RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 DEFB107AQ8IZN7 70 aa20.86■□□□□ 0.93
USP6NL-204ENST00000606752 SLC22A18ASQ8N1D0 253 aa20.86■□□□□ 0.93
USP6NL-204ENST00000606752 C2orf73Q8N5S3 287 aaPredicted RBP20.86■□□□□ 0.93
USP6NL-204ENST00000606752 FAM174AQ8TBP5 190 aa20.86■□□□□ 0.93
USP6NL-204ENST00000606752 TSPEARQ8WU66 669 aa20.86■□□□□ 0.93
USP6NL-204ENST00000606752 SLC5A11Q8WWX8 675 aa20.86■□□□□ 0.93
USP6NL-204ENST00000606752 SMPDL3AQ92484 453 aa20.86■□□□□ 0.93
USP6NL-204ENST00000606752 NPAS2Q99743 824 aa20.86■□□□□ 0.93
USP6NL-204ENST00000606752 ORAI3Q9BRQ5 295 aa20.86■□□□□ 0.93
USP6NL-204ENST00000606752 EFCAB11Q9BUY7 163 aa20.86■□□□□ 0.93
USP6NL-204ENST00000606752 TMEM168Q9H0V1 697 aa20.86■□□□□ 0.93
USP6NL-204ENST00000606752 NDE1Q9NXR1 346 aa20.86■□□□□ 0.93
USP6NL-204ENST00000606752 PCOLCE2Q9UKZ9 415 aa20.86■□□□□ 0.93
USP6NL-204ENST00000606752 EIF3LQ9Y262 564 aaKnown RBP20.86■□□□□ 0.93
USP6NL-204ENST00000606752 HEBP2Q9Y5Z4 205 aa20.86■□□□□ 0.93
USP6NL-204ENST00000606752 NRP2O60462 931 aa20.85■□□□□ 0.93
USP6NL-204ENST00000606752 SLC22A3O75751 556 aa20.85■□□□□ 0.93
USP6NL-204ENST00000606752 AK4P27144 223 aaPredicted RBP20.85■□□□□ 0.93
USP6NL-204ENST00000606752 RAP1GDS1P52306 607 aa20.85■□□□□ 0.93
USP6NL-204ENST00000606752 CATSPEREQ5SY80 951 aa20.85■□□□□ 0.93
USP6NL-204ENST00000606752 BLOC1S3Q6QNY0 202 aa20.85■□□□□ 0.93
USP6NL-204ENST00000606752 NXPE4Q6UWF7 544 aa20.85■□□□□ 0.93
USP6NL-204ENST00000606752 SCUBE1Q8IWY4 988 aa20.85■□□□□ 0.93
USP6NL-204ENST00000606752 PARP9Q8IXQ6 854 aa20.85■□□□□ 0.93
USP6NL-204ENST00000606752 SNX19Q92543 992 aa20.85■□□□□ 0.93
USP6NL-204ENST00000606752 PCBD2Q9H0N5 130 aa20.85■□□□□ 0.93
USP6NL-204ENST00000606752 PCED1AQ9H1Q7 454 aa20.85■□□□□ 0.93
USP6NL-204ENST00000606752 SCHIP1Q9P0W5 487 aaPredicted RBP20.85■□□□□ 0.93
USP6NL-204ENST00000606752 SH2B3Q9UQQ2 575 aa20.85■□□□□ 0.93
USP6NL-204ENST00000606752 SIT1Q9Y3P8 196 aa20.85■□□□□ 0.93
USP6NL-204ENST00000606752 FBP2O00757 339 aa20.85■□□□□ 0.93
USP6NL-204ENST00000606752 TNFP01375 233 aa20.85■□□□□ 0.93
USP6NL-204ENST00000606752 G6PDP11413 515 aa20.85■□□□□ 0.93
USP6NL-204ENST00000606752 MTHFD1P11586 935 aaKnown RBP20.85■□□□□ 0.93
USP6NL-204ENST00000606752 UFM1P61960 85 aa20.85■□□□□ 0.93
USP6NL-204ENST00000606752 CSTF3Q12996 717 aaKnown RBP20.85■□□□□ 0.93
USP6NL-204ENST00000606752 KIAA0040Q15053 153 aa20.85■□□□□ 0.93
USP6NL-204ENST00000606752 PAGE2BQ5JRK9 111 aa20.85■□□□□ 0.93
USP6NL-204ENST00000606752 MED27Q6P2C8 311 aa20.85■□□□□ 0.93
USP6NL-204ENST00000606752 CYP20A1Q6UW02 462 aa20.85■□□□□ 0.93
USP6NL-204ENST00000606752 LPCAT2Q7L5N7 544 aa20.85■□□□□ 0.93
USP6NL-204ENST00000606752 ULK2Q8IYT8 1036 aa20.85■□□□□ 0.93
USP6NL-204ENST00000606752 OR7G3Q8NG95 312 aa20.85■□□□□ 0.93
USP6NL-204ENST00000606752 CCL4L1Q8NHW4 92 aa20.85■□□□□ 0.93
USP6NL-204ENST00000606752 CMTM7Q96FZ5 175 aa20.85■□□□□ 0.93
USP6NL-204ENST00000606752 RAB11FIP5Q9BXF6 653 aa20.85■□□□□ 0.93
USP6NL-204ENST00000606752 GPR27Q9NS67 375 aa20.85■□□□□ 0.93
USP6NL-204ENST00000606752 ASIC5Q9NY37 505 aa20.85■□□□□ 0.93
USP6NL-204ENST00000606752 COLEC10Q9Y6Z7 277 aa20.85■□□□□ 0.93
USP6NL-204ENST00000606752 A0A088AWK7 358 aa20.84■□□□□ 0.93
USP6NL-204ENST00000606752 BBIP1A8MTZ0 92 aa20.84■□□□□ 0.93
USP6NL-204ENST00000606752 METTL12A8MUP2 240 aa20.84■□□□□ 0.93
USP6NL-204ENST00000606752 NR5A2O00482 541 aa20.84■□□□□ 0.93
USP6NL-204ENST00000606752 THEGLP0DJG4 465 aa20.84■□□□□ 0.93
USP6NL-204ENST00000606752 HSD3B1P14060 373 aa20.84■□□□□ 0.93
USP6NL-204ENST00000606752 HSD3B2P26439 372 aa20.84■□□□□ 0.93
USP6NL-204ENST00000606752 ACTR1BP42025 376 aa20.84■□□□□ 0.93
USP6NL-204ENST00000606752 RAB28P51157 221 aa20.84■□□□□ 0.93
USP6NL-204ENST00000606752 ACTR1AP61163 376 aa20.84■□□□□ 0.93
USP6NL-204ENST00000606752 REP15Q6BDI9 236 aa20.84■□□□□ 0.93
USP6NL-204ENST00000606752 CADM4Q8NFZ8 388 aa20.84■□□□□ 0.93
USP6NL-204ENST00000606752 PROKR1Q8TCW9 393 aa20.84■□□□□ 0.93
USP6NL-204ENST00000606752 SH3KBP1Q96B97 665 aa20.84■□□□□ 0.93
USP6NL-204ENST00000606752 REPS1Q96D71 796 aa20.84■□□□□ 0.93
USP6NL-204ENST00000606752 TEX37Q96LM6 180 aa20.84■□□□□ 0.93
USP6NL-204ENST00000606752 NRTNQ99748 197 aa20.84■□□□□ 0.93
USP6NL-204ENST00000606752 POLR3HQ9Y535 204 aaPredicted RBP20.84■□□□□ 0.93
USP6NL-204ENST00000606752 SPTY2D1-AS1A0A0U1RR47 76 aa20.83■□□□□ 0.93
USP6NL-204ENST00000606752 A8MUI8 341 aa20.83■□□□□ 0.93
USP6NL-204ENST00000606752 TBL3Q12788 808 aaKnown RBP20.83■□□□□ 0.93
USP6NL-204ENST00000606752 RIPK1Q13546 671 aa20.83■□□□□ 0.93
USP6NL-204ENST00000606752 LAPTM5Q13571 262 aa20.83■□□□□ 0.93
USP6NL-204ENST00000606752 HIST2H2ACQ16777 129 aaPredicted RBP20.83■□□□□ 0.93
USP6NL-204ENST00000606752 C10orf62Q5T681 223 aaPredicted RBP20.83■□□□□ 0.93
USP6NL-204ENST00000606752 CACHD1Q5VU97 1274 aa20.83■□□□□ 0.93
USP6NL-204ENST00000606752 HIST2H2AA3Q6FI13 130 aa20.83■□□□□ 0.93
USP6NL-204ENST00000606752 PGAM4Q8N0Y7 254 aa20.83■□□□□ 0.93
USP6NL-204ENST00000606752 KLHDC7BQ96G42 594 aa20.83■□□□□ 0.93
USP6NL-204ENST00000606752 CLPTM1LQ96KA5 538 aa20.83■□□□□ 0.93
USP6NL-204ENST00000606752 MTERF1Q99551 399 aaKnown RBP20.83■□□□□ 0.93
USP6NL-204ENST00000606752 BRF2Q9HAW0 419 aa20.83■□□□□ 0.93
USP6NL-204ENST00000606752 SPATA6Q9NWH7 488 aaPredicted RBP20.83■□□□□ 0.93
USP6NL-204ENST00000606752 GEMIN8Q9NWZ8 242 aaKnown RBP20.83■□□□□ 0.93
USP6NL-204ENST00000606752 MUTYHQ9UIF7 546 aa20.83■□□□□ 0.93
USP6NL-204ENST00000606752 NDUFAF1Q9Y375 327 aa20.83■□□□□ 0.93
USP6NL-204ENST00000606752 KDM1AO60341 852 aa20.83■□□□□ 0.92
USP6NL-204ENST00000606752 NDUFS1P28331 727 aa20.83■□□□□ 0.92
USP6NL-204ENST00000606752 CXCL12P48061 93 aa20.83■□□□□ 0.92
USP6NL-204ENST00000606752 RCAN2Q14206 197 aa20.83■□□□□ 0.92
USP6NL-204ENST00000606752 SLBPQ14493 270 aaKnown RBP eCLIP20.83■□□□□ 0.92
USP6NL-204ENST00000606752 VPS26BQ4G0F5 336 aa20.83■□□□□ 0.92
USP6NL-204ENST00000606752 SLC30A9Q6PML9 568 aa20.83■□□□□ 0.92
USP6NL-204ENST00000606752 C17orf64Q86WR6 236 aa20.83■□□□□ 0.92
USP6NL-204ENST00000606752 LINC01555Q8NAE3 123 aa20.83■□□□□ 0.92
USP6NL-204ENST00000606752 OR52E1Q8NGJ3 308 aa20.83■□□□□ 0.92
USP6NL-204ENST00000606752 ACAT2Q9BWD1 397 aa20.83■□□□□ 0.92
USP6NL-204ENST00000606752 SLC52A3Q9NQ40 469 aa20.83■□□□□ 0.92
USP6NL-204ENST00000606752 AASDHPPTQ9NRN7 309 aa20.83■□□□□ 0.92
USP6NL-204ENST00000606752 VPS29Q9UBQ0 182 aa20.83■□□□□ 0.92
USP6NL-204ENST00000606752 TAC3Q9UHF0 121 aa20.83■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms