RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 PROM1O43490 865 aa8.65□□□□□ -1.03
COMMD3-215ENST00000602574 SSX4O60224 188 aa8.65□□□□□ -1.03
COMMD3-215ENST00000602574 DPM1O60762 260 aa8.65□□□□□ -1.03
COMMD3-215ENST00000602574 TMEM127O75204 238 aa8.65□□□□□ -1.03
COMMD3-215ENST00000602574 VPS4BO75351 444 aa8.65□□□□□ -1.03
COMMD3-215ENST00000602574 PAPSS2O95340 614 aaPredicted RBP8.65□□□□□ -1.03
COMMD3-215ENST00000602574 MT-CYBP00156 380 aaPredicted RBP8.65□□□□□ -1.03
COMMD3-215ENST00000602574 PKMP14618 531 aaKnown RBP8.65□□□□□ -1.03
COMMD3-215ENST00000602574 MAPK4P31152 587 aa8.65□□□□□ -1.03
COMMD3-215ENST00000602574 HOXA11P31270 313 aaPredicted RBP8.65□□□□□ -1.03
COMMD3-215ENST00000602574 PIK3CGP48736 1102 aa8.65□□□□□ -1.03
COMMD3-215ENST00000602574 SRSF11Q05519 484 aaKnown RBP8.65□□□□□ -1.03
COMMD3-215ENST00000602574 DRAP1Q14919 205 aaPredicted RBP8.65□□□□□ -1.03
COMMD3-215ENST00000602574 SLC35D3Q5M8T2 416 aa8.65□□□□□ -1.03
COMMD3-215ENST00000602574 SPANXN2Q5MJ10 180 aa8.65□□□□□ -1.03
COMMD3-215ENST00000602574 SYT6Q5T7P8 510 aaPredicted RBP8.65□□□□□ -1.03
COMMD3-215ENST00000602574 ARHGAP17Q68EM7 881 aa8.65□□□□□ -1.03
COMMD3-215ENST00000602574 REP15Q6BDI9 236 aa8.65□□□□□ -1.03
COMMD3-215ENST00000602574 CIAPIN1Q6FI81 312 aa8.65□□□□□ -1.03
COMMD3-215ENST00000602574 SMYD5Q6GMV2 418 aa8.65□□□□□ -1.03
COMMD3-215ENST00000602574 ZCCHC12Q6PEW1 402 aa8.65□□□□□ -1.03
COMMD3-215ENST00000602574 ADAT2Q7Z6V5 191 aaKnown RBP8.65□□□□□ -1.03
COMMD3-215ENST00000602574 SYVN1Q86TM6 617 aa8.65□□□□□ -1.03
COMMD3-215ENST00000602574 FAM131BQ86XD5 332 aa8.65□□□□□ -1.03
COMMD3-215ENST00000602574 CBR4Q8N4T8 237 aa8.65□□□□□ -1.03
COMMD3-215ENST00000602574 CERS5Q8N5B7 392 aa8.65□□□□□ -1.03
COMMD3-215ENST00000602574 POMGNT2Q8NAT1 580 aa8.65□□□□□ -1.03
COMMD3-215ENST00000602574 BVESQ8NE79 360 aa8.65□□□□□ -1.03
COMMD3-215ENST00000602574 NLGN2Q8NFZ4 835 aa8.65□□□□□ -1.03
COMMD3-215ENST00000602574 MOSPD2Q8NHP6 518 aa8.65□□□□□ -1.03
COMMD3-215ENST00000602574 BPIFB1Q8TDL5 484 aa8.65□□□□□ -1.03
COMMD3-215ENST00000602574 CA5BP1Q8WTZ4 195 aa8.65□□□□□ -1.03
COMMD3-215ENST00000602574 SLCO4A1Q96BD0 722 aa8.65□□□□□ -1.03
COMMD3-215ENST00000602574 OTUB2Q96DC9 234 aa8.65□□□□□ -1.03
COMMD3-215ENST00000602574 ZC3HAV1LQ96H79 300 aaKnown RBP8.65□□□□□ -1.03
COMMD3-215ENST00000602574 RDH12Q96NR8 316 aa8.65□□□□□ -1.03
COMMD3-215ENST00000602574 STRBPQ96SI9 672 aaKnown RBP8.65□□□□□ -1.03
COMMD3-215ENST00000602574 FAM129BQ96TA1 746 aa8.65□□□□□ -1.03
COMMD3-215ENST00000602574 HBEGFQ99075 208 aa8.65□□□□□ -1.03
COMMD3-215ENST00000602574 SDHCQ99643 169 aaPredicted RBP8.65□□□□□ -1.03
COMMD3-215ENST00000602574 BBS2Q9BXC9 721 aa8.65□□□□□ -1.03
COMMD3-215ENST00000602574 SLC26A1Q9H2B4 701 aa8.65□□□□□ -1.03
COMMD3-215ENST00000602574 ZNF768Q9H5H4 540 aaKnown RBP8.65□□□□□ -1.03
COMMD3-215ENST00000602574 ACSS3Q9H6R3 686 aa8.65□□□□□ -1.03
COMMD3-215ENST00000602574 CARS2Q9HA77 564 aaKnown RBP8.65□□□□□ -1.03
COMMD3-215ENST00000602574 MRPL47Q9HD33 250 aaKnown RBP8.65□□□□□ -1.03
COMMD3-215ENST00000602574 FAM86C1Q9NVL1 165 aa8.65□□□□□ -1.03
COMMD3-215ENST00000602574 ZNF219Q9P2Y4 722 aaPredicted RBP8.65□□□□□ -1.03
COMMD3-215ENST00000602574 METTL1Q9UBP6 276 aaKnown RBP8.65□□□□□ -1.03
COMMD3-215ENST00000602574 GPR160Q9UJ42 338 aa8.65□□□□□ -1.03
COMMD3-215ENST00000602574 ING4Q9UNL4 249 aa8.65□□□□□ -1.03
COMMD3-215ENST00000602574 CA5BQ9Y2D0 317 aa8.65□□□□□ -1.03
COMMD3-215ENST00000602574 PCDHGC4Q9Y5F7 938 aa8.65□□□□□ -1.03
COMMD3-215ENST00000602574 PCDHGA6Q9Y5G7 932 aa8.65□□□□□ -1.03
COMMD3-215ENST00000602574 PCDHGA5Q9Y5G8 931 aa8.65□□□□□ -1.03
COMMD3-215ENST00000602574 PCDHGA1Q9Y5H4 931 aa8.65□□□□□ -1.03
COMMD3-215ENST00000602574 NDUFB9Q9Y6M9 179 aa8.65□□□□□ -1.03
COMMD3-215ENST00000602574 V9GYQ6 96 aa8.65□□□□□ -1.03
COMMD3-215ENST00000602574 LOC100506127A0A0U1RQW1 187 aa8.64□□□□□ -1.03
COMMD3-215ENST00000602574 POM121BA6NF01 834 aa8.64□□□□□ -1.03
COMMD3-215ENST00000602574 C5orf52A6NGY3 159 aa8.64□□□□□ -1.03
COMMD3-215ENST00000602574 WTIPA6NIX2 430 aaPredicted RBP8.64□□□□□ -1.03
COMMD3-215ENST00000602574 H0YIN7 160 aa8.64□□□□□ -1.03
COMMD3-215ENST00000602574 PITPNM1O00562 1244 aa8.64□□□□□ -1.03
COMMD3-215ENST00000602574 LDLRAD4O15165 306 aa8.64□□□□□ -1.03
COMMD3-215ENST00000602574 MMP20O60882 483 aa8.64□□□□□ -1.03
COMMD3-215ENST00000602574 SMPD2O60906 423 aa8.64□□□□□ -1.03
COMMD3-215ENST00000602574 EFCAB14O75071 495 aa8.64□□□□□ -1.03
COMMD3-215ENST00000602574 GADD45GO95257 159 aa8.64□□□□□ -1.03
COMMD3-215ENST00000602574 PCCAP05165 728 aaPredicted RBP8.64□□□□□ -1.03
COMMD3-215ENST00000602574 OR8G3PP0DMU2 310 aa8.64□□□□□ -1.03
COMMD3-215ENST00000602574 NR2F1P10589 423 aa8.64□□□□□ -1.03
COMMD3-215ENST00000602574 PRPS1L1P21108 318 aa8.64□□□□□ -1.03
COMMD3-215ENST00000602574 RPS19P39019 145 aaKnown RBP8.64□□□□□ -1.03
COMMD3-215ENST00000602574 RENBPP51606 427 aa8.64□□□□□ -1.03
COMMD3-215ENST00000602574 SOX8P57073 446 aa8.64□□□□□ -1.03
COMMD3-215ENST00000602574 TFAMQ00059 246 aaKnown RBP8.64□□□□□ -1.03
COMMD3-215ENST00000602574 ZNF211Q13398 564 aaPredicted RBP8.64□□□□□ -1.03
COMMD3-215ENST00000602574 GANABQ14697 944 aaKnown RBP8.64□□□□□ -1.03
COMMD3-215ENST00000602574 GUCA2BQ16661 112 aa8.64□□□□□ -1.03
COMMD3-215ENST00000602574 C9orf152Q5JTZ5 239 aa8.64□□□□□ -1.03
COMMD3-215ENST00000602574 PLA2G4FQ68DD2 849 aa8.64□□□□□ -1.03
COMMD3-215ENST00000602574 RGS7BPQ6MZT1 257 aaPredicted RBP8.64□□□□□ -1.03
COMMD3-215ENST00000602574 CYP4F22Q6NT55 531 aa8.64□□□□□ -1.03
COMMD3-215ENST00000602574 CDC73Q6P1J9 531 aa8.64□□□□□ -1.03
COMMD3-215ENST00000602574 DARS2Q6PI48 645 aaKnown RBP8.64□□□□□ -1.03
COMMD3-215ENST00000602574 LRRC55Q6ZSA7 311 aa8.64□□□□□ -1.03
COMMD3-215ENST00000602574 C16orf59Q7L2K0 433 aa8.64□□□□□ -1.03
COMMD3-215ENST00000602574 KRT25Q7Z3Z0 450 aa8.64□□□□□ -1.03
COMMD3-215ENST00000602574 SPAG16Q8N0X2 631 aa8.64□□□□□ -1.03
COMMD3-215ENST00000602574 CDYL2Q8N8U2 506 aa8.64□□□□□ -1.03
COMMD3-215ENST00000602574 CEP76Q8TAP6 659 aa8.64□□□□□ -1.03
COMMD3-215ENST00000602574 SLC35G2Q8TBE7 412 aa8.64□□□□□ -1.03
COMMD3-215ENST00000602574 SNX33Q8WV41 574 aa8.64□□□□□ -1.03
COMMD3-215ENST00000602574 CYGBQ8WWM9 190 aa8.64□□□□□ -1.03
COMMD3-215ENST00000602574 BRI3BPQ8WY22 251 aa8.64□□□□□ -1.03
COMMD3-215ENST00000602574 HAS1Q92839 578 aa8.64□□□□□ -1.03
COMMD3-215ENST00000602574 COL21A1Q96P44 957 aa8.64□□□□□ -1.03
COMMD3-215ENST00000602574 NEDD4LQ96PU5 975 aa8.64□□□□□ -1.03
COMMD3-215ENST00000602574 OSBPL2Q9H1P3 480 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms