RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 FLNCQ14315 2725 aa17.33■□□□□ 0.36
CCDC12-208ENST00000603885 OR2A25A4D2G3 310 aa17.33■□□□□ 0.36
CCDC12-208ENST00000603885 A6NL46 340 aa17.33■□□□□ 0.36
CCDC12-208ENST00000603885 CCNDBP1O95273 360 aa17.33■□□□□ 0.36
CCDC12-208ENST00000603885 SLC16A8O95907 504 aa17.33■□□□□ 0.36
CCDC12-208ENST00000603885 SYF2O95926 243 aaKnown RBP17.33■□□□□ 0.36
CCDC12-208ENST00000603885 ONECUT2O95948 504 aa17.33■□□□□ 0.36
CCDC12-208ENST00000603885 ALBP02768 609 aa17.33■□□□□ 0.36
CCDC12-208ENST00000603885 ITGAXP20702 1163 aa17.33■□□□□ 0.36
CCDC12-208ENST00000603885 IGFBP7Q16270 282 aa17.33■□□□□ 0.36
CCDC12-208ENST00000603885 SPANXN3Q5MJ09 141 aa17.33■□□□□ 0.36
CCDC12-208ENST00000603885 WASHC2DQ5SRD0 308 aa17.33■□□□□ 0.36
CCDC12-208ENST00000603885 FRMPD2BQ6IN97 320 aa17.33■□□□□ 0.36
CCDC12-208ENST00000603885 SYDE1Q6ZW31 735 aaPredicted RBP17.33■□□□□ 0.36
CCDC12-208ENST00000603885 OVCH1Q7RTY7 1134 aa17.33■□□□□ 0.36
CCDC12-208ENST00000603885 CLEC1AQ8NC01 280 aa17.33■□□□□ 0.36
CCDC12-208ENST00000603885 C2CD4AQ8NCU7 369 aaPredicted RBP17.33■□□□□ 0.36
CCDC12-208ENST00000603885 ASB11Q8WXH4 323 aa17.33■□□□□ 0.36
CCDC12-208ENST00000603885 RUNDC3BQ96NL0 473 aa17.33■□□□□ 0.36
CCDC12-208ENST00000603885 EBNA1BP2Q99848 306 aaKnown RBP17.33■□□□□ 0.36
CCDC12-208ENST00000603885 ZFYVE21Q9BQ24 234 aa17.33■□□□□ 0.36
CCDC12-208ENST00000603885 WDR54Q9H977 334 aa17.33■□□□□ 0.36
CCDC12-208ENST00000603885 SLC6A20Q9NP91 592 aa17.33■□□□□ 0.36
CCDC12-208ENST00000603885 P4HTMQ9NXG6 502 aa17.33■□□□□ 0.36
CCDC12-208ENST00000603885 GPR83Q9NYM4 423 aa17.33■□□□□ 0.36
CCDC12-208ENST00000603885 TRMT6Q9UJA5 497 aaKnown RBP17.33■□□□□ 0.36
CCDC12-208ENST00000603885 ANKRD12Q6UB98 2062 aa17.32■□□□□ 0.36
CCDC12-208ENST00000603885 PCM1Q15154 2024 aa17.32■□□□□ 0.36
CCDC12-208ENST00000603885 HYKKA2RU49 373 aa17.32■□□□□ 0.36
CCDC12-208ENST00000603885 GFYI3L273 518 aa17.32■□□□□ 0.36
CCDC12-208ENST00000603885 EIF3FO00303 357 aaPredicted RBP17.32■□□□□ 0.36
CCDC12-208ENST00000603885 ZBTB14O43829 449 aa17.32■□□□□ 0.36
CCDC12-208ENST00000603885 NRP2O60462 931 aa17.32■□□□□ 0.36
CCDC12-208ENST00000603885 BANF1O75531 89 aa17.32■□□□□ 0.36
CCDC12-208ENST00000603885 UMODP07911 640 aa17.32■□□□□ 0.36
CCDC12-208ENST00000603885 ERVK-10P10266 1014 aa17.32■□□□□ 0.36
CCDC12-208ENST00000603885 FOXL2P58012 376 aa17.32■□□□□ 0.36
CCDC12-208ENST00000603885 YBX1P67809 324 aaKnown RBP17.32■□□□□ 0.36
CCDC12-208ENST00000603885 MORF4L2Q15014 288 aa17.32■□□□□ 0.36
CCDC12-208ENST00000603885 BBS9Q3SYG4 887 aa17.32■□□□□ 0.36
CCDC12-208ENST00000603885 MSS51Q4VC12 460 aa17.32■□□□□ 0.36
CCDC12-208ENST00000603885 DCAF10Q5QP82 559 aa17.32■□□□□ 0.36
CCDC12-208ENST00000603885 ICE2Q659A1 982 aa17.32■□□□□ 0.36
CCDC12-208ENST00000603885 LRRC8EQ6NSJ5 796 aa17.32■□□□□ 0.36
CCDC12-208ENST00000603885 UGT3A1Q6NUS8 523 aa17.32■□□□□ 0.36
CCDC12-208ENST00000603885 PPP1R32Q7Z5V6 425 aa17.32■□□□□ 0.36
CCDC12-208ENST00000603885 HPS6Q86YV9 775 aa17.32■□□□□ 0.36
CCDC12-208ENST00000603885 KLHL7Q8IXQ5 586 aa17.32■□□□□ 0.36
CCDC12-208ENST00000603885 CPNE9Q8IYJ1 553 aa17.32■□□□□ 0.36
CCDC12-208ENST00000603885 ZNF480Q8WV37 535 aa17.32■□□□□ 0.36
CCDC12-208ENST00000603885 NAPGQ99747 312 aaPredicted RBP17.32■□□□□ 0.36
CCDC12-208ENST00000603885 PLCD4Q9BRC7 762 aa17.32■□□□□ 0.36
CCDC12-208ENST00000603885 NUDT9Q9BW91 350 aa17.32■□□□□ 0.36
CCDC12-208ENST00000603885 SLC26A1Q9H2B4 701 aa17.32■□□□□ 0.36
CCDC12-208ENST00000603885 UTP6Q9NYH9 597 aaKnown RBP17.32■□□□□ 0.36
CCDC12-208ENST00000603885 ZC3H7BQ9UGR2 993 aaKnown RBP17.32■□□□□ 0.36
CCDC12-208ENST00000603885 TAC3Q9UHF0 121 aa17.32■□□□□ 0.36
CCDC12-208ENST00000603885 PCSK5Q92824 1860 aa17.32■□□□□ 0.36
CCDC12-208ENST00000603885 SPENQ96T58 3664 aaKnown RBP17.32■□□□□ 0.36
CCDC12-208ENST00000603885 LOC105369274A0A096LPK9 316 aa17.31■□□□□ 0.36
CCDC12-208ENST00000603885 LOC102723532A0A0G2JNH3 316 aa17.31■□□□□ 0.36
CCDC12-208ENST00000603885 E7ENX8 843 aa17.31■□□□□ 0.36
CCDC12-208ENST00000603885 DPM1O60762 260 aa17.31■□□□□ 0.36
CCDC12-208ENST00000603885 EIF2S1P05198 315 aaKnown RBP17.31■□□□□ 0.36
CCDC12-208ENST00000603885 IVDP26440 423 aa17.31■□□□□ 0.36
CCDC12-208ENST00000603885 OR1D4P47884 311 aa17.31■□□□□ 0.36
CCDC12-208ENST00000603885 MLLT10P55197 1068 aa17.31■□□□□ 0.36
CCDC12-208ENST00000603885 DR1Q01658 176 aa17.31■□□□□ 0.36
CCDC12-208ENST00000603885 TAP2Q03519 686 aa17.31■□□□□ 0.36
CCDC12-208ENST00000603885 PRDX1Q06830 199 aaKnown RBP17.31■□□□□ 0.36
CCDC12-208ENST00000603885 NKG7Q16617 165 aa17.31■□□□□ 0.36
CCDC12-208ENST00000603885 CYHR1Q6ZMK1 362 aa17.31■□□□□ 0.36
CCDC12-208ENST00000603885 UBE2R2Q712K3 238 aaPredicted RBP17.31■□□□□ 0.36
CCDC12-208ENST00000603885 COX15Q7KZN9 410 aa17.31■□□□□ 0.36
CCDC12-208ENST00000603885 PIWIL4Q7Z3Z4 852 aaKnown RBP17.31■□□□□ 0.36
CCDC12-208ENST00000603885 CREG2Q8IUH2 290 aa17.31■□□□□ 0.36
CCDC12-208ENST00000603885 OR4N4Q8N0Y3 316 aa17.31■□□□□ 0.36
CCDC12-208ENST00000603885 PDIK1LQ8N165 341 aa17.31■□□□□ 0.36
CCDC12-208ENST00000603885 METTL27Q8N6F8 245 aaPredicted RBP17.31■□□□□ 0.36
CCDC12-208ENST00000603885 PPFIBP2Q8ND30 876 aa17.31■□□□□ 0.36
CCDC12-208ENST00000603885 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.31■□□□□ 0.36
CCDC12-208ENST00000603885 NACC2Q96BF6 587 aa17.31■□□□□ 0.36
CCDC12-208ENST00000603885 PDLIM2Q96JY6 352 aa17.31■□□□□ 0.36
CCDC12-208ENST00000603885 NDNQ99608 321 aa17.31■□□□□ 0.36
CCDC12-208ENST00000603885 TAS2R13Q9NYV9 303 aa17.31■□□□□ 0.36
CCDC12-208ENST00000603885 NXT1Q9UKK6 140 aaKnown RBP17.31■□□□□ 0.36
CCDC12-208ENST00000603885 SAR1BQ9Y6B6 198 aa17.31■□□□□ 0.36
CCDC12-208ENST00000603885 SMAPO00193 183 aa17.3■□□□□ 0.36
CCDC12-208ENST00000603885 KLHL41O60662 606 aa17.3■□□□□ 0.36
CCDC12-208ENST00000603885 MMP11P24347 488 aa17.3■□□□□ 0.36
CCDC12-208ENST00000603885 SKIV2L2P42285 1042 aaKnown RBP17.3■□□□□ 0.36
CCDC12-208ENST00000603885 RGS4P49798 205 aa17.3■□□□□ 0.36
CCDC12-208ENST00000603885 ABATP80404 500 aa17.3■□□□□ 0.36
CCDC12-208ENST00000603885 RAPSNQ13702 412 aa17.3■□□□□ 0.36
CCDC12-208ENST00000603885 MUM1Q2TAK8 710 aa17.3■□□□□ 0.36
CCDC12-208ENST00000603885 NADK2Q4G0N4 442 aa17.3■□□□□ 0.36
CCDC12-208ENST00000603885 PRMT9Q6P2P2 845 aa17.3■□□□□ 0.36
CCDC12-208ENST00000603885 FBXO42Q6P3S6 717 aa17.3■□□□□ 0.36
CCDC12-208ENST00000603885 KIAA0408Q6ZU52 694 aa17.3■□□□□ 0.36
CCDC12-208ENST00000603885 PAQR7Q86WK9 346 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms