown RBP16.03■□□□□ 0.16
CNOT3-208ENST00000613073 XKR7Q5GH72 579 aa16.03■□□□□ 0.16
CNOT3-208ENST00000613073 HS3ST5Q8IZT8 346 aa16.03■□□□□ 0.16
CNOT3-208ENST00000613073 MCCC1Q96RQ3 725 aaPredicted RBP16.03■□□□□ 0.16
CNOT3-208ENST00000613073 NUSAP1Q9BXS6 441 aaKnown RBP16.03■□□□□ 0.16
CNOT3-208ENST00000613073 YTHDF1Q9BYJ9 559 aaKnown RBP16.03■□□□□ 0.16
CNOT3-208ENST00000613073 CPEB1Q9BZB8 566 aaKnown RBP16.03■□□□□ 0.16
CNOT3-208ENST00000613073 SMURF2Q9HAU4 748 aa16.03■□□□□ 0.16
CNOT3-208ENST00000613073 WWOXQ9NZC7 414 aa16.03■□□□□ 0.16
CNOT3-208ENST00000613073 NDUFAF1Q9Y375 327 aa16.03■□□□□ 0.16
CNOT3-208ENST00000613073 BOLA1Q9Y3E2 137 aa16.03■□□□□ 0.16
CNOT3-208ENST00000613073 SNX5Q9Y5X3 404 aa16.03■□□□□ 0.16
CNOT3-208ENST00000613073 LINC01553A4QN01 128 aa16.03■□□□□ 0.16
CNOT3-208ENST00000613073 FFAR3O14843 346 aa16.03■□□□□ 0.16
CNOT3-208ENST00000613073 GPR42O15529 346 aa16.03■□□□□ 0.16
CNOT3-208ENST00000613073 LEFTY1O75610 366 aa16.03■□□□□ 0.16
CNOT3-208ENST00000613073 KCNK2O95069 426 aa16.03■□□□□ 0.16
CNOT3-208ENST00000613073 CXCR2P25025 360 aa16.03■□□□□ 0.16
CNOT3-208ENST00000613073 ARSFP54793 590 aa16.03■□□□□ 0.16
CNOT3-208ENST00000613073 HSPA14Q0VDF9 509 aa16.03■□□□□ 0.16
CNOT3-208ENST00000613073 PCBP2Q15366 365 aaKnown RBP eCLIP16.03■□□□□ 0.162e-8■■■□□ 16.4
CNOT3-208ENST00000613073 ARSIQ5FYB1 569 aa16.03■□□□□ 0.16
CNOT3-208ENST00000613073 CCDC81Q6ZN84 652 aa16.03■□□□□ 0.16
CNOT3-208ENST00000613073 Q6ZSR9 355 aa16.03■□□□□ 0.16
CNOT3-208ENST00000613073 GALNT13Q8IUC8 556 aa16.03■□□□□ 0.16
CNOT3-208ENST00000613073 NUDT8Q8WV74 236 aa16.03■□□□□ 0.16
CNOT3-208ENST00000613073 LRRC3BQ96PB8 259 aa16.03■□□□□ 0.16
CNOT3-208ENST00000613073 ZDHHC3Q9NYG2 299 aa16.03■□□□□ 0.16
CNOT3-208ENST00000613073 FAM8A1Q9UBU6 413 aa16.03■□□□□ 0.16
CNOT3-208ENST00000613073 AASSQ9UDR5 926 aa16.03■□□□□ 0.16
CNOT3-208ENST00000613073 ERVW-1Q9UQF0 538 aa16.03■□□□□ 0.16
CNOT3-208ENST00000613073 OARD1Q9Y530 152 aa16.03■□□□□ 0.16
CNOT3-208ENST00000613073 ANGPTL3Q9Y5C1 460 aa16.03■□□□□ 0.16
CNOT3-208ENST00000613073 TNPO3Q9Y5L0 923 aaKnown RBP16.03■□□□□ 0.16
CNOT3-208ENST00000613073 IDH3BO43837 385 aa16.02■□□□□ 0.16
CNOT3-208ENST00000613073 NDUFS2O75306 463 aa16.02■□□□□ 0.16
CNOT3-208ENST00000613073 VPS4BO75351 444 aa16.02■□□□□ 0.16
CNOT3-208ENST00000613073 DDX6P26196 483 aaKnown RBP eCLIP16.02■□□□□ 0.163e-7■■■□□ 16.7
CNOT3-208ENST00000613073 CCR7P32248 378 aa16.02■□□□□ 0.16
CNOT3-208ENST00000613073 SPINT3P49223 89 aa16.02■□□□□ 0.16
CNOT3-208ENST00000613073 ARHGEF7Q14155 803 aa16.02■□□□□ 0.16
CNOT3-208ENST00000613073 C6orf136Q5SQH8 315 aa16.02■□□□□ 0.16
CNOT3-208ENST00000613073 C8orf59Q8N0T1 100 aaPredicted RBP16.02■□□□□ 0.16
CNOT3-208ENST00000613073 SP7Q8TDD2 431 aaPredicted RBP16.02■□□□□ 0.16
CNOT3-208ENST00000613073 ELMO1Q92556 727 aa16.02■□□□□ 0.16
CNOT3-208ENST00000613073 KCTD14Q9BQ13 255 aaPredicted RBP16.02■□□□□ 0.16
CNOT3-208ENST00000613073 TOR3AQ9H497 397 aa16.02■□□□□ 0.16
CNOT3-208ENST00000613073 ALG2Q9H553 416 aa16.02■□□□□ 0.16
CNOT3-208ENST00000613073 THG1LQ9NWX6 298 aaKnown RBP16.02■□□□□ 0.16
CNOT3-208ENST00000613073 TMPRSS11EQ9UL52 423 aa16.02■□□□□ 0.16
CNOT3-208ENST00000613073 PDE10AQ9Y233 779 aa16.02■□□□□ 0.16
CNOT3-208ENST00000613073 CARD8Q9Y2G2 431 aa16.02■□□□□ 0.16
CNOT3-208ENST00000613073 AGAP14A8MT82 685 aa16.02■□□□□ 0.15
CNOT3-208ENST00000613073 XPNPEP2O43895 674 aa16.02■□□□□ 0.15
CNOT3-208ENST00000613073 PRR35P0CG20 571 aa16.02■□□□□ 0.15
CNOT3-208ENST00000613073 EN2P19622 333 aaPredicted RBP16.02■□□□□ 0.15
CNOT3-208ENST00000613073 AKT1P31749 480 aa16.02■□□□□ 0.15
CNOT3-208ENST00000613073 TRPC1P48995 793 aa16.02■□□□□ 0.15
CNOT3-208ENST00000613073 SKIV2LQ15477 1246 aaKnown RBP16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms